EY710542

Overview
NameEY710542
Unique NameEY710542
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1024
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710542 vs. ExPASy Swiss-Prot
Match: NDK_PELTS (Nucleoside diphosphate kinase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=ndk PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.972e-22
Identity = 53/106 (50.00%), Postives = 69/106 (65.09%), Query Frame = 3
Query:  303 VEETYIMVKPDGVQRGLVGEIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVGASARKL*GSTDPPQAEPGKIKGDPG 620
            +E TY+M+KPDGVQRGLVGEII+RFE            +  ++LAE+HY +   KPFF  L+ YITS PVV M  EG     +AR++ G+TDP +A PG I+G  G
Sbjct:    1 MERTYLMIKPDGVQRGLVGEIIARFEKRGFKIVGLKMIRIGRELAEKHYGEHKGKPFFEPLVGYITSSPVVAMVIEGKNAVGAAREMMGATDPLKAAPGTIRGTYG 106          
BLAST of EY710542 vs. ExPASy Swiss-Prot
Match: NDK_BACHK (Nucleoside diphosphate kinase OS=Bacillus thuringiensis subsp. konkukian GN=ndk PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.972e-22
Identity = 49/106 (46.23%), Postives = 69/106 (65.09%), Query Frame = 3
Query:  303 VEETYIMVKPDGVQRGLVGEIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVGASARKL*GSTDPPQAEPGKIKGDPG 620
            +E+T++MVKPDGVQR  +GEI++RFE            Q   ++A +HY +   KPFF +L+++ITSGPV  M W+G GV  +AR + G T P +A PG I+GD G
Sbjct:    1 MEKTFLMVKPDGVQRAFIGEIVARFEKKGFQLVGAKLMQVTPEIAGQHYAEHTEKPFFGELVDFITSGPVFAMVWQGEGVVDTARNMMGKTRPHEAAPGTIRGDFG 106          
BLAST of EY710542 vs. ExPASy Swiss-Prot
Match: NDK_BACCZ (Nucleoside diphosphate kinase OS=Bacillus cereus (strain ZK / E33L) GN=ndk PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.972e-22
Identity = 49/106 (46.23%), Postives = 69/106 (65.09%), Query Frame = 3
Query:  303 VEETYIMVKPDGVQRGLVGEIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVGASARKL*GSTDPPQAEPGKIKGDPG 620
            +E+T++MVKPDGVQR  +GEI++RFE            Q   ++A +HY +   KPFF +L+++ITSGPV  M W+G GV  +AR + G T P +A PG I+GD G
Sbjct:    1 MEKTFLMVKPDGVQRAFIGEIVARFEKKGFQLVGAKLMQVTPEIAGQHYAEHTEKPFFGELVDFITSGPVFAMVWQGEGVVDTARNMMGKTRPHEAAPGTIRGDFG 106          
BLAST of EY710542 vs. ExPASy Swiss-Prot
Match: NDK_BACCR (Nucleoside diphosphate kinase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=ndk PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.972e-22
Identity = 49/106 (46.23%), Postives = 69/106 (65.09%), Query Frame = 3
Query:  303 VEETYIMVKPDGVQRGLVGEIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVGASARKL*GSTDPPQAEPGKIKGDPG 620
            +E+T++MVKPDGVQR  +GEI++RFE            Q   ++A +HY +   KPFF +L+++ITSGPV  M W+G GV  +AR + G T P +A PG I+GD G
Sbjct:    1 MEKTFLMVKPDGVQRAFIGEIVARFEKKGFQLVGAKLMQVTPEIAGQHYAEHKEKPFFGELVDFITSGPVFAMVWQGEGVVDTARNMMGKTRPHEAAPGTIRGDFG 106          
BLAST of EY710542 vs. ExPASy Swiss-Prot
Match: NDK_BACC1 (Nucleoside diphosphate kinase OS=Bacillus cereus (strain ATCC 10987) GN=ndk PE=3 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 2.972e-22
