EY710666

Overview
NameEY710666
Unique NameEY710666
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length992
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710666 vs. ExPASy Swiss-Prot
Match: DXR_SYNS3 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain CC9311) GN=dxr PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 6.972e-61
Identity = 121/204 (59.31%), Postives = 143/204 (70.10%), Query Frame = 3
Query:    3 AIFQCIQG------------LPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNXXXXXXXXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSKLGSLTFVAPDTAKYPSVNLAYAAGRAGGTMTGVLSAAYEKAVEMVIDEKIGY 578
            AIFQC+QG            +P   LRRI LTASGGAFRDW    L++  VADA  HPNWSMGKKITVDSA+L NKGLEVIEAHYLFG +YD+             MVE  DSSV+ QLGWPDM+LPI+Y MSWP R+   E  W RLDL+++G L+F APD AKYP ++LAYAAGRAGGTM  VL+AA E+AV   ++EKI +
Sbjct:  161 AIFQCLQGTPWSDTARLSTGVPTPGLRRIQLTASGGAFRDWSAADLEKATVADATSHPNWSMGKKITVDSASLMNKGLEVIEAHYLFGLDYDHIEIVIHPQSIIHSMVELADSSVLAQLGWPDMKLPILYCMSWPSRL---ETPWRRLDLTEVGQLSFRAPDPAKYPCMDLAYAAGRAGGTMPAVLNAANEEAVAQFLEEKIHF 361          
BLAST of EY710666 vs. ExPASy Swiss-Prot
Match: DXR_PROMA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus GN=dxr PE=3 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 2.029e-60
Identity = 118/204 (57.84%), Postives = 140/204 (68.63%), Query Frame = 3
Query:    3 AIFQCIQG------------LPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNXXXXXXXXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSKLGSLTFVAPDTAKYPSVNLAYAAGRAGGTMTGVLSAAYEKAVEMVIDEKIGY 578
            AIFQC+QG            +P   LR I LTASGGAFRDW  E LK   + DA  HPNWSMGKKITVDSATL NKGLEVIEAHYLFG +YD+             M+E  DSSV+ Q+GWPDM+LPI+Y MSWP RI  S   W RL+LS++G LTF  PDT+KYP + LAYAAG+A GTM  VL+AA E+AV + ++EKI +
Sbjct:  156 AIFQCLQGTPWPENARLSTGIPTPGLRNIQLTASGGAFRDWATEDLKHASIKDATSHPNWSMGKKITVDSATLMNKGLEVIEAHYLFGLDYDHIEIVIHPQSIIHSMIELNDSSVLAQMGWPDMKLPILYAMSWPNRINTS---WRRLNLSEIGKLTFHEPDTSKYPCMELAYAAGKAAGTMPAVLNAANEEAVALFLEEKIHF 356          
BLAST of EY710666 vs. ExPASy Swiss-Prot
Match: DXR_SYNPX (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain WH8102) GN=dxr PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 2.649e-60
Identity = 118/204 (57.84%), Postives = 142/204 (69.61%), Query Frame = 3
Query:    3 AIFQCIQG------------LPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNXXXXXXXXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSKLGSLTFVAPDTAKYPSVNLAYAAGRAGGTMTGVLSAAYEKAVEMVIDEKIGY 578
            AIFQC+QG            +P   LRRI LTASGGAFRDW  E L+   VADA  HPNWSMG+KITVDSA+L NKGLEVIEAHYLFG +YD+             M+E  DSSV+ QLGWPDM+LPI+Y +SWP R+   E  W RLDL+++G L+F APD AKYP + LAYAAGRAGGTM  V++AA E+AV   ++EKI +
Sbjct:  153 AIFQCLQGTPWAENARLSTGVPTPGLRRIQLTASGGAFRDWKAEDLENATVADATSHPNWSMGRKITVDSASLMNKGLEVIEAHYLFGLDYDHIEIVIHPQSIIHSMIELADSSVLAQLGWPDMKLPILYCLSWPSRL---ETPWRRLDLTEVGQLSFRAPDPAKYPCMQLAYAAGRAGGTMPAVMNAANEEAVAQFLEEKIHF 353          
