EY710682

Overview
NameEY710682
Unique NameEY710682
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length512
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710682 vs. ExPASy Swiss-Prot
Match: G3PC_CRAPL (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Craterostigma plantagineum GN=GAPC PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.365e-11
Identity = 32/78 (41.03%), Postives = 45/78 (57.69%), Query Frame = 3
Query:   45 SKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 278
            +K+   +E+ AA +E ++ +LKGIL   +E +VS DF                +    VK++AWYDNEWGYS RVVDL
Sbjct:  252 AKEASYDEIKAAIKEESEGKLKGILGYTEEDVVSSDFVGDSRSSIFDAKAGIALSKKFVKIVAWYDNEWGYSSRVVDL 329          
BLAST of EY710682 vs. ExPASy Swiss-Prot
Match: G3P_DROHY (Glyceraldehyde-3-phosphate dehydrogenase OS=Drosophila hydei GN=Gapdh1 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.701e-11
Identity = 35/91 (38.46%), Postives = 46/91 (50.55%), Query Frame = 3
Query:    6 TPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 278
            TPN           K    +E+ A  +E+A+  LKGIL   DE +VS DF                + D  VK+I+WYDNE+GYS RV+DL
Sbjct:  234 TPNVSVVDLTVRLGKGASYDEIKAKVQEAANGPLKGILGYTDEEVVSTDFLSDTHSSVFEPKAGISLNDKFVKLISWYDNEFGYSNRVIDL 324          
BLAST of EY710682 vs. ExPASy Swiss-Prot
Match: G3P_COCP7 (Glyceraldehyde-3-phosphate dehydrogenase OS=Coccidioides posadasii (strain C735) GN=GPD PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.701e-11
Identity = 30/82 (36.59%), Postives = 47/82 (57.32%), Query Frame = 3
Query:   48 KKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 293
            K    +++  A ++++ NELKGI+S  ++ LVS D                 + D  +K++AWYDNEWGYS+RV+DL   +A
Sbjct:  250 KSVTYDQIKEAMKKASANELKGIMSYSEDALVSSDLNGDPHSCIFDATAGIALNDHFIKLVAWYDNEWGYSRRVIDLIAYIA 331          
BLAST of EY710682 vs. ExPASy Swiss-Prot
Match: G3P_COCIM (Glyceraldehyde-3-phosphate dehydrogenase OS=Coccidioides immitis GN=GPD PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.701e-11
Identity = 30/82 (36.59%), Postives = 47/82 (57.32%), Query Frame = 3
Query:   48 KKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 293
            K    +++  A ++++ NELKGI+S  ++ LVS D                 + D  +K++AWYDNEWGYS+RV+DL   +A
Sbjct:  250 KSVTYDQIKEAMKKASANELKGIMSYSEDALVSSDLNGDTHSCIFDATAGIALNDHFIKLVAWYDNEWGYSRRVIDLIAYIA 331          
BLAST of EY710682 vs. ExPASy Swiss-Prot
Match: G3P_ASPNG (Glyceraldehyde-3-phosphate dehydrogenase OS=Aspergillus niger GN=gpdA PE=3 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 5.701e-11
Identity = 30/77 (38.96%), Postives = 46/77 (59.74%), Query Frame = 3
Query:   48 KKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 278
            K T  +E+  A +++++NELKGIL   ++ +VS D                 +  + VK+++WYDNEWGYS+RVVDL
Sbjct:  250 KATSYDEIKKALKDASENELKGILGYTEDDIVSSDLNGDDHSSIFDAKAGIALNSNFVKLVSWYDNEWGYSRRVVDL 326          
BLAST of EY710682 vs. ExPASy Swiss-Prot
Match: G3PC_RANAC (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Ranunculus acris GN=GAPC PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.701e-11
Identity = 31/77 (40.26%), Postives = 45/77 (58.44%), Query Frame = 3
Query:   48 KKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 278
            KK    ++ AA +E ++ +LKGIL   ++ +VS DF                + D+ VK+++WYDNEWGYS RVVDL
Sbjct:  254 KKATYADIKAAIKEESEGKLKGILGYTEDDVVSTDFIGDNRSSIFDAKAGIALNDNCVKLVSWYDNEWGYSSRVVDL 330          
BLAST of EY710682 vs. ExPASy Swiss-Prot
Match: G3PC_DIACA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Dianthus caryophyllus GN=GAPC PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.701e-11
Identity = 30/72 (41.67%), Postives = 44/72 (61.11%), Query Frame = 3
