EY685218
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY685218 vs. ExPASy Swiss-Prot
Match: HECD1_HUMAN (E3 ubiquitin-protein ligase HECTD1 OS=Homo sapiens GN=HECTD1 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.703e-13 Identity = 52/170 (30.59%), Postives = 87/170 (51.18%), Query Frame = 3 Query: 120 TDYELIPGGRNIKVTEENKHQDVDLVAEHRLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISG--LPDIDLDDMRANTEYS-GYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPGIS 620 T +L P G + +T +N + VDL+ + + T I+ Q+ AF +GF ++ P E +S F+ +E+++++ G P +D+ TE GY+ SP F V+ G S +++ LQF TG S +P G + L + + K + PS +TC + L LP S Sbjct: 2426 TAVDLKPSGEDEMITMDNAEEYVDLMFDFCMHTGIQKQMEAFRDGFNKVFPMEKLSSFSHEEVQMILCGNQSPSWAAEDIINYTEPKLGYTRDSPGFLRFVRVLCGMSSDERKAFLQFTTGCSTLPPGGLANLH----PRLTVVRKVDATDASYPSVNTCVHYLKLPEYS 2591
BLAST of EY685218 vs. ExPASy Swiss-Prot
Match: TRIPC_HUMAN (Probable E3 ubiquitin-protein ligase TRIP12 OS=Homo sapiens GN=TRIP12 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.472e-13 Identity = 51/168 (30.36%), Postives = 79/168 (47.02%), Query Frame = 3 Query: 129 ELIPGGRNIKVTEENKHQDVDLVAEHRLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYS----GYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPGIS 620 EL GG++I VT N + + LV L + Q ++F +GF + P + F +EL+ L+ G D D + E GY+ S +++ +E++ F E + LQFVTG+ ++P+ GF +L + D LPS TC N L LP S Sbjct: 1803 ELKKGGKDIPVTIHNLEEYLRLVIFWALNEGVSRQFDSFRDGFESVFPLSHLQYFYPEELDQLLCG-SKADTWDAKTLMECCRPDHGYTHDSRAVKFLFEILSSFDNEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYS 1969
BLAST of EY685218 vs. ExPASy Swiss-Prot
Match: YDE1_SCHPO (Probable ubiquitin fusion degradation protein C12B10.01c OS=Schizosaccharomyces pombe GN=SPAC12B10.01c PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 1.104e-12 Identity = 50/167 (29.94%), Postives = 80/167 (47.90%), Query Frame = 3 Query: 129 ELIPGGRNIKVTEENKHQDVDLVAEHRLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDD---MRANTEYSGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPGIS 620 ELIP G + VT N ++ V ++ + ++ Q+ AF GF+ + P + + + EL L G D D M++ GY+ SP IQ ++ + +++ LQF+TG+ K+P+ GF+ L + Y D+LPS TC N L LP S Sbjct: 1459 ELIPDGASTPVTTFNVSDYLNYVIDYTVGKGVQQQLEAFQNGFSSVFPYTSLQVLTEHELVTLF-GTVDEDWSYATLMKSIVADHGYTMESPTIQRLLTLMSQMNFQEQRDFLQFITGSRKLPIGGFAGLNPPLTVVRRLNEPPYVPDDYLPSVMTCVNYLKLPEYS 1624
BLAST of EY685218 vs. ExPASy Swiss-Prot
Match: HERC5_HUMAN (Probable E3 ubiquitin-protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.442e-12 Identity = 55/209 (26.32%), Postives = 96/209 (45.93%), Query Frame = 3 Query: 9 LQNLKWMLENDISDVLDLTFSIDADEEKLILYERAQV----TDYELIPGGRNIKVTEENKHQDVDLVAEHRLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYS-GYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPGIS 620 L++LK L D+ L + D + + Y V D LIP G +I V + NK V + +++ F GF ++ ++I +F+ +EL+ +I G D D N Y GY+++ P I FW+ + E+K + L F+TGT ++ ++ + ++ F +++ D + A TCF+ L LP S Sbjct: 803 LEDLK-ELSPDLGKNLQTLLDDEGDNFEEVFYIHFNVHWDRNDTNLIPNGSSITVNQTNKRDYVSKYINYIFNDSVKAVYEEFRRGFYKMCDEDIIKLFHPEELKDVIVGNTDYDWKTFEKNARYEPGYNSSHPTIVMFWKAFHKLTLEEKKKFLVFLTGTDRLQMKDLNNMK-----ITFCCPESWNERDPI-RALTCFSVLFLPKYS 1004
BLAST of EY685218 vs. ExPASy Swiss-Prot
Match: SPKUL_DICDI (Bifunctional serine/threonine-protein kinase/NEDD4-like E3 ubiquitin-protein ligase OS=Dictyostelium discoideum GN=DDB_G0276527 PE=3 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 7.912e-11 Identity = 50/164 (30.49%), Postives = 79/164 (48.17%), Query Frame = 3 Query: 132 LIPGGRNIKVTEENKHQDVDLVAEHRLTTAIRPQINAFLEGFTELIP-GELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFS---ALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLP 611 LI GG +I VT+ NK + + E L + ++ AF GF + ++F+ EL+LL+ G +D ++ N ++ G+ S + F V ++++ L+FVTG +PL GF ++ + SQK LP AHTC QLDLP Sbjct: 1711 LIEGGESIPVTDLNKEEFIQRNIERVLVGCRQSKLEAFKSGFMSIDSLNAHFALFSPTELQLLMCGNTLVDSSVLQKNFKFIGFPDTSSTPKDFRRAVDEMNQDEIRLFLRFVTGMVALPLSGFEKSISIIQVPLSQK------------LPCAHTCSYQLDLP 1862 The following BLAST results are available for this feature:
BLAST of EY685218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >EY685218 ID=EY685218; Name=EY685218; organism=Citrus sinensis; type=EST; length=938bpback to top |