BLAST of EY710666 vs. ExPASy Swiss-Prot
Match: DXR_PROMM (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain MIT 9313) GN=dxr PE=3 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 3.460e-60
Identity = 117/204 (57.35%), Postives = 143/204 (70.10%), Query Frame = 3
Query:    3 AIFQCIQG------------LPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNXXXXXXXXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSKLGSLTFVAPDTAKYPSVNLAYAAGRAGGTMTGVLSAAYEKAVEMVIDEKIGY 578
            AIFQC+QG            +P   LR I LTASGGAFRDW  + L++  +ADA  HPNWSMG+KITVDSATL NKGLEVIEAHYLFG +Y+              M+E  DSSV+GQLGWPDM+LPI+Y +SWPER+   E  W RL+L+++G LTF APDT KYP + LAYAAGRAGGTM  VL+AA E+AV   ++E+I +
Sbjct:  156 AIFQCLQGTPWAENARLSTGVPTPGLRHIQLTASGGAFRDWSAKDLEKATIADATSHPNWSMGRKITVDSATLMNKGLEVIEAHYLFGIDYNQIEIVIHPQSIIHSMIELADSSVLGQLGWPDMKLPILYCLSWPERL---ETPWRRLNLAEVGELTFRAPDTKKYPCMKLAYAAGRAGGTMPAVLNAANEEAVAQFLEERIHF 356          
BLAST of EY710666 vs. ExPASy Swiss-Prot
Match: DXR_PROMP (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=dxr PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 2.243e-59
Identity = 116/204 (56.86%), Postives = 136/204 (66.67%), Query Frame = 3
Query:    3 AIFQCIQGLPE------------GALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNXXXXXXXXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSKLGSLTFVAPDTAKYPSVNLAYAAGRAGGTMTGVLSAAYEKAVEMVIDEKIGY 578
            AIFQCIQGLP               L+ I LTASGGAFRDW VE LK V V DA  HPNWSMG+KITVDSATL NKGLEVIEAHYLFG  Y+N             M+E +DSSV+ QLGWPDM+LPI+Y MSWPER    +  W R +L+++G LTF  PD  KYP + LAY+AG+  GTM  VL+AA E AV+  + EKI +
Sbjct:  152 AIFQCIQGLPNYENADFSTGQIPNGLKAIHLTASGGAFRDWEVEDLKNVTVEDATSHPNWSMGRKITVDSATLMNKGLEVIEAHYLFGTSYENIEIAIHPQSIIHSMIEMEDSSVLAQLGWPDMKLPILYAMSWPERF---KTNWKRFNLTEIGQLTFKKPDEVKYPCMGLAYSAGKCSGTMPAVLNAANEMAVDQFLKEKISF 352          
BLAST of EY710666 vs. ExPASy Swiss-Prot
Match: DXR_SYNSC (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain CC9605) GN=dxr PE=3 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 4.997e-59
Identity = 116/204 (56.86%), Postives = 141/204 (69.12%), Query Frame = 3
Query:    3 AIFQCIQG------------LPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNXXXXXXXXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSKLGSLTFVAPDTAKYPSVNLAYAAGRAGGTMTGVLSAAYEKAVEMVIDEKIGY 578
            AIFQC+QG            +P   LRRI LTASGGAFRDW    L++  VADA  HPNWSMG+KITVDSA+L NKGLEVIEAHYLFG +YD+             M+E  DSSV+ QLGWPDM+LPI+Y +SWP R+   E  W RLDL+++G L+F APD AKYP + LAYAAG AGGTM  V++AA E+AV   ++EKI +
Sbjct:  159 AIFQCLQGTPWAENARLSTGVPTPGLRRIQLTASGGAFRDWTAADLEKATVADATSHPNWSMGRKITVDSASLMNKGLEVIEAHYLFGLDYDHIEIVIHPQSIIHSMIELADSSVLAQLGWPDMKLPILYCLSWPSRL---ETPWRRLDLTEVGQLSFRAPDPAKYPCMELAYAAGSAGGTMPAVMNAANEEAVAQFLEEKIHF 359          
BLAST of EY710666 vs. ExPASy Swiss-Prot
