EY710652

Overview
NameEY710652
Unique NameEY710652
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length989
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710652 vs. ExPASy Swiss-Prot
Match: LOX4_SOYBN (Lipoxygenase-4 OS=Glycine max GN=LOX1.5 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.943e-20
Identity = 47/104 (45.19%), Postives = 65/104 (62.50%), Query Frame = 2
Query:  197 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERK 505
            G G   Y+  FE  S FG  GA  ++N    E YLK ++L+ +PN G ++  CNSW+++  + K  R+FF N  YLPS+TP  L +YR EEL  +RG+G GERK
Sbjct:   89 GAGEQAYDVNFEWDSDFGIPGAFYIKNFMQNEFYLKSLILEDIPNHGTIHFVCNSWVYNSKNYKTDRIFFANNTYLPSETPAPLLKYREEELKNVRGDGTGERK 192          
BLAST of EY710652 vs. ExPASy Swiss-Prot
Match: LOX22_HORVU (Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.705e-18
Identity = 53/139 (38.13%), Postives = 71/139 (51.08%), Query Frame = 2
Query:  119 VSAELDPKTGLDKSTIQD---YARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVT------CNSWLHSKHDNKQKRVFF-TNKLYLPSQTPDGLKRYRAEELTILRGNGQGERK 505
            VS+ELDPKTG +   I     ++R+   D D    YE+ F         GA+ + N HH EM L ++ +      P   +      C SW+   H +  KR FF   K Y+PSQTP G+++ R  EL  LRGNG GERK
Sbjct:  118 VSSELDPKTGQEHDVISGKLKHSRETEKDYD---LYEAIFTCRHRLAPSGAVRLVNYHHTEMLLGEVKIFPAGEDPTKSSAVTLFHCQSWIDPSHCSPDKRTFFPVEKSYIPSQTPKGVEKLRKSELEALRGNGCGERK 253          

HSP 2 Score: 30.0314 bits (66), Expect = 1.705e-18
Identity = 23/68 (33.82%), Postives = 32/68 (47.06%), Query Frame = 3
Query:  504 KTYDRIYDL*CLQ*ILEDPEKKT*IYKGLCFGRQNKTPLFPKRCKTGRP--PVVATNHFFGKKKGELF 701
            K +DRIYD       L  PE K  +  G       K   +P+RC+TGRP      ++     KKGE++
Sbjct:  253 KKHDRIYDYDVYN-DLGKPESKRPVLGG-------KEHPYPRRCRTGRPRSKTDPSSEEESHKKGEMY 312          
BLAST of EY710652 vs. ExPASy Swiss-Prot
Match: LOX3_SOYBN (Seed lipoxygenase-3 OS=Glycine max GN=LOX1.3 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.220e-18
Identity = 49/129 (37.98%), Postives = 74/129 (57.36%), Query Frame = 2
Query:  125 AELDPKTGLDKST-IQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERK 505
            A+ + K  L K+T ++     +   G G   ++  FE   G G +GA  ++N    E +L  + L+ +PN G ++  CNSW+++    K  R+FF N+ YLPS+TP  L +YR EEL  LRG+G GERK
Sbjct:   68 ADANGKGKLGKATFLEGIITSLPTLGAGQSAFKINFEWDDGSGILGAFYIKNFMQTEFFLVSLTLEDIPNHGSIHFVCNSWIYNAKLFKSDRIFFANQTYLPSETPAPLVKYREEELHNLRGDGTGERK 196          

HSP 2 Score: 23.0978 bits (48), Expect = 2.220e-18
Identity = 17/50 (34.00%), Postives = 26/50 (52.00%), Query Frame = 3
Query:  504 KTYDRIYDL*CLQ*ILEDPEKKT*IYKGLCFGRQNKTPLFPKRCKTGRPP 653
            K ++R+YD       L DP+K     + +  G  N T  +P+R +TGR P
Sbjct:  196 KEWERVYDYDVYN-DLGDPDKGENHARPVLGG--NDTFPYPRRGRTGRKP 242          
BLAST of EY710652 vs. ExPASy Swiss-Prot
Match: LOXA_SOLLC (Lipoxygenase A OS=Solanum lycopersicum GN=LOX1.1 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 2.886e-18
Identity = 47/134 (35.07%), Postives = 76/134 (56.72%), Query Frame = 2
Query:  122 SAELDPKTGL-----DKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERK 505
            S + DP  GL     + + ++++   +     G   +   F+    FG  GA +++N H  E +LK + L+ +PN G V+  CNSW++     K  R+FF N+ YLPS+TP+ L++YR  EL  LRG+G G+R+
Sbjct:   59 SVQSDPANGLQGKHSNPAYLENFLLTLTPLAAGETAFGVTFDWNEEFGVPGAFVIKNMHINEFFLKSLTLEDVPNHGKVHFVCNSWVYPSFRYKSDRIFFANQPYLPSETPELLRKYRENELVTLRGDGTGKRE 192          

