EY710668

Overview
NameEY710668
Unique NameEY710668
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1061
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710668 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.710e-52
Identity = 96/116 (82.76%), Postives = 104/116 (89.66%), Query Frame = 3
Query:   96 FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGIKFG 437
            F G AV L+PS +E++  G+  MRKT +K+  VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG+KFG
Sbjct:   13 FAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 128          
BLAST of EY710668 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 2.234e-52
Identity = 97/112 (86.61%), Postives = 102/112 (91.07%), Query Frame = 3
Query:  102 GKAVNLAPSGNELSNGGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGIKFG 437
            GKAV L PS  E+   GR+SMRKT +K VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNG+KFG
Sbjct:   16 GKAVKLGPSAPEV---GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG 124          
BLAST of EY710668 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 3.810e-52
Identity = 107/176 (60.80%), Postives = 123/176 (69.89%), Query Frame = 3
Query:   96 FVGKAVNLAPSGNELSNGGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGIKFG*G---PCGSR---------AGSPNLQRGAGLKLTWGKTQALNPSPEEF-LANLG-LGQGESL 581
            F GKAV L+P  +E+   GR++MRKT   +  SGSPWYG DRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPELLARNG+KFG       GS+          G+P+L     +   W     L  + E + +A  G LG+ E L
Sbjct:   13 FAGKAVKLSPGASEVFGTGRVTMRKTVKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGEGPLGEAEDL 188          
BLAST of EY710668 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 4.976e-52
Identity = 95/116 (81.90%), Postives = 104/116 (89.66%), Query Frame = 3
Query:   96 FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGIKFG 437
            F GKAV  +PS +E++  G+ +MRKT +K+  VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG+KFG
Sbjct:   13 FAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 128          
BLAST of EY710668 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 8.488e-52
Identity = 96/114 (84.21%), Postives = 102/114 (89.47%), Query Frame = 3
Query:  102 GKAVNLAPSGNELSNGGRISMRKTASK--SVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGIKFG 437
            GKAV L P+ +E+   GRI+MRKTA K  +V S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG+KFG
Sbjct:   15 GKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 128          
BLAST of EY710668 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.891e-51
Identity = 95/116 (81.90%), Postives = 105/116 (90.52%), Query Frame = 3
Query:   96 FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGIKFG 437
            F GKAVN+ PS ++++  G+ +MRKT +K+  VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNG+KFG
Sbjct:   13 FAGKAVNV-PSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFG 127          
BLAST of EY710668 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 7.186e-51
Identity = 92/96 (95.83%), Postives = 95/96 (98.96%), Query Frame = 3
Query:  150 GRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGIKFG 437
            GR+SMRKTASK+VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNG+KFG
Sbjct:   11 GRVSMRKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG 106          
BLAST of EY710668 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 9.385e-51
Identity = 93/116 (80.17%), Postives = 102/116 (87.93%), Query Frame = 3
Query:   96 FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGIKFG 437
