EY710682

Overview
NameEY710682
Unique NameEY710682
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length512
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710682 vs. ExPASy Swiss-Prot
Match: G3P_PODAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Podospora anserina GN=GPD PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.559e-11
Identity = 31/77 (40.26%), Postives = 46/77 (59.74%), Query Frame = 3
Query:   63 EEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 293
            E + AA +E+++ ELKGIL   ++ +VS D                 + D+ VK+++WYDNEWGYS+RV+DL   VA
Sbjct:  255 ETIKAALKEASEGELKGILGYTEDEIVSSDLNGNANSSIFDAKAGISLNDNFVKLVSWYDNEWGYSRRVLDLLSYVA 331          
BLAST of EY710682 vs. ExPASy Swiss-Prot
Match: G3P_MYCAV (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium avium GN=gapA PE=3 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 2.559e-11
Identity = 34/84 (40.48%), Postives = 47/84 (55.95%), Query Frame = 3
Query:   48 KKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANN 299
            K    E++NAAF+ +A+  LKGIL   D P+VS D                 + D+  KV++WYDNEWGYS R+VDL  +V  +
Sbjct:  256 KPASVEDINAAFKAAAEGRLKGILKYYDAPIVSSDIVTDPHSSIFDSGLTKVI-DNQAKVVSWYDNEWGYSNRLVDLVALVGKS 338          
BLAST of EY710682 vs. ExPASy Swiss-Prot
Match: G3PC_MESCR (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Mesembryanthemum crystallinum GN=GAPC PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.559e-11
Identity = 31/72 (43.06%), Postives = 44/72 (61.11%), Query Frame = 3
Query:   63 EEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 278
            E++ AA +E ++ +LKGIL   ++ LVS DF                + D+ VK+++WYDNEWGYS RVVDL
Sbjct:  258 EQIKAAIKEESEGKLKGILGYTEDDLVSTDFIGDNRSSIFDAKAGISLNDNFVKLVSWYDNEWGYSTRVVDL 329          
BLAST of EY710682 vs. ExPASy Swiss-Prot
Match: G3PC_GINBI (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Ginkgo biloba PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.559e-11
Identity = 32/91 (35.16%), Postives = 48/91 (52.75%), Query Frame = 3
Query:    6 TPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 278
            TP+           K    +E+ AA +E ++ +LKGIL   ++ +VS DF                + D+ VK+++WYDNEWGYS RV+DL
Sbjct:  242 TPDVSVVDLTVRLEKPASYDEIKAAIKEESEGKLKGILGYTEDDVVSTDFIGDNRSSIFDAKAGIALSDNFVKLVSWYDNEWGYSSRVIDL 332          
BLAST of EY710682 vs. ExPASy Swiss-Prot
Match: G3P1_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap1 PE=3 SV=4)

HSP 1 Score: 68.1662 bits (165), Expect = 2.559e-11
Identity = 34/91 (37.36%), Postives = 48/91 (52.75%), Query Frame = 3
Query:    6 TPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 278
            TP+          +K T  +E+ AA +++++  L GIL   DE +VS DF+               +  +  KV+AWYDNEWGYS RVVDL
Sbjct:  240 TPDVSVVDLTFKTAKATSYKEICAAMKQASEGSLAGILGYTDEEVVSTDFQGDTHSSIFDAGAGIELNSNFFKVVAWYDNEWGYSNRVVDL 330          
BLAST of EY710682 vs. ExPASy Swiss-Prot
Match: G3P1_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anabaena sp. (strain PCC 7120) GN=gap1 PE=1 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 2.559e-11
Identity = 34/91 (37.36%), Postives = 48/91 (52.75%), Query Frame = 3
Query:    6 TPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 278
            TP+          +K T  +E+ AA +++++  L GIL   DE +VS DF+               +  +  KV+AWYDNEWGYS RVVDL
Sbjct:  240 TPDVSVVDLTFKTAKATSYKEICAAMKQASEGSLAGILGYTDEEVVSTDFQGDTHSSIFDAGAGIELNSNFFKVVAWYDNEWGYSNRVVDL 330          
BLAST of EY710682 vs. ExPASy Swiss-Prot
Match: G3P3_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Kluyveromyces marxianus GN=GAP3 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.343e-11
