EY685099

Overview
NameEY685099
Unique NameEY685099
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length976
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685099 vs. ExPASy Swiss-Prot
Match: YIHU_ECOLI (Uncharacterized oxidoreductase yihU OS=Escherichia coli (strain K12) GN=yihU PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.901e-11
Identity = 47/176 (26.70%), Postives = 86/176 (48.86%), Query Frame = 2
Query:   59 MLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNN-LTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQ 583
            M+D PV      A  GTL  + GG+ +  + A P+ ++MG   I  GG G G   K+ NN +++A++ L  +EA  L ++L +      K+++ ++A      +  P          S +    F   L  KDL +AL  A ++ V  PL + ++++Y++    G   +D+S + +
Sbjct:  116 MMDVPVGRTSANAITGTLLLLAGGTAEQVERATPILMAMGSELINAGGPGMGIRVKLINNYMSIALNALS-AEAAVLCEALNLPFDVAVKVMSGTAAGKGHFTTSWP------NKVLSGDLSPAFMIDLAHKDLGIALDVANQLHVPMPLGAASREVYSQARAAGRGRQDWSAILE 284          
BLAST of EY685099 vs. ExPASy Swiss-Prot
Match: Y770_MYCTU (Uncharacterized oxidoreductase Rv0770/MT0794 OS=Mycobacterium tuberculosis GN=Rv0770 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.462e-11
Identity = 50/155 (32.26%), Postives = 70/155 (45.16%), Query Frame = 2
Query:   59 MLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDS--YNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQA 517
            ++DAPVSGG  AA  G L  MVG  ++A+Q  K  F       I+ G  G G   K+  N+   VS    +EA  L ++ G+    L K++  S +    + +  +      ME     R         L  KDL+LALA  + V VD PL   A
Sbjct:  121 IVDAPVSGGAAAAAKGELAVMVGADDEAFQRIKEPFSRWASLLIHAGEPGAGTRMKLARNMLTFVSYAAAAEAQRLAEACGLDLVALGKVVRHSDSFTGGAGAIMFRNTTAPMEPADPLRPL-LEHTRGLGEKDLSLALALGEVVSVDLPLAQLA 274          
The following BLAST results are available for this feature:
BLAST of EY685099 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
YIHU_ECOLI2.901e-1126.70Uncharacterized oxidoreductase yihU OS=Escherichia... [more]
Y770_MYCTU6.462e-1132.26Uncharacterized oxidoreductase Rv0770/MT0794 OS=My... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-G04-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685099 ID=EY685099; Name=EY685099; organism=Citrus sinensis; type=EST; length=976bp
CCACGCGTCCGCTAATTGTATTCTAAAAGAAAAGAAAGATTCATGGGAAA
ACCCTGTCATGTTGGATGCTCCCGTCTCTGGGGGTGTTCTTGCTGCAGAG
GCTGGTACACTAACTTTCATGGTTGGTGGCTCTGAGGATGCATATCAGGC
TGCAAAACCCTTGTTCCTCTCAATGGGGAAAAACACAATATACTGTGGTG
GAGCAGGAAATGGGGCGGCAGCAAAAATTTGCAATAACTTGACAATGGCT
GTGAGCATGCTTGGGGTGTCAGAAGCCCTGACACTTGGTCAGTCGCTAGG
AATATCTGCTAGTACTCTAACAAAGATATTGAACTCTTCAAGTGCTCGCT
GTTGGAGTAGTGACAGTTATAATCCTGTTCCTGGGGTGATGGAAGGGGTG
CCGGCTTCAAGGAATTATGGTGGTGGGTTTGCATCTAAGCTCATGGCCAA
AGACTTGAACCTTGCTTTGGCATCAGCAAAAGAGGTTGGCGTCGATTGCC
CGTTAACATCACAAGCACAAGACATATACGCGAAGCTCTGTGAGAATGGA
CATGATTCCAAGGACTTCTCCTGCGTTTTCCAGCATTATTATGGAGGCAA
GGATGAAATTTAGCTTCAACATTCAAGGACCCTGCTTTTAACAATCCCTT
CTGATTCCTCTTGAAAAACAAAGCGCATTTCATCAAAAATAACCTCCCCT
AAGGGTTCGTCCCTTTTCCCAAAAAAAATTGCCGCTAATAAAATCTTTTT
CAATTAAAAAAAAAAAAAAAGGGGGCCCCTCCCAAAGGATCCAAGTCTAC
GAAACCCAGGCAGCAACATACTAATCCTTCAATAGGGGCCCTTAAATTCC
ATTCCCTGGCCCGCCTTTAAACAGGGGAAGGCAGGGAAAAACCCTGGCAT
TACCCCACATAAAAGCTTTTGCCACCAACCCCCCTTTTCCACGATTGGGA
AAAAAAAAAAAAGGACCCACACAAAC
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