            F GKAV L+ S +E++  G+++MRKT +K+   SS SPWYGPDRVKYLGPFSGE PSYLTGEFP DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNGIKFG
Sbjct:   13 FAGKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFG 128          
BLAST of EY710668 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 9.385e-51
Identity = 106/177 (59.89%), Postives = 122/177 (68.93%), Query Frame = 3
Query:   96 FVGKAVNLAPSGNELSNGGRISMRKTASKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGIKFG*G---PCGSR---------AGSPNLQRGAGLKLTWGKTQALNPSPEEF--LANLGLGQGESL 581
            F GKAVNL+P+ +E+   GR++MRKT +K    SGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLARNG+KFG       GS+          G+P+L     +   W     L  + E +    N  LG+ E L
Sbjct:   13 FAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDL 189          
BLAST of EY710668 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 1.226e-50
Identity = 93/116 (80.17%), Postives = 104/116 (89.66%), Query Frame = 3
Query:   96 FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGIKFG 437
            F GKAVN+ PS +E++  G+++MRKT +K+  VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADP TFAKNR+LEVIHCRW MLGALGCVFPEL ARNG+KFG
Sbjct:   13 FAGKAVNV-PSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFG 127          
The following BLAST results are available for this feature:
BLAST of EY710668 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
CB27_TOBAC1.710e-5282.76Chlorophyll a-b binding protein 7, chloroplastic O... [more]
CB23_SOYBN2.234e-5286.61Chlorophyll a-b binding protein 3, chloroplastic O... [more]
CB21_SINAL3.810e-5260.80Chlorophyll a-b binding protein 1, chloroplastic O... [more]
CB25_PETSP4.976e-5281.90Chlorophyll a-b binding protein 91R, chloroplastic... [more]
CB2A_SPIOL8.488e-5284.21Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB24_PETSP1.891e-5181.90Chlorophyll a-b binding protein 25, chloroplastic ... [more]
CB21_SOYBN7.186e-5195.83Chlorophyll a-b binding protein, chloroplastic (Fr... [more]
CB23_PETSP9.385e-5180.17Chlorophyll a-b binding protein 22R, chloroplastic... [more]
CB21_ARATH9.385e-5159.89Chlorophyll a-b binding protein 165/180, chloropla... [more]
CB21_PETSP1.226e-5080.17Chlorophyll a-b binding protein 13, chloroplastic ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-083-G11-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710668 ID=EY710668; Name=EY710668; organism=Citrus sinensis; type=EST; length=1061bp
CTTCTCTTGCTTACACAGCTTCTCTTGCTTACCCAGCTTCTGCTTCTCAA
TTAAATTCCTCAATGGCAACCTCAACAATGGCTCTCTCCTCATCATTCGT
CGGCAAGGCCGTGAACCTCGCCCCTTCAGGCAATGAGCTAAGCAATGGTG
GCCGCATCTCCATGCGTAAAACCGCGAGCAAGTCTGTTTCTTCAGGTAGC
CCGTGGTACGGCCCAGACAGAGTCAAGTACTTGGGCCCATTCTCTGGCGA
GCCCCCAAGCTACTTGACCGGTGAGTTCCCTGGCGACTACGGTTGGGACA
CAGCCGGGCTTTCAGCTGACCCAGAAACCTTTGCCAAGAACCGTGAACTC
GAAGTCATCCACTGCAGATGGGCCATGTTGGGAGCTCTTGGATGCGTCTT
CCCGGAGCTCTTGGCCCGCAACGGAATCAAGTTCGGGTGAGGCCCGTGTG
GTTCAAGGGCGGGAAGCCCAAATCTTCAGCGAGGGGCGGGGCTAAAACTA
ACTTGGGGAAAAACCCAAGCTTTGAATCCCAGCCCAGAAGAATTCTTGGC
CAATCTGGGGCTTGGCCAAGGTGAGTCTTTGAAGGGGAACCCCTTAAAGG
GGTTACAGAAATAGCTGGGAGGCCCCGATCGGAAGAAGAGAAAGAAACCC
ATTGCACCCAAAGACGGAAGATTATAATACCATTTGAGGATAGAAAGAAG
GACAACCGAAGGAATATTAGACGAGCACAAAACCATACGAGAGAAAACCA
AAAAGAGGGACGAGAGCGAGACGGAATAACACTGATCAGCGATATAAGAG
AGAATACAGAGACGTAGGAAAGAAAGAGAGAGTGAAGATGAGCGAAAGGA
ACCGGAGGACAACACAGCACAGGACAAAGGAGAGGGACAAGAGCGAAAGA
CAAAAAACATGCAAACAAAAAGAATACAAGGCAAAAAAAAAATAAAGAGC
AAAAAGATGACAAAAAAATACAAAATACAAGAGAGAGAATATAACAAACA
AAAAGGAGAGCGGAAAGAGGAGAGGAAAGCACGATGCAAAAAAAGAAAAC
GAAAAAAGAAA
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