EY710499
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY710499 vs. ExPASy Swiss-Prot
Match: RBS5_FRIAG (Ribulose bisphosphate carboxylase small chain 5, chloroplastic OS=Fritillaria agrestis GN=RBCS5 PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.869e-60 Identity = 92/130 (70.77%), Postives = 109/130 (83.85%), Query Frame = 1 Query: 10 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWK 399 MASS ++VATA A+ AQASMVAPF GLKS+SAFP T+KT ++++ SNGGRVQCMKVWP GLKKFETLSYLP LS E+LLK+I YLIR+GW+PCLEF LE G+V R+++KSPGYYDGRYWTMWK Sbjct: 1 MASSATMLSSVATAACAAPAQASMVAPFVGLKSASAFPVTQKTATGLSTLPSNGGRVQCMKVWPIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLE-GFVSRDNNKSPGYYDGRYWTMWK 129 HSP 2 Score: 65.4698 bits (158), Expect = 1.869e-60 Identity = 28/48 (58.33%), Postives = 35/48 (72.92%), Query Frame = 3 Query: 405 PCMGAQNATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAQP 548 P G A QV+KE E +KEYP +F+R+IGFDN RQVQC+SFI +P Sbjct: 131 PMFGCTGAAQVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSFIVEKP 178 HSP 3 Score: 21.557 bits (44), Expect = 1.869e-60 Identity = 7/8 (87.50%), Postives = 8/8 (100.00%), Query Frame = 2 Query: 398 KLPMYGCT 421 KLPM+GCT Sbjct: 129 KLPMFGCT 136
BLAST of EY710499 vs. ExPASy Swiss-Prot
Match: RBS2_FRIAG (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Fritillaria agrestis GN=RBCS2 PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 3.168e-60 Identity = 91/130 (70.00%), Postives = 108/130 (83.08%), Query Frame = 1 Query: 10 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWK 399 MASS ++VATA + AQASMVAPF GLKS+SAFP T+KT ++++ SNGGRVQCMKVWP GLKKFETLSYLP LS E+LLK+I YLIR+GW+PCLEF LE G+V R+++KSPGYYDGRYWTMWK Sbjct: 1 MASSATMLSSVATAACVAPAQASMVAPFVGLKSASAFPVTQKTVTGLSTLPSNGGRVQCMKVWPIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLE-GFVSRDNNKSPGYYDGRYWTMWK 129 HSP 2 Score: 65.855 bits (159), Expect = 3.168e-60 Identity = 28/48 (58.33%), Postives = 36/48 (75.00%), Query Frame = 3 Query: 405 PCMGAQNATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAQP 548 P G +A QV+KE E +KEYP +F+R+IGFDN RQVQC+SFI +P Sbjct: 131 PMFGCTDAAQVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSFIVEKP 178 HSP 3 Score: 22.3274 bits (46), Expect = 3.168e-60 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 2 Query: 398 KLPMYGCTE 424 KLPM+GCT+ Sbjct: 129 KLPMFGCTD 137
BLAST of EY710499 vs. ExPASy Swiss-Prot
Match: RBS2_LEMGI (Ribulose bisphosphate carboxylase small chain SSU26, chloroplastic OS=Lemna gibba GN=SSU26 PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.170e-60 Identity = 86/130 (66.15%), Postives = 107/130 (82.31%), Query Frame = 1 Query: 10 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWK 399 MASSM++S A RA AQ++MVAPF GL+SS AFPAT+K N +++++ SNGG+V CM+VWPP GLKKFETLSYLPPLS E L KE++YL+R+ W+PC+EF E G+VYRE+H SPGYYDGRYWTMWK Sbjct: 1 MASSMMAST--AAVARAGPAQSNMVAPFNGLRSSVAFPATRKANKNLSTLPSNGGKVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKE-GFVYRENHASPGYYDGRYWTMWK 127 HSP 2 Score: 67.781 bits (164), Expect = 3.170e-60 Identity = 32/48 (66.67%), Postives = 37/48 (77.08%), Query Frame = 3 Query: 405 PCMGAQNATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAQP 548 P G +A+QV+ EV E +K YP FVRIIGFDNKRQVQCISFIA +P Sbjct: 129 PMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 176 HSP 3 Score: 22.7126 bits (47), Expect = 3.170e-60 Identity = 7/11 (63.64%), Postives = 10/11 (90.91%), Query Frame = 2 Query: 398 KLPMYGCTECN 430 KLPM+GCT+ + Sbjct: 127 KLPMFGCTDAS 137
BLAST of EY710499 vs. ExPASy Swiss-Prot