Identity = 49/106 (46.23%), Postives = 69/106 (65.09%), Query Frame = 3
Query:  303 VEETYIMVKPDGVQRGLVGEIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVGASARKL*GSTDPPQAEPGKIKGDPG 620
            +E+T++MVKPDGVQR  +GEI++RFE            Q   ++A +HY +   KPFF +L+++ITSGPV  M W+G GV  +AR + G T P +A PG I+GD G
Sbjct:    1 MEKTFLMVKPDGVQRAFIGEIVARFEKKGFQLVGAKLMQVTPEIAGQHYAEHTEKPFFGELVDFITSGPVFAMVWQGEGVVDTARNMMGKTRPHEAAPGTIRGDFG 106          
BLAST of EY710542 vs. ExPASy Swiss-Prot
Match: NDK_BACAN (Nucleoside diphosphate kinase OS=Bacillus anthracis GN=ndk PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.972e-22
Identity = 49/106 (46.23%), Postives = 69/106 (65.09%), Query Frame = 3
Query:  303 VEETYIMVKPDGVQRGLVGEIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVGASARKL*GSTDPPQAEPGKIKGDPG 620
            +E+T++MVKPDGVQR  +GEI++RFE            Q   ++A +HY +   KPFF +L+++ITSGPV  M W+G GV  +AR + G T P +A PG I+GD G
Sbjct:    1 MEKTFLMVKPDGVQRAFIGEIVARFEKKGFQLVGAKLMQVTPEIAGQHYAEHTEKPFFGELVDFITSGPVFAMVWQGEGVVDTARNMMGKTRPHEAAPGTIRGDFG 106          
BLAST of EY710542 vs. ExPASy Swiss-Prot
Match: NDK_STAES (Nucleoside diphosphate kinase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=ndk PE=3 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 3.881e-22
Identity = 52/106 (49.06%), Postives = 67/106 (63.21%), Query Frame = 3
Query:  303 VEETYIMVKPDGVQRGLVGEIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVGASARKL*GSTDPPQAEPGKIKGDPG 620
            +E T++M+KPD VQR L+GEIISR E            Q P +LAE+HY +   KPF+ KLI +ITS PV  M  EG    A +RK+ GST+P +A PG I+GD G
Sbjct:    1 MERTFLMIKPDAVQRNLIGEIISRIEKKGLKLVGGKFMQVPMELAEKHYSEHEGKPFYDKLISFITSAPVFAMVVEGENAVAVSRKIIGSTNPSEAAPGTIRGDYG 106          
BLAST of EY710542 vs. ExPASy Swiss-Prot
Match: NDK_STAEQ (Nucleoside diphosphate kinase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=ndk PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.881e-22
Identity = 52/106 (49.06%), Postives = 67/106 (63.21%), Query Frame = 3
Query:  303 VEETYIMVKPDGVQRGLVGEIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVGASARKL*GSTDPPQAEPGKIKGDPG 620
            +E T++M+KPD VQR L+GEIISR E            Q P +LAE+HY +   KPF+ KLI +ITS PV  M  EG    A +RK+ GST+P +A PG I+GD G
Sbjct:    1 MERTFLMIKPDAVQRNLIGEIISRIEKKGLKLVGGKFMQVPMELAEKHYSEHEGKPFYDKLISFITSAPVFAMVVEGENAVAVSRKIIGSTNPSEAAPGTIRGDYG 106          
BLAST of EY710542 vs. ExPASy Swiss-Prot
Match: NDK_PROMS (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain AS9601) GN=ndk PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.881e-22
Identity = 53/103 (51.46%), Postives = 66/103 (64.08%), Query Frame = 3
Query:  306 EETYIMVKPDGVQRGLVGEIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVGASARKL*GSTDPPQAEPGKIKGD 614
            E T+I +KPDGVQRG V EI+ RFE               K+LA+ HY     +PFF  L+++I+SGPVV M WEG GV  SARKL G+T P +AEPG I+GD
Sbjct:    4 ERTFIAIKPDGVQRGYVSEILGRFEKKGFKLVGLKQLIPSKELAQNHYGVHRERPFFGDLVDFISSGPVVAMVWEGEGVILSARKLIGATKPLEAEPGTIRGD 106          
