EY710670
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY710670 vs. ExPASy Swiss-Prot
Match: RBS2_SPIOL (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Spinacia oleracea GN=RBCS2 PE=1 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 1.085e-35 Identity = 90/188 (47.87%), Postives = 117/188 (62.23%), Query Frame = 1 Query: 1 ASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGMGV---P*APQVTRILRWTLLDNVESWPMYGCTDATPGFEGGWGRVQKENPLSFVRNYRN*KQRRPGCRGSVSLLPKPPRG 555 ASS++SSA VAT +R AQASMVAPFTGLKS+ FPATKK N+DITS+ASNGGRVQCMKVWP +K++ETLSYLPPL+ + L ++++YL+ + W+PCLEFE + G +P WT+ PM+GCTD +KE P +F+R R+ C VS + P G Sbjct: 2 ASSVLSSAAVATVSRTP-AQASMVAPFTGLKSTVGFPATKK-NDDITSLASNGGRVQCMKVWPTQNMKRYETLSYLPPLTTDQLARQVDYLLNNKWVPCLEFETDHGFVYREHHNSPGYYDGRYWTMW----KLPMFGCTDPAQVL-NELEECKKEYPNAFIRIIGFDSNRQVQC---VSFIAYKPAG 179
BLAST of EY710670 vs. ExPASy Swiss-Prot
Match: RBS5_LEMGI (Ribulose bisphosphate carboxylase small chain SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 5.386e-35 Identity = 79/142 (55.63%), Postives = 100/142 (70.42%), Query Frame = 1 Query: 1 ASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGM--GVP*APQVTRILRWTLLDNVESWPMYGCTDAT 420 ASSM++S A RA AQ+SMVAPF GL+SS AFPAT+K NND++++ SNGGRV CM+VWPP GLKKFETLSYLPPLS E L KE++YL+R+ W+PC+EF E + +P WT+ PM+GCTDA+ Sbjct: 2 ASSMMAST--AAVARAGPAQSSMVAPFNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMW----KLPMFGCTDAS 137
BLAST of EY710670 vs. ExPASy Swiss-Prot
Match: RBS6_LEMGI (Ribulose bisphosphate carboxylase small chain SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 4.560e-34 Identity = 77/142 (54.23%), Postives = 98/142 (69.01%), Query Frame = 1 Query: 1 ASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGM--GVP*APQVTRILRWTLLDNVESWPMYGCTDAT 420 ASSM++S A R AQ +MVAPF GL+SS AFPAT+K NND++++ SNGGRV CM+VWPP GLKKFETLSYLPPLS E L KE++YL+R+ W+PC+EF E + +P WT+ PM+GCTDA+ Sbjct: 2 ASSMMAST--AAVARVGPAQTNMVAPFNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMW----KLPMFGCTDAS 137
BLAST of EY710670 vs. ExPASy Swiss-Prot
Match: RBS7_FLAPR (Ribulose bisphosphate carboxylase small chain 7, chloroplastic OS=Flaveria pringlei GN=RBCS7 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.956e-33 Identity = 77/151 (50.99%), Postives = 103/151 (68.21%), Query Frame = 1 Query: 37 ANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGMGV---P*APQVTRILRWTLLDNVESWPMYGCTDATPGFEGGWGRVQKENPLSFVR 480 A A++AQA+MVAPFTGLKS++AFP TKK N D +++ASNGGRVQCMKVWPP G K++ETLSYLP L++ L KE++YL+R+ W+PCLEFELE G +P WT+ PM+GCTD+ + +KE P +++R Sbjct: 6 ATVATVAQANMVAPFTGLKSNAAFPVTKKVN-DFSTLASNGGRVQCMKVWPPLGKKRYETLSYLPNLTEVQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMW----KLPMFGCTDSAQVMK-ELQECKKEYPQAWIR 150
BLAST of EY710670 vs. ExPASy Swiss-Prot
Match: RBS2_LEMGI (Ribulose bisphosphate carboxylase small chain SSU26, chloroplastic OS=Lemna gibba GN=SSU26 PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 5.041e-33 Identity = 75/142 (52.82%), Postives = 99/142 (69.72%), Query Frame = 1 Query: 1 ASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGM--GVP*APQVTRILRWTLLDNVESWPMYGCTDAT 420 ASSM++S A RA AQ++MVAPF GL+SS AFPAT+K N +++++ SNGG+V CM+VWPP GLKKFETLSYLPPLS E L KE++YL+R+ W+PC+EF E + +P WT+ PM+GCTDA+ Sbjct: 2 ASSMMAST--AAVARAGPAQSNMVAPFNGLRSSVAFPATRKANKNLSTLPSNGGKVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMW----KLPMFGCTDAS 137
BLAST of EY710670 vs. ExPASy Swiss-Prot