Match: RBS1_FRIAG (Ribulose bisphosphate carboxylase small chain 1/4, chloroplastic OS=Fritillaria agrestis GN=RBCS1 PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 9.099e-60 Identity = 90/130 (69.23%), Postives = 108/130 (83.08%), Query Frame = 1 Query: 10 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWK 399 MA+S ++VATA A+ AQASMVAPF GLKS+SAFP T+K ++++ SNGGRVQCMKVWP GLKKFETLSYLP LS E+LLK+I YLIR+GW+PCLEF LE G+V R+++KSPGYYDGRYWTMWK Sbjct: 1 MAASSTMLSSVATAACAAPAQASMVAPFVGLKSTSAFPVTQKPATGLSTLPSNGGRVQCMKVWPIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLE-GFVSRDNNKSPGYYDGRYWTMWK 129 HSP 2 Score: 65.855 bits (159), Expect = 9.099e-60 Identity = 28/48 (58.33%), Postives = 36/48 (75.00%), Query Frame = 3 Query: 405 PCMGAQNATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAQP 548 P G +A QV+KE E +KEYP +F+R+IGFDN RQVQC+SFI +P Sbjct: 131 PMFGCTDAAQVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSFIVERP 178 HSP 3 Score: 22.3274 bits (46), Expect = 9.099e-60 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 2 Query: 398 KLPMYGCTE 424 KLPM+GCT+ Sbjct: 129 KLPMFGCTD 137
BLAST of EY710499 vs. ExPASy Swiss-Prot
Match: RBS7_FLAPR (Ribulose bisphosphate carboxylase small chain 7, chloroplastic OS=Flaveria pringlei GN=RBCS7 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 1.544e-59 Identity = 82/117 (70.09%), Postives = 102/117 (87.18%), Query Frame = 1 Query: 49 ANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWK 399 A A++AQA+MVAPFTGLKS++AFP TKK N D +++ASNGGRVQCMKVWPP G K++ETLSYLP L++ L KE++YL+R+ W+PCLEFELE G+VYRE+ +SPGYYDGRYWTMWK Sbjct: 6 ATVATVAQANMVAPFTGLKSNAAFPVTKKVN-DFSTLASNGGRVQCMKVWPPLGKKRYETLSYLPNLTEVQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWK 121 HSP 2 Score: 68.5514 bits (166), Expect = 1.544e-59 Identity = 30/50 (60.00%), Postives = 40/50 (80.00%), Query Frame = 3 Query: 405 PCMGAQNATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAQPPG 554 P G ++ QV+KE+ E +KEYP +++RIIGFDN RQVQCISFIA++P G Sbjct: 123 PMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKPDG 172 HSP 3 Score: 22.3274 bits (46), Expect = 1.544e-59 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 2 Query: 398 KLPMYGCTE 424 KLPM+GCT+ Sbjct: 121 KLPMFGCTD 129
BLAST of EY710499 vs. ExPASy Swiss-Prot
Match: RBS3_FLAPR (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Flaveria pringlei GN=RBCS3 PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 3.406e-59 Identity = 81/117 (69.23%), Postives = 101/117 (86.32%), Query Frame = 1 Query: 49 ANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWK 399 A A++AQA+MVAPFTGLKS++AFP TKK N D +++ SNGGRVQCMKVWPP G K++ETLSYLP L++ L KE++YL+R+ W+PCLEFELE G+VYRE+ +SPGYYDGRYWTMWK Sbjct: 6 ATVATVAQANMVAPFTGLKSNAAFPVTKKVN-DFSTLPSNGGRVQCMKVWPPLGKKRYETLSYLPNLTESQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWK 121 HSP 2 Score: 68.5514 bits (166), Expect = 3.406e-59 Identity = 30/50 (60.00%), Postives = 40/50 (80.00%), Query Frame = 3 Query: 405 PCMGAQNATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAQPPG 554 P G ++ QV+KE+ E +KEYP +++RIIGFDN RQVQCISFIA++P G Sbjct: 123 PMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKPDG 172 HSP 3 Score: 22.3274 bits (46), Expect = 3.406e-59 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 2 Query: 398 KLPMYGCTE 424 KLPM+GCT+ Sbjct: 121 KLPMFGCTD 129
BLAST of EY710499 vs. ExPASy Swiss-Prot
Match: RBS1_FLAPR (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Flaveria pringlei GN=RBCS1 PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 5.771e-59 Identity = 81/117 (69.23%), Postives = 101/117 (86.32%), Query Frame = 1 Query: 49 ANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWK 399 A A++AQA+MVAPFTGLK+++AFP TKK N D +++ SNGGRVQCMKVWPP G KK+ETLSYLP L++ L KE++YL+R+ W+PCLEFELE G+VYRE+ +SPGYYDGRYWTMWK Sbjct: 6 ATVATVAQANMVAPFTGLKANAAFPVTKKVN-DFSTLPSNGGRVQCMKVWPPLGKKKYETLSYLPDLTEVQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWK 121 HSP 2 Score: 68.1662 bits (165), Expect = 5.771e-59 Identity = 30/50 (60.00%), Postives = 40/50 (80.00%), Query Frame = 3 Query: 405 PCMGAQNATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAQPPG 554 P G ++ QV+KE+ E +KEYP +++RIIGFDN RQVQCISFIA++P G Sbjct: 123 PMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKPGG 172 HSP 3 Score: 22.3274 bits (46), Expect = 5.771e-59 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 2 Query: 398 KLPMYGCTE 424 KLPM+GCT+ Sbjct: 121 KLPMFGCTD 129