BLAST of EY710542 vs. ExPASy Swiss-Prot
Match: NDK_PROMP (Nucleoside diphosphate kinase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=ndk PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.881e-22
Identity = 53/103 (51.46%), Postives = 66/103 (64.08%), Query Frame = 3
Query:  306 EETYIMVKPDGVQRGLVGEIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVGASARKL*GSTDPPQAEPGKIKGD 614
            E T++ +KPDGVQRG V +II RFE               K LA++HY     +PFF  L+E+I+SGPVV M WEG GV  SARKL G+T P +AEPG I+GD
Sbjct:    4 ERTFLAIKPDGVQRGYVSDIIGRFEKKGFKLVGLKQLIPTKQLAQDHYGVHRERPFFKDLVEFISSGPVVAMIWEGEGVILSARKLIGATKPLEAEPGTIRGD 106          
The following BLAST results are available for this feature:
BLAST of EY710542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 498
Match NameE-valueIdentityDescription
NDK_PELTS2.972e-2250.00Nucleoside diphosphate kinase OS=Pelotomaculum the... [more]
NDK_BACHK2.972e-2246.23Nucleoside diphosphate kinase OS=Bacillus thuringi... [more]
NDK_BACCZ2.972e-2246.23Nucleoside diphosphate kinase OS=Bacillus cereus (... [more]
NDK_BACCR2.972e-2246.23Nucleoside diphosphate kinase OS=Bacillus cereus (... [more]
NDK_BACC12.972e-2246.23Nucleoside diphosphate kinase OS=Bacillus cereus (... [more]
NDK_BACAN2.972e-2246.23Nucleoside diphosphate kinase OS=Bacillus anthraci... [more]
NDK_STAES3.881e-2249.06Nucleoside diphosphate kinase OS=Staphylococcus ep... [more]
NDK_STAEQ3.881e-2249.06Nucleoside diphosphate kinase OS=Staphylococcus ep... [more]
NDK_PROMS3.881e-2251.46Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]
NDK_PROMP3.881e-2251.46Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-024-D06-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710542 ID=EY710542; Name=EY710542; organism=Citrus sinensis; type=EST; length=1024bp
GGACCGCGGTACGCGTCCGGATTCCGGGTCGACCACGCGTCCGGAGAGAG
AGAGAGATGGAGGGTGTAGGTGCGTTAGGTGTGTCATCATCACCAACTCT
TGTTGGCAAGATAAGTTGCAGCAGACGCTTATCCTACAGCTCCAACAAGC
TTACCCTACGCACCACCAGCCACCTTGCAGCATTCCACTCACAGTCCCGT
CTTTTCGTAAAACCCCCATCATGTCGTCGCCGCAGAACCGTTGCTCGCAA
CTCCAACGAAACCGGCATCTTCCTTCCCCACTTGGTCGCTTCCATGGAAC
AAGTTGAGGAGACTTACATTATGGTGAAACCAGATGGTGTTCAACGTGGT
CTGGTTGGCGAAATTATTTCAAGGTTTGAGAAGAAGGGATTCAAACTGAT
TGGCTTGAAGCTCTTTCAATGCCCGAAAGATTTAGCTGAGGAGCACTATA
AGGATCTCAATTCCAAACCATTTTTTCCTAAACTGATTGAGTACATTACT
TCAGGACCAGTTGTATGTATGGCATGGGAGGGTGCTGGTGTGGGAGCATC
TGCACGTAAGTTATAAGGGTCAACAGATCCCCCTCAAGCTGAACCAGGCA
AAATAAAAGGGGATCCTGGCGGTTCAAACTGGGAAGGAAGGGGGGCCATG
GGGAGTGGAAGCCCTGGAAAAGGGCAAGGGGGGAAATAGGGCCCGGGGGG
TCAAAAAAAGGGGGAAGTTGGGGGCCGGGGGAAACCCGCCTCCAAGCCCC
GGGGGTTAAAGGGGAATAAAAAATTCCAACCAAAAACTTTAAAAATAGGG
GGGGGGGGGCAACCTTTTTTGAAAAAAATTTCCCCTTTTCGAGAAAAAAA
AATAAATTTTGGAAAATTTATACAAAAAAAAATTTTTTTTTGGGGTTTGG
GGGGGTGTTTTTTATAAAATATTTTACAAAGGGGGGGGAAAAAAACCCCC
CGCCGAAGGAGGAAAAAAAAGACGCGCCTTTTTTTTTTTTGTGGGGGGGG
GGGAGAAAAAACAAAAAAAAAAAC
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