EY710512

Overview
NameEY710512
Unique NameEY710512
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1060
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710512 vs. ExPASy Swiss-Prot
Match: GL814_ORYSJ (Germin-like protein 8-14 OS=Oryza sativa subsp. japonica GN=GER5 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.147e-16
Identity = 44/95 (46.32%), Postives = 57/95 (60.00%), Query Frame = 2
Query:  230 AEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDV 514
            A DF + GL   GNT+N +    T A V Q PG+N LGISA R+D A  G  P H HP ASE+  V +GT+  GF+TS   +NT+  + L  GD+
Sbjct:   50 AGDFAYHGLAAAGNTSNLIKAAVTPAFVGQFPGVNGLGISAARLDIAVGGVVPLHTHPAASELLFVTQGTVAAGFITSS--SNTVYTRTLYAGDI 142          

HSP 2 Score: 25.409 bits (54), Expect = 4.147e-16
Identity = 14/36 (38.89%), Postives = 20/36 (55.56%), Query Frame = 3
Query:  519 VFPQGLIHFPNSNFGKNKCSCLFWLLKSPFPGVKFT 626
            VFPQGL+H+   N G++    L      P PG++ T
Sbjct:  144 VFPQGLLHY-QYNAGQSAAVALV-AFSGPNPGLQIT 177          
BLAST of EY710512 vs. ExPASy Swiss-Prot
Match: GL24_ORYSJ (Germin-like protein 2-4 OS=Oryza sativa subsp. japonica GN=Os02g0532500 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.852e-15
Identity = 54/132 (40.91%), Postives = 66/132 (50.00%), Query Frame = 2
Query:  131 DPGHLQDVCV---AINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDY-APYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDV 514
            DP  +QD CV       P +   +    C+ P    A DF FSG+   GN +   G         Q PGL+TLG+S  R D  A  G  PPH HPRA+E  LVL G +Y GFV S      L AKVL +G+V
Sbjct:   24 DPDAVQDFCVPDAGRGRPVELAMLPAYPCRSPANLTAGDFAFSGVRAAGNFSPETGFAGVSVTPAQFPGLHTLGMSFARADLSAAGGVNPPHYHPRATETALVLAGRVYAGFVDS---GGRLFAKVLEQGEV 152          
BLAST of EY710512 vs. ExPASy Swiss-Prot
Match: GL31_ORYSJ (Germin-like protein 3-1 OS=Oryza sativa subsp. japonica GN=Os03g0179000 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.380e-15
Identity = 56/134 (41.79%), Postives = 71/134 (52.99%), Query Frame = 2
Query:  131 DPGHLQDVCVAINDPKD--GVF-VNGKFCKDPKLARAEDFFFSGLGKPGNTANRL-GVDET-DANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVF 517
            DP  L D CVA        G F +NG  C DP LARA+ F  S L +  N A  L G + T  +    +PG N  G++  RID AP G  PPH HPRASE  LVL G++ VGF  +   +  L  ++L  G+ F
Sbjct:   23 DPDLLFDYCVADTAAATAAGAFHLNGLACIDPALARADHFATSALSRATNPAATLYGFNATLTSPAASLPGANAQGLAMARIDLAPGGMAPPHSHPRASEAALVLSGSVLVGFADT---SYRLYTQLLRAGEAF 153          

HSP 2 Score: 21.1718 bits (43), Expect = 4.380e-15
Identity = 6/10 (60.00%), Postives = 9/10 (90.00%), Query Frame = 3
Query:  516 FVFPQGLIHF 545
            FVFP+ ++HF
Sbjct:  153 FVFPRAMVHF 162          
BLAST of EY710512 vs. ExPASy Swiss-Prot
Match: GL813_ORYSJ (Germin-like protein 8-13 OS=Oryza sativa subsp. japonica GN=Os08g0459700 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 4.118e-14
Identity = 47/124 (37.90%), Postives = 63/124 (50.81%), Query Frame = 2
Query:  146 QDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVF 517
            QD CVA N P      +G  C+      A DF+   L +PG            A V+Q P +N LGISA R+D  P G  P H HP  SE+  VL+G L  GF++S   +N +  K ++KG +F
Sbjct:   29 QDFCVA-NLPLGADTPSGYQCRPAATVTAADFYSGALARPGILIRPFNTSLASAFVQQYPAVNGLGISASRVDILPGGVVPLHTHPAGSELLYVLDGALVAGFISSS--DNKVYYKEVSKGGMF 149          
The following BLAST results are available for this feature:
BLAST of EY710512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
GL814_ORYSJ4.147e-1646.32Germin-like protein 8-14 OS=Oryza sativa subsp. ja... [more]
GL24_ORYSJ2.852e-1540.91Germin-like protein 2-4 OS=Oryza sativa subsp. jap... [more]
GL31_ORYSJ4.380e-1541.79Germin-like protein 3-1 OS=Oryza sativa subsp. jap... [more]
GL813_ORYSJ4.118e-1437.90Germin-like protein 8-13 OS=Oryza sativa subsp. ja... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-024-A10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710512 ID=EY710512; Name=EY710512; organism=Citrus sinensis; type=EST; length=1060bp
CCGGGGAATTTCCCGGGGTCGAACCCACGACGTCCGGGCACATCCTGGTG
ACTTAATCACCATGAAGGTAATTCAATTTCTTATAGGTTTTGCCCTCTTG
GCTTTGGCTTCTTCTTTGGCCTCTGCCACTGACCCTGGCCATCTTCAAGA
TGTCTGTGTAGCCATCAATGACCCCAAGGATGGTGTGTTTGTGAATGGGA
AGTTCTGCAAGGACCCCAAGCTTGCGAGAGCAGAAGATTTCTTCTTCTCA
GGGCTAGGCAAGCCTGGAAACACAGCAAATCGACTTGGTGTTGATGAAAC
AGATGCAAATGTTGAGCAAATTCCAGGACTCAACACCCTTGGCATATCAG
CATTCCGTATTGACTATGCACCATATGGCCAAAGGCCACCTCACATTCAC
CCCCGTGCCAGCGAAATCTTCTTAGTCCTGGAAGGAACTCTTTATGTCGG
TTTTGTGACATCAGACCAACTGAATAACACACTCATCGCAAAAGTTCTAA
ATAAAGGAGATGTTTTTTGTGTTTCCACAAGGTTTGATTCACTTTCCCAA
TTCAAACTTTGGAAAAAACAAATGCAGCTGCCTATTCTGGCTCCTAAAAA
GCCCATTCCCCGGGGTGAAGTTTACCATAACCGAACCAATCTTTTGGAAC
CCATCCCCTTTCAATTCAATCCCAAATTTTCTTGGCAAGGGGATTCCAGT
TGGGAACCCAAAAAAAAGTTGAAAAATTCTTTAAAAAAAGTTACTTTTAT
GGGCATTTTGGGAAAAGGAATTTATGGAACTTTTAATTTAAATTGGGCCT
TCTTCCCTTAAGGGGCTTGTATAAACTTTATTTTCCCACAAATTTACAAT
ATTTTTTAAAATATAAGGGAAAAAAAAAAAAAGGGTTTCCCTCCAGAAAC
TCCCCCTCCCACACGAGGGAATTTGGGTGGCCCATTAATAAATAAAAAAA
ATAATTTTTTTGTGTTTTGTTTTTTTTTAAAAAAAAAAAAAAAAAAAAAA
AAAAAGGGGGGGGGCGCGCGCCCCCCCCTCGTTCAGAAAGAAAATTTTCT
CGCTCCAGCA
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