EY710668
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY710668 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 3.961e-33 Identity = 70/108 (64.81%), Postives = 80/108 (74.07%), Query Frame = 3 Query: 96 FVGKAVNLAPSGNELSNGGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 419 F+G+ N P + ++ G S R T S + WYGPDRVKYLGPFS + PSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+FPE+L + Sbjct: 19 FLGQTKNANPLRDVVAMG---SARFTMSNDL-----WYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEK 118
BLAST of EY710668 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 6.757e-33 Identity = 75/130 (57.69%), Postives = 88/130 (67.69%), Query Frame = 3 Query: 102 GKAVNLAPSGN-ELSNGGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGIKFG*GPCGSRAGSPNLQRG 485 G+A + +P + + GRI+M WYGPDRVKYLGPFS + PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGCVFPE+L + G++F P +AGS G Sbjct: 24 GRAASASPLRDIAAATNGRITM---------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFK-EPVWFKAGSQIFSEG 143
BLAST of EY710668 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.505e-32 Identity = 63/67 (94.03%), Postives = 65/67 (97.01%), Query Frame = 3 Query: 237 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGIKFG 437 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH WAMLGALGCVFPELL+RNG+KFG Sbjct: 1 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLSRNGVKFG 67
BLAST of EY710668 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 9.757e-32 Identity = 68/105 (64.76%), Postives = 79/105 (75.24%), Query Frame = 3 Query: 174 ASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGIKFG*GPCGSRAGSPNLQRG 485 A+ + S+G WYGPDR K+LGPFS P+YLTGEFPGDYGWDTAGLSADPETF K RELEVIH RWA+LGALG + PELL+ G+KFG P +AG+ G Sbjct: 29 AAPAKSAGIEWYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFG-EPVWFKAGAQIFSEG 132
BLAST of EY710668 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.664e-31 Identity = 66/95 (69.47%), Postives = 78/95 (82.11%), Query Frame = 3 Query: 165 RKTASKSV---SSGSPWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGIKFG 437 +KTA+K+ SSG +YGP+R K+LGP+S P+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH RWAMLGALGC PELLA++G KFG Sbjct: 20 KKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCQTPELLAKSGTKFG 114
BLAST of EY710668 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.193e-29 Identity = 72/113 (63.72%), Postives = 78/113 (69.03%), Query Frame = 3 Query: 99 VGKAVNLAPSGNELSNGGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGIKFG 437 + K L P + L +M K A+KS S S RVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSA PETFAKNRELEVIH R AM ALGC+FPELL+ G FG Sbjct: 20 IAKPSKLNPISSTLIVTAGFTMLKHAAKSKVSSSTC--DRRVKYLGPFSGEWPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELLSVMGQGFG 130
BLAST of EY710668 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 3.248e-27 Identity = 59/90 (65.56%), Postives = 74/90 (82.22%), Query Frame = 3 Query: 204 WYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGIKFG*GPCGSRAGS 467 +YGPDR K+LGPFS + P YLTGEFPGDYGWDTAGLSADP+TFA+ RE+E+IH RWA+LGALG + PELL++ G++FG P +AG+ Sbjct: 33 FYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFG-EPVWFKAGA 121
BLAST of EY710668 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 8.279e-23 Identity = 71/153 (46.41%), Postives = 84/153 (54.90%), Query Frame = 3 Query: 168 KTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA-RNGIKFG*GPCGSRAGSPNLQRGAGLKLTWGKTQALNPS---PEEFLANL-------GLGQGESLKGNP 593 K SKS SS + +YGPD + P TGEFPGDYGWDTAGLSADPETF + RELE+IH R +LGALG V PELLA +GIKFG +AG+ Q G G NPS + +A L GL +G + G P Sbjct: 45 KAVSKSSSSANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDG-------GLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYRVNGGP 189
BLAST of EY710668 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.672e-15 Identity = 52/117 (44.44%), Postives = 61/117 (52.14%), Query Frame = 3 Query: 117 LAPSGNELSNGGRISMRKTA---SKSVSSGSP----WYGPDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGIKFG 437 LA S + S +K A SK+VS S WYGPDR +L E P YL GE GDYG+D GL PE FAK + E+IH RWAMLGA G + PE L + G G Sbjct: 26 LASSPSTFKTVALFSKKKPAPAKSKAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCG 142
BLAST of EY710668 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.198e-13 Identity = 37/73 (50.68%), Postives = 49/73 (67.12%), Query Frame = 3 Query: 213 PDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGI 428 PDR + F G PP +L G PGD+G+D GL++DPE+ N++ E++HCRWAMLGA G PELL + GI Sbjct: 63 PDRPLW---FPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGI 132 The following BLAST results are available for this feature:
BLAST of EY710668 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >EY710668 ID=EY710668; Name=EY710668; organism=Citrus sinensis; type=EST; length=1061bpback to top |