Match: DXR_PROM5 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain MIT 9515) GN=dxr PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 6.526e-59
Identity = 116/204 (56.86%), Postives = 134/204 (65.69%), Query Frame = 3
Query:    3 AIFQCIQGLPE------------GALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNXXXXXXXXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSKLGSLTFVAPDTAKYPSVNLAYAAGRAGGTMTGVLSAAYEKAVEMVIDEKIGY 578
            AIFQCIQGLP               L+ I LTASGGAFRDW VE LK V V DA  HPNWSMG+KITVDSATL NKGLEVIEAHYLFG  Y N             M+E +DSSV+ QLGWPDM+LPI+Y MSWPER       W R +L+++G LTF  PD  KYP + LAY+AG+  GTM  VL+AA E AV+  + EKI +
Sbjct:  157 AIFQCIQGLPNYENADFVTGQIPNGLKAIHLTASGGAFRDWAVEDLKNVTVEDATSHPNWSMGRKITVDSATLMNKGLEVIEAHYLFGTPYQNIEIVIHPQSIIHSMIEMEDSSVLAQLGWPDMKLPILYAMSWPERF---RTNWKRFNLTEIGQLTFKKPDEVKYPCMGLAYSAGKCSGTMPAVLNAANEMAVDQFLKEKISF 357          
BLAST of EY710666 vs. ExPASy Swiss-Prot
Match: DXR_SYNS9 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain CC9902) GN=dxr PE=3 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 1.113e-58
Identity = 116/204 (56.86%), Postives = 141/204 (69.12%), Query Frame = 3
Query:    3 AIFQCIQG------------LPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNXXXXXXXXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSKLGSLTFVAPDTAKYPSVNLAYAAGRAGGTMTGVLSAAYEKAVEMVIDEKIGY 578
            AIFQC+QG            +P   LRRI LTASGGAFRDW    L++  VADA  HPNWSMG+KITVDSA+L NKGLEVIEAHYLFG +YD+             MVE  DSSV+ QLGWPDM+LPI+Y +SWP R+   E  W RLDL+++G L+F APD  KYP + LAYAAGRAGGTM  V++AA E+AV   ++E+I +
Sbjct:  161 AIFQCLQGTPWADTARLSTGVPTPGLRRIQLTASGGAFRDWNAADLEKATVADATSHPNWSMGRKITVDSASLMNKGLEVIEAHYLFGLDYDHIEIVIHPQSIIHSMVEMADSSVLAQLGWPDMKLPILYCLSWPSRL---ETPWRRLDLTEVGQLSFRAPDPNKYPCMELAYAAGRAGGTMPAVMNAANEEAVAQFLEERIHF 361          
BLAST of EY710666 vs. ExPASy Swiss-Prot
Match: DXR_PROMT (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain NATL2A) GN=dxr PE=3 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 1.113e-58
Identity = 114/204 (55.88%), Postives = 138/204 (67.65%), Query Frame = 3
Query:    3 AIFQCIQG------------LPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNXXXXXXXXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSKLGSLTFVAPDTAKYPSVNLAYAAGRAGGTMTGVLSAAYEKAVEMVIDEKIGY 578
            AIFQC+QG            +P    + I LTASGGAFRDW  E L +  V DA  HPNWSMGKKITVDSATL NKGLEVIEAHYLFG  YD              MVE  DSSV+ QLGWPDM+LPI+Y +SWP R+   +  WPRL L+++G+LTF  PDT KYP + LAY+AG++GGTM  VL+AA EKAVE+ ++E+  +
Sbjct:  161 AIFQCLQGTPWADNARLSTGMPTPGFKSIQLTASGGAFRDWKAEDLVKATVEDATSHPNWSMGKKITVDSATLMNKGLEVIEAHYLFGLSYDQIEIIIHPQSIIHSMVELDDSSVLAQLGWPDMKLPILYCLSWPSRL---KTPWPRLKLTQIGNLTFKEPDTKKYPCMELAYSAGKSGGTMPAVLNAANEKAVELFLEERFKF 361          
BLAST of EY710666 vs. ExPASy Swiss-Prot
Match: DXR_PROM1 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain NATL1A) GN=dxr PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.899e-58