BLAST of EY710499 vs. ExPASy Swiss-Prot
Match: RBS5_FLAPR (Ribulose bisphosphate carboxylase small chain 5, chloroplastic OS=Flaveria pringlei GN=RBCS5 PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 5.771e-59 Identity = 81/117 (69.23%), Postives = 101/117 (86.32%), Query Frame = 1 Query: 49 ANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWK 399 A A++AQA+MVAPFTGLKS++AFP TKK N D +++ SNGGRVQCMKVWPP G K++ETLSYLP L++ L KE++YL+R+ W+PCLEFELE G+VYRE+ +SPGYYDGRYWTMWK Sbjct: 6 ATVATVAQANMVAPFTGLKSNAAFPVTKKVN-DFSTLPSNGGRVQCMKVWPPLGKKRYETLSYLPNLTEVQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWK 121 HSP 2 Score: 68.5514 bits (166), Expect = 5.771e-59 Identity = 30/50 (60.00%), Postives = 40/50 (80.00%), Query Frame = 3 Query: 405 PCMGAQNATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAQPPG 554 P G ++ QV+KE+ E +KEYP +++RIIGFDN RQVQCISFIA++P G Sbjct: 123 PMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKPDG 172 HSP 3 Score: 22.3274 bits (46), Expect = 5.771e-59 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 2 Query: 398 KLPMYGCTE 424 KLPM+GCT+ Sbjct: 121 KLPMFGCTD 129
BLAST of EY710499 vs. ExPASy Swiss-Prot
Match: RBS4_LEMGI (Ribulose bisphosphate carboxylase small chain SSU40B, chloroplastic OS=Lemna gibba GN=SSU40B PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 7.508e-59 Identity = 86/130 (66.15%), Postives = 104/130 (80.00%), Query Frame = 1 Query: 10 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWK 399 MASSM++S A A RA AQ +MV PF +SS FPAT+K NND++++ SNGGRV CM+VWPP GLKKFETLSYLPPLS E L KE++YL+R+ W+PC+EF E G+VYRE+H SPGYYDGRYWTMWK Sbjct: 1 MASSMMASTAAAVA-RAGPAQTNMV-PFNACRSSVPFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKE-GFVYRENHASPGYYDGRYWTMWK 127 HSP 2 Score: 67.781 bits (164), Expect = 7.508e-59 Identity = 32/48 (66.67%), Postives = 37/48 (77.08%), Query Frame = 3 Query: 405 PCMGAQNATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAQP 548 P G +A+QV+ EV E +K YP FVRIIGFDNKRQVQCISFIA +P Sbjct: 129 PMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 176 HSP 3 Score: 22.7126 bits (47), Expect = 7.508e-59 Identity = 7/11 (63.64%), Postives = 10/11 (90.91%), Query Frame = 2 Query: 398 KLPMYGCTECN 430 KLPM+GCT+ + Sbjct: 127 KLPMFGCTDAS 137
BLAST of EY710499 vs. ExPASy Swiss-Prot
Match: RBS3_LEMGI (Ribulose bisphosphate carboxylase small chain SSU40A, chloroplastic OS=Lemna gibba GN=SSU40A PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 2.806e-58 Identity = 85/130 (65.38%), Postives = 104/130 (80.00%), Query Frame = 1 Query: 10 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWK 399 MASSM++S A A RA AQ+SMV PF +SS FPAT+K NN+++++ NGGRV CM+VWPP GLKKFETLSYLPPLS E L KE++YL+R+ W+PC+EF E G+VYRE+H SPGYYDGRYWTMWK Sbjct: 1 MASSMMASTAAAVA-RAGPAQSSMV-PFNACRSSVPFPATRKANNNLSTLPGNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKE-GFVYRENHASPGYYDGRYWTMWK 127 HSP 2 Score: 67.781 bits (164), Expect = 2.806e-58 Identity = 32/48 (66.67%), Postives = 37/48 (77.08%), Query Frame = 3 Query: 405 PCMGAQNATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAQP 548 P G +A+QV+ EV E +K YP FVRIIGFDNKRQVQCISFIA +P Sbjct: 129 PMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 176 HSP 3 Score: 22.7126 bits (47), Expect = 2.806e-58 Identity = 7/11 (63.64%), Postives = 10/11 (90.91%), Query Frame = 2 Query: 398 KLPMYGCTECN 430 KLPM+GCT+ + Sbjct: 127 KLPMFGCTDAS 137 The following BLAST results are available for this feature:
BLAST of EY710499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >EY710499 ID=EY710499; Name=EY710499; organism=Citrus sinensis; type=EST; length=969bpback to top |