Query:   63 EEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 278
            E+V AA +E ++ +LKGIL   ++ +VS DF                + D+ +K+++WYDNEWGYS RVVDL
Sbjct:  258 EQVKAAIKEESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALNDNFIKLVSWYDNEWGYSTRVVDL 329          
BLAST of EY710682 vs. ExPASy Swiss-Prot
Match: G3P2_DROPS (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Drosophila pseudoobscura pseudoobscura GN=Gapdh2 PE=2 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 5.701e-11
Identity = 35/91 (38.46%), Postives = 46/91 (50.55%), Query Frame = 3
Query:    6 TPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 278
            TPN           K    +E+ A  +E+A+  LKGIL   DE +VS DF                + D  VK+I+WYDNE+GYS RV+DL
Sbjct:  234 TPNVSVVDLTVRLGKGASYDEIKAKVQEAANGPLKGILGYTDEEVVSTDFLSDTHSSVFDAKAGISLNDKFVKLISWYDNEFGYSNRVIDL 324          
BLAST of EY710682 vs. ExPASy Swiss-Prot
Match: G3P2_DROME (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Drosophila melanogaster GN=Gapdh2 PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 5.701e-11
Identity = 35/91 (38.46%), Postives = 46/91 (50.55%), Query Frame = 3
Query:    6 TPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 278
            TPN           K    +E+ A  +E+A+  LKGIL   DE +VS DF                + D  VK+I+WYDNE+GYS RV+DL
Sbjct:  234 TPNVSVVDLTVRLGKGASYDEIKAKVQEAANGPLKGILGYTDEEVVSTDFLSDTHSSVFDAKAGISLNDKFVKLISWYDNEFGYSNRVIDL 324          
BLAST of EY710682 vs. ExPASy Swiss-Prot
Match: G3P_THEAQ (Glyceraldehyde-3-phosphate dehydrogenase OS=Thermus aquaticus GN=gap PE=1 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 7.446e-11
Identity = 34/81 (41.98%), Postives = 48/81 (59.26%), Query Frame = 3
Query:   48 KKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIV 290
            ++  AEEVNAA + +A+  LKGIL+  ++ +V  D                 +G+ MVKV AWYDNEWGY+ RV DL ++V
Sbjct:  247 REVTAEEVNAALKAAAEGPLKGILAYTEDEIVLQDIVMDPHSSIVDAKLTKALGN-MVKVFAWYDNEWGYANRVADLVELV 326          
The following BLAST results are available for this feature:
BLAST of EY710682 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
G3PC_CRAPL4.365e-1141.03Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_DROHY5.701e-1138.46Glyceraldehyde-3-phosphate dehydrogenase OS=Drosop... [more]
G3P_COCP75.701e-1136.59Glyceraldehyde-3-phosphate dehydrogenase OS=Coccid... [more]
G3P_COCIM5.701e-1136.59Glyceraldehyde-3-phosphate dehydrogenase OS=Coccid... [more]
G3P_ASPNG5.701e-1138.96Glyceraldehyde-3-phosphate dehydrogenase OS=Asperg... [more]
G3PC_RANAC5.701e-1140.26Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_DIACA5.701e-1141.67Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P2_DROPS5.701e-1138.46Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Dros... [more]
G3P2_DROME5.701e-1138.46Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Dros... [more]
G3P_THEAQ7.446e-1141.98Glyceraldehyde-3-phosphate dehydrogenase OS=Thermu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-086-A06-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710682 ID=EY710682; Name=EY710682; organism=Citrus sinensis; type=EST; length=512bp
GTGCCACACCAAACGTCTCGGTTGTTGATCTTGTCGTTCAGGTGTCGAAG
AAAACCTTCGCAGAAGAGGTGAACGCCGCTTTCAGAGAAAGCGCTGACAA
TGAACTGAAAGGGATCCTCTCCGTGTGCGACGAGCCCCTCGTTTCGGTCG
ACTTCAGGTGCTCTGATGTATCCTCAACCGTTGATTCATCTCTCACACTT
GTCATGGGAGACGACATGGTTAAGGTGATTGCATGGTATGACAATGAATG
GGGTTACTCTCAAAGGGTTGTGGATTTGGCCGACATTGTTGCCAACAACT
GGAAGTGAAGTAAATACTAAAATCGGAACTCGGCTGTAATCGGCACAACG
ATGTTCTTGTTTTTCATTTTTGGTTCCCCCATTTATTGTTCTGCGTCTTA
GAATTTGTAGAGTGGATAACACTATCTTATTATGGAACCTTTTTCCTTTG
CCTGTCATTAATCCTTATGCAATAAAATTCTTTAATTAAAGTTGATAAAA
AAAAAAAAAAAA
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