Identity = 114/204 (55.88%), Postives = 138/204 (67.65%), Query Frame = 3
Query:    3 AIFQCIQG------------LPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNXXXXXXXXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSKLGSLTFVAPDTAKYPSVNLAYAAGRAGGTMTGVLSAAYEKAVEMVIDEKIGY 578
            AIFQC+QG            +P    + I LTASGGAFRDW  E L +  V DA  HPNWSMGKKITVDSATL NKGLEVIEAHYLFG  YD              MVE  DSSV+ QLGWPDM+LPI+Y +SWP R+   +  WPRL L+++G+LTF  PDT KYP + LAY+AG++GGTM  VL+AA EKAVE+ ++E+  +
Sbjct:  161 AIFQCLQGTPWADNARLSTGVPTPGFKSIQLTASGGAFRDWKAEDLVKATVEDATSHPNWSMGKKITVDSATLMNKGLEVIEAHYLFGLSYDQIEIIIHPQSIIHSMVELDDSSVLAQLGWPDMKLPILYCLSWPSRL---KTPWPRLKLTQIGNLTFKEPDTNKYPCMELAYSAGKSGGTMPAVLNAANEKAVELFLEERFKF 361          
The following BLAST results are available for this feature:
BLAST of EY710666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 440
Match NameE-valueIdentityDescription
DXR_SYNS36.972e-6159.311-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_PROMA2.029e-6057.841-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_SYNPX2.649e-6057.841-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_PROMM3.460e-6057.351-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_PROMP2.243e-5956.861-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_SYNSC4.997e-5956.861-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_PROM56.526e-5956.861-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_SYNS91.113e-5856.861-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_PROMT1.113e-5855.881-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_PROM11.899e-5855.881-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-083-G09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710666 ID=EY710666; Name=EY710666; organism=Citrus sinensis; type=EST; length=992bp
CTGCCATATTTCAGTGTATTCAAGGCTTGCCTGAGGGTGCACTTCGGCGC
ATTATTTTAACTGCATCTGGTGGGGCTTTCAGGGACTGGCCGGTTGAGAA
ACTGAAAGAAGTTAAAGTGGCTGATGCATTGAAGCATCCTAACTGGAGTA
TGGGAAAAAAGATTACTGTCGATTCTGCTACCCTTTTCAACAAGGGTTTA
GAAGTAATTGAAGCCCATTACCTATTTGGAGCCGAATATGATAATATTGA
GATAATAATTCATCCACAGTCTATCATACACTCAATGGTCGAAACACAGG
ATTCTTCTGTTATTGGACAGTTGGGTTGGCCTGATATGCGCTTACCAATC
ATTTATACAATGTCTTGGCCAGAAAGAATTTACTGCTCCGAATTGACGTG
GCCTCGCCTTGATCTTTCCAAGCTTGGATCATTAACATTTGTGGCTCCTG
ACACTGCAAAATATCCATCTGTAAATCTTGCCTATGCTGCTGGACGGGCT
GGAGGCACCATGACAGGAGTTCTTAGTGCAGCTTACGAGAAAGCAGTAGA
AATGGTCATTGATGAAAAGATTGGCTATCCGGGATATTTTCAGGGTGTGG
AACCTAAGTGGTGAATAGCACAGGGGCGAATTGGATAACCTCCCCTTTCC
AAAAGGAAAAAAAACTTTAGAATGCTGGGGCCCAAAAATAAGCACGGGGT
TTGAAATTTTAAACCGGGAAAAAAACCCAGTTCCCAACTGGGTGGTTTGC
ATTAAAGGCCCCTACTTTAAAAAATTACAAAAGGGGGTTTTCTTTTTTGC
CAAAAAGTCGGGTTATTCCGCCCGTTGGCATTGGAAAGCGACTCAGGCAC
AACTGGCCCCCAAAATTAAGATAAAAAAGGGGGGGGGGAAAGGGGAGATG
TGTGGAGCTCCACCCCAATTATTCATAATGGGCGCAAGAAAAGAGAAAAA
TGAAAAGAGCTGAACACTTTGAACATAAGTAGACCAACGACG
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