Match: RBS3_FLAPR (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Flaveria pringlei GN=RBCS3 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 6.584e-33 Identity = 76/151 (50.33%), Postives = 102/151 (67.55%), Query Frame = 1 Query: 37 ANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGMGV---P*APQVTRILRWTLLDNVESWPMYGCTDATPGFEGGWGRVQKENPLSFVR 480 A A++AQA+MVAPFTGLKS++AFP TKK N D +++ SNGGRVQCMKVWPP G K++ETLSYLP L++ L KE++YL+R+ W+PCLEFELE G +P WT+ PM+GCTD+ + +KE P +++R Sbjct: 6 ATVATVAQANMVAPFTGLKSNAAFPVTKKVN-DFSTLPSNGGRVQCMKVWPPLGKKRYETLSYLPNLTESQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMW----KLPMFGCTDSAQVMK-ELQECKKEYPQAWIR 150
BLAST of EY710670 vs. ExPASy Swiss-Prot
Match: RBS1_FLAPR (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Flaveria pringlei GN=RBCS1 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 8.599e-33 Identity = 76/151 (50.33%), Postives = 102/151 (67.55%), Query Frame = 1 Query: 37 ANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGMGV---P*APQVTRILRWTLLDNVESWPMYGCTDATPGFEGGWGRVQKENPLSFVR 480 A A++AQA+MVAPFTGLK+++AFP TKK N D +++ SNGGRVQCMKVWPP G KK+ETLSYLP L++ L KE++YL+R+ W+PCLEFELE G +P WT+ PM+GCTD+ + +KE P +++R Sbjct: 6 ATVATVAQANMVAPFTGLKANAAFPVTKKVN-DFSTLPSNGGRVQCMKVWPPLGKKKYETLSYLPDLTEVQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMW----KLPMFGCTDSAQVMK-ELQECKKEYPQAWIR 150
BLAST of EY710670 vs. ExPASy Swiss-Prot
Match: RBS5_FLAPR (Ribulose bisphosphate carboxylase small chain 5, chloroplastic OS=Flaveria pringlei GN=RBCS5 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.123e-32 Identity = 76/151 (50.33%), Postives = 102/151 (67.55%), Query Frame = 1 Query: 37 ANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGMGV---P*APQVTRILRWTLLDNVESWPMYGCTDATPGFEGGWGRVQKENPLSFVR 480 A A++AQA+MVAPFTGLKS++AFP TKK N D +++ SNGGRVQCMKVWPP G K++ETLSYLP L++ L KE++YL+R+ W+PCLEFELE G +P WT+ PM+GCTD+ + +KE P +++R Sbjct: 6 ATVATVAQANMVAPFTGLKSNAAFPVTKKVN-DFSTLPSNGGRVQCMKVWPPLGKKRYETLSYLPNLTEVQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMW----KLPMFGCTDSAQVMK-ELQECKKEYPQAWIR 150
BLAST of EY710670 vs. ExPASy Swiss-Prot
Match: RBS6_FLAPR (Ribulose bisphosphate carboxylase small chain 6, chloroplastic OS=Flaveria pringlei GN=RBCS6 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 4.268e-32 Identity = 75/151 (49.67%), Postives = 101/151 (66.89%), Query Frame = 1 Query: 37 ANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGMGV---P*APQVTRILRWTLLDNVESWPMYGCTDATPGFEGGWGRVQKENPLSFVR 480 A A++AQA+MVAPFTGLK+++AFP TKK N D +++ SNGGRVQCMKVWPP G KK+ TLSYLP L++ L KE++YL+R+ W+PCLEFELE G +P WT+ PM+GCTD+ + +KE P +++R Sbjct: 6 ATVAAVAQANMVAPFTGLKANAAFPVTKKVN-DFSTLPSNGGRVQCMKVWPPLGKKKYXTLSYLPNLTEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMW----KLPMFGCTDSVQVMK-ELQECKKEYPQAWIR 150
BLAST of EY710670 vs. ExPASy Swiss-Prot
Match: RBS4_LEMGI (Ribulose bisphosphate carboxylase small chain SSU40B, chloroplastic OS=Lemna gibba GN=SSU40B PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.242e-31 Identity = 75/142 (52.82%), Postives = 96/142 (67.61%), Query Frame = 1 Query: 1 ASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGM--GVP*APQVTRILRWTLLDNVESWPMYGCTDAT 420 ASSM++S A A RA AQ +MV PF +SS FPAT+K NND++++ SNGGRV CM+VWPP GLKKFETLSYLPPLS E L KE++YL+R+ W+PC+EF E + +P WT+ PM+GCTDA+ Sbjct: 2 ASSMMASTAAAVA-RAGPAQTNMV-PFNACRSSVPFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMW----KLPMFGCTDAS 137 The following BLAST results are available for this feature:
BLAST of EY710670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >EY710670 ID=EY710670; Name=EY710670; organism=Citrus sinensis; type=EST; length=1043bpback to top |