Identity = 31/85 (36.47%), Postives = 50/85 (58.82%), Query Frame = 3
Query:   45 SKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANN 299
            +K    EE+ A  +++++NELKG++   ++ +VS DF                +    VK+++WYDNE+GYS RVVDL ++VA N
Sbjct:  247 AKPATYEEIKAVVKKASENELKGVMGYTEDAVVSSDFLGDTHSSIFDAAAGIQLSPQFVKLVSWYDNEFGYSTRVVDLVELVAKN 331          
BLAST of EY710682 vs. ExPASy Swiss-Prot
Match: G3P2_STAES (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gapA2 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.343e-11
Identity = 35/72 (48.61%), Postives = 44/72 (61.11%), Query Frame = 3
Query:   66 EVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLA 281
            +VN AF+ +   +L G+L V + PLVSVDF                MG + VKVIAWYDNEWGYS RVV++A
Sbjct:  257 QVNDAFKNA---DLSGVLDVEEAPLVSVDFNTNPHSAIIDSQSTMVMGQNKVKVIAWYDNEWGYSNRVVEVA 325          
BLAST of EY710682 vs. ExPASy Swiss-Prot
Match: G3P2_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluyveromyces marxianus GN=GAP2 PE=3 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 3.343e-11
Identity = 31/85 (36.47%), Postives = 50/85 (58.82%), Query Frame = 3
Query:   45 SKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANN 299
            +K    EE+ A  +++++NELKG++   ++ +VS DF                +    VK+++WYDNE+GYS RVVDL ++VA N
Sbjct:  247 AKPATYEEIKAVVKKASENELKGVMGYTEDAVVSSDFLGDTHSSIFDAAAGIQLSPQFVKLVSWYDNEFGYSTRVVDLVELVAKN 331          
BLAST of EY710682 vs. ExPASy Swiss-Prot
Match: G3P_XANFL (Glyceraldehyde-3-phosphate dehydrogenase OS=Xanthobacter flavus GN=gap PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.365e-11
Identity = 34/92 (36.96%), Postives = 46/92 (50.00%), Query Frame = 3
Query:    6 TPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLA 281
            TPN           + T  EE+N A   +A  +LKGIL   D+P VS+DF                M   +V+V++WYDNEWG+S R+ D A
Sbjct:  237 TPNVSVIDLKFVAKRATSKEEINEAIIAAASQQLKGILGFTDQPNVSIDFNHNPNSSTFHLDQTKVMEGTLVRVLSWYDNEWGFSNRMSDTA 328          
The following BLAST results are available for this feature:
BLAST of EY710682 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
G3P_PODAN2.559e-1140.26Glyceraldehyde-3-phosphate dehydrogenase OS=Podosp... [more]
G3P_MYCAV2.559e-1140.48Glyceraldehyde-3-phosphate dehydrogenase OS=Mycoba... [more]
G3PC_MESCR2.559e-1143.06Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_GINBI2.559e-1135.16Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P1_ANAVT2.559e-1137.36Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anab... [more]
G3P1_ANASP2.559e-1137.36Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anab... [more]
G3P3_KLUMA3.343e-1136.47Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Kluy... [more]
G3P2_STAES3.343e-1148.61Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Stap... [more]
G3P2_KLUMA3.343e-1136.47Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluy... [more]
G3P_XANFL4.365e-1136.96Glyceraldehyde-3-phosphate dehydrogenase OS=Xantho... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-086-A06-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710682 ID=EY710682; Name=EY710682; organism=Citrus sinensis; type=EST; length=512bp
GTGCCACACCAAACGTCTCGGTTGTTGATCTTGTCGTTCAGGTGTCGAAG
AAAACCTTCGCAGAAGAGGTGAACGCCGCTTTCAGAGAAAGCGCTGACAA
TGAACTGAAAGGGATCCTCTCCGTGTGCGACGAGCCCCTCGTTTCGGTCG
ACTTCAGGTGCTCTGATGTATCCTCAACCGTTGATTCATCTCTCACACTT
GTCATGGGAGACGACATGGTTAAGGTGATTGCATGGTATGACAATGAATG
GGGTTACTCTCAAAGGGTTGTGGATTTGGCCGACATTGTTGCCAACAACT
GGAAGTGAAGTAAATACTAAAATCGGAACTCGGCTGTAATCGGCACAACG
ATGTTCTTGTTTTTCATTTTTGGTTCCCCCATTTATTGTTCTGCGTCTTA
GAATTTGTAGAGTGGATAACACTATCTTATTATGGAACCTTTTTCCTTTG
CCTGTCATTAATCCTTATGCAATAAAATTCTTTAATTAAAGTTGATAAAA
AAAAAAAAAAAA
back to top