HSP 2 Score: 22.3274 bits (46), Expect = 2.886e-18
Identity = 7/11 (63.64%), Postives = 10/11 (90.91%), Query Frame = 3
Query:  621 FPKRCKTGRPP 653
            +P+R +TGRPP
Sbjct:  228 YPRRGRTGRPP 238          
BLAST of EY710652 vs. ExPASy Swiss-Prot
Match: LOX1_ARATH (Lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.239e-17
Identity = 46/115 (40.00%), Postives = 66/115 (57.39%), Query Frame = 2
Query:  164 IQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLP-NGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERK 505
            ++D+   I +   G   ++  F+  + FG  GA L+ N H  E  LK + L+ +P +G V+  CNSW++        RVFF+NK YLP +TP  L +YR EEL  LRG G+GE K
Sbjct:   80 LEDWITTITSLTAGESAFKVTFDYETDFGYPGAFLIRNSHFSEFLLKSLTLEDVPGHGRVHYICNSWIYPAKHYTTDRVFFSNKTYLPHETPATLLKYREEELVSLRGTGEGELK 194          
BLAST of EY710652 vs. ExPASy Swiss-Prot
Match: LOX1_SOLTU (Lipoxygenase 1 OS=Solanum tuberosum GN=LOX1.1 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.394e-17
Identity = 41/94 (43.62%), Postives = 62/94 (65.96%), Query Frame = 2
Query:  227 FEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERK 505
            F+    FG  GA +++N H  E +LK + L+ +PN G V+  CNSW++   + K  R+FF N+ YLPS+TP+ L++YR  EL  LRG+G G+R+
Sbjct:  100 FDWNEEFGVPGAFIIKNMHINEFFLKSLTLEDVPNHGKVHFVCNSWVYPSLNYKSDRIFFANQPYLPSETPELLRKYRENELLTLRGDGTGKRE 193          

