EY710499

Overview
NameEY710499
Unique NameEY710499
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length969
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY710499 vs. ExPASy Swiss-Prot
Match: RBS2_THIFE (Ribulose bisphosphate carboxylase small chain 2 OS=Thiobacillus ferrooxidans GN=cbbS2 PE=3 SV=1)

HSP 1 Score: 49.6766 bits (117), Expect = 9.849e-11
Identity = 23/61 (37.70%), Postives = 32/61 (52.46%), Query Frame = 1 
Query:  217 KFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWK 399
            KFETLSYLP L+ + + +++ Y++  GW P +E            H  P    G YW MWK
Sbjct:   18 KFETLSYLPALTADEIRQQVAYIVSKGWNPAVE------------HTEPENAFGNYWYMWK 66

HSP 2 Score: 38.5058 bits (88), Expect = 9.849e-11
Identity = 17/44 (38.64%), Postives = 24/44 (54.55%), Query Frame = 3 
Query:  405 PCMGAQNATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFI 536
            P  G  +   +LKE     K  PH+ VRI+G+DN +Q Q  S +
Sbjct:   68 PMFGETDVDTILKEAERCHKRNPHNHVRIVGYDNFKQSQGTSLV 111
The following BLAST results are available for this feature:
BLAST of EY710499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
RBS2_THIFE9.849e-1137.70Ribulose bisphosphate carboxylase small chain 2 OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-115-H09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710499 ID=EY710499; Name=EY710499; organism=Citrus sinensis; type=EST; length=969bp
CAAGTACCAATGGCTTCCTCAATGATCTCATCGGCCACCGTTGCCACCGC
GAACCGCGCCAGCCTTGCTCAGGCCAGCATGGTCGCCCCCTTCACCGGCC
TCAAGTCTTCTTCTGCTTTCCCAGCAACCAAGAAGACCAACAATGACATT
ACTTCCATTGCAAGCAACGGCGGAAGAGTCCAATGCATGAAGGTGTGGCC
ACCAACTGGCTTGAAGAAGTTCGAGACTCTCTCATACCTCCCGCCACTGT
CCGATGAAGCTTTGCTCAAGGAAATCAATTACCTTATCCGCTCCGGCTGG
ATTCCCTGCTTGGAATTCGAGTTGGAGAAAGGATGGGTGTACCGTGAGCA
CCACAAGTCACCAGGATACTACGATGGACGCTACTGGACAATGTGGAAAG
CTGCCCATGTATGGGTGCACAGAATGCAACCCAGGTTTTGAAGGAGGTTG
GGGAGGTCCAGAAAGAATACCCACATTCATTCGTCCGAATTATCGGATTT
GACAACAAGCGTCAAGTGCAGTGCATCAGTTTCATTGCTGCCCAGCCACC
AGGGGTCAAGGTTCCCCAATTAAATTTGGGAAACCACCCCAGGCAAAATT
GGTGAATTATAATAAGGGGTAACCCCCATAAGGATTCTTCAATAAAAGGG
GGGTTCGGGTTTGAGTTTAATTTGAAATTTAGGCTGGTGGTTGCCGGCTG
CCTCAAATTTTTTTTGGTTTTTCCCCCCCAGACTTTGGGCCTTCTTTTTT
TTTTATTTTAAAAAAAAATATTAAAAAAAAAGAAACCCTTTGGGTTATAT
AAATTTCCATTATAACCGGGGACCCCGAGAAGGTGTTAGAGTTTAAAAGA
GGGGGGAAAAAAATAAAGGGGGAGAAATAAAAAAAAAATAGTTAATTTAA
AGAAGAATTCTGGGGTCGCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAGGGGGGGGACGGCGCC
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