HSP 2 Score: 22.7126 bits (47), Expect = 1.394e-17
Identity = 16/50 (32.00%), Postives = 25/50 (50.00%), Query Frame = 3
Query:  504 KTYDRIYDL*CLQ*ILEDPEKKT*IYKGLCFGRQNKTPLFPKRCKTGRPP 653
            + +DRIYD      +    + K  +   L  G   + P +P+R +TGRPP
Sbjct:  193 EAWDRIYDYDIYNDLGNPDQGKENVRTTL--GGSAEYP-YPRRGRTGRPP 239          
BLAST of EY710652 vs. ExPASy Swiss-Prot
Match: LOX2_PEA (Seed lipoxygenase-2 OS=Pisum sativum GN=LOX1.2 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.114e-17
Identity = 45/104 (43.27%), Postives = 60/104 (57.69%), Query Frame = 2
Query:  197 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERK 505
            G G   +   FE     G  GA  ++N    E +LK + L+ +PN G +   CNSW+++    K  R+FF NK YLPS+TP  L +YR EEL  LRG+G GERK
Sbjct:  101 GAGESAFNIHFEWDHEMGIPGAFYIKNYMQVEFFLKSLTLEDVPNHGTIRFVCNSWVYNSKLYKSPRIFFANKSYLPSETPSPLVKYREEELQTLRGDGTGERK 204          
BLAST of EY710652 vs. ExPASy Swiss-Prot
Match: LOXA_PHAVU (Lipoxygenase 1 OS=Phaseolus vulgaris GN=LOXA PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.709e-17
Identity = 51/142 (35.92%), Postives = 75/142 (52.82%), Query Frame = 2
Query:  197 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKNL**NL*FMMSTMNLGRSRKKNLNLQRPVLWKAKQNPF 619
            GD    +   FE    FG   A  ++N    E +L  + L+ +PN G ++  CNSW+++    K+ R+FF NK YLP++TP  L +YR EEL  LRG+G GERK    +  +  +  N   +  KN NL R  L  +   P+
Sbjct:  101 GDRQDAFNVYFEWDENFGIPEAFYIKNFMQSEFFLVSLTLEDIPNHGTIHFVCNSWVYNAKSYKRDRIFFANKTYLPNETPASLVKYRKEELENLRGDGTGERKEY--DRIYDYAVYNDLGNPDKNKNLARTTLGGSSDFPY 240          
BLAST of EY710652 vs. ExPASy Swiss-Prot
Match: LOX2_SOYBN (Seed lipoxygenase-2 OS=Glycine max GN=LOX1.2 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 8.032e-17
Identity = 44/104 (42.31%), Postives = 60/104 (57.69%), Query Frame = 2
Query:  197 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERK 505
            G G   +  +FE     G  GA  ++N    E YLK + L+ +PN G +   CNSW+++    K  R+FF N  Y+PS+TP  L  YR EEL  LRG+G+GERK
Sbjct:  105 GAGESAFNIQFEWDESMGIPGAFYIKNYMQVEFYLKSLTLEDVPNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETPAALVGYREEELKNLRGDGKGERK 208          
BLAST of EY710652 vs. ExPASy Swiss-Prot
Match: LOX3_PEA (Seed lipoxygenase-3 OS=Pisum sativum GN=LOX1.3 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.049e-16
Identity = 44/104 (42.31%), Postives = 60/104 (57.69%), Query Frame = 2
Query:  197 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERK 505
            G G   ++  FE     G  GA  ++N    E +L  + LD +PN G +   CNSW+++   +K  R+FF N+ YLPS+TP  L  YR EEL  LRG+G GERK
Sbjct:   96 GAGQSAFKIHFEWDDDMGIPGAFYIKNFMQTEFFLVSLTLDDIPNHGSIYFVCNSWIYNAKHHKIDRIFFANQTYLPSETPAPLVHYREEELNNLRGDGTGERK 199          
The following BLAST results are available for this feature:
BLAST of EY710652 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
LOX4_SOYBN5.943e-2045.19Lipoxygenase-4 OS=Glycine max GN=LOX1.5 PE=1 SV=1[more]
LOX22_HORVU1.705e-1838.13Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare... [more]
LOX3_SOYBN2.220e-1837.98Seed lipoxygenase-3 OS=Glycine max GN=LOX1.3 PE=1 ... [more]
LOXA_SOLLC2.886e-1835.07Lipoxygenase A OS=Solanum lycopersicum GN=LOX1.1 P... [more]
LOX1_ARATH1.239e-1740.00Lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=... [more]
LOX1_SOLTU1.394e-1743.62Lipoxygenase 1 OS=Solanum tuberosum GN=LOX1.1 PE=2... [more]
LOX2_PEA2.114e-1743.27Seed lipoxygenase-2 OS=Pisum sativum GN=LOX1.2 PE=... [more]
LOXA_PHAVU4.709e-1735.92Lipoxygenase 1 OS=Phaseolus vulgaris GN=LOXA PE=3 ... [more]
LOX2_SOYBN8.032e-1742.31Seed lipoxygenase-2 OS=Glycine max GN=LOX1.2 PE=2 ... [more]
LOX3_PEA1.049e-1642.31Seed lipoxygenase-3 OS=Pisum sativum GN=LOX1.3 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-083-F07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710652 ID=EY710652; Name=EY710652; organism=Citrus sinensis; type=EST; length=989bp
AGTTAAGGCTGTTGTTACTGTGAAACCAACTGTGGGAGGCTTCCTCTCAA
ATATTTCTTTAGACCAAGGGTTAGATGATCTTGGAGATTTGTTTGGTAAA
TCACTCCTCTTGGAGCTTGTCAGTGCTGAGCTTGACCCCAAGACGGGATT
GGATAAATCCACCATCCAAGATTATGCGCGCAAAATTGGTGCGGACGGGG
ATGGAAACATGCAATATGAATCAGAATTCGAAGTCCCATCTGGATTTGGA
GAAATTGGCGCAATATTAGTGGAAAATGAGCACCACAAAGAGATGTATTT
GAAAGATATTGTTCTTGATGGTTTGCCAAATGGTCCTGTCAACGTAACAT
GTAATTCATGGCTTCACTCAAAGCACGACAATAAACAAAAGAGAGTTTTC
TTTACCAACAAGTTGTACTTGCCATCACAAACACCAGACGGATTGAAGAG
ATATAGAGCTGAGGAGCTTACCATTTTGCGAGGTAATGGACAAGGAGAGC
GCAAAAACCTATGATAGAATCTATGATTTATGATGTCTACAATGAATCTT
GGAAGATCCAGAAAAAAAAACCTGAATTTACAAAGGCCTGTGCTTTGGAA
GGCAAAACAAAACCCCTTTATTCCCTAAACGTTGCAAAACTGGACGCCCC
CCGGTGGTGGCCACGAATCATTTTTTCGGAAAAAAAAAAGGGGAACTTTT
TTTTGTTTCCCAGGGGGATGGAAACCTTTCTCCGGAAGGTAAAGGCCAAC
CTAAATTTTTCAGCCAAAAACGGGGGAACCCCGGGGTTGCCTGGCTTTGG
GTACCCTCCCCTTTAAAACCCCCCCTTTTGCACGATCCCGGTTTCGGGGG
GGTTTACCATACTTTTCCCTGTGGAATTGGGAAGCCCCCTCTCTTCAATG
GGAAAAGAGAGTCCCCTTTTTGCCCCGCCCCCCCCCACTAACAAAGGGAA
GGAGGGGGGTTTTTTTGTGGGGAAAACACACACCGCGCG
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