EY685084

Overview
NameEY685084
Unique NameEY685084
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685084 vs. ExPASy Swiss-Prot
Match: SC61A_HALRO (Protein transport protein Sec61 subunit alpha OS=Halocynthia roretzi PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.035e-63
Identity = 114/181 (62.98%), Postives = 138/181 (76.24%), Query Frame = 1
Query:   22 LPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPT 558
            LPN+ NL AT+LVF IV+YFQGF+V LP++S   RGQ  +YPIKLFYTSN+PIILQSALVS LY ISQ+L  ++ GNFF+ LLG W++ E  G   S PV  L YY++ P S   M  +P H L Y+ FML +CA FSKTWIEVSGS+A+DVAKQLKEQQMVM GHR+ ++  ELNRYIPT
Sbjct:  239 LPNLMNLSATILVFGIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSGLYVISQMLAIRFRGNFFIGLLGVWEDVEGGGPARSYPV-ALCYYLSPPESFFSMFLDPIHGLLYITFMLGSCAFFSKTWIEVSGSAAKDVAKQLKEQQMVMRGHREKSMIHELNRYIPT 418          

HSP 2 Score: 39.2762 bits (90), Expect = 2.035e-63
Identity = 21/34 (61.76%), Postives = 24/34 (70.59%), Query Frame = 3
Query:  594 LTILADFLGPIGS*PGILAAGTIIYTDFEPLKKE 695
            L++LADF+G IGS  GIL A TIIY  FE   KE
Sbjct:  430 LSVLADFIGAIGSGTGILLAVTIIYQYFEIFVKE 463          
BLAST of EY685084 vs. ExPASy Swiss-Prot
Match: S61A2_PONAB (Protein transport protein Sec61 subunit alpha isoform 2 OS=Pongo abelii GN=SEC61A2 PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 5.409e-63
Identity = 117/181 (64.64%), Postives = 144/181 (79.56%), Query Frame = 1
Query:   22 LPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPT 558
            LPN+ NL+ATV VF +V+YFQGF+V LP++S   RGQ  +YPIKLFYTSN+PIILQSALVSNLY ISQ+L  ++SGNF VNLLG+W +    G   S PVGGL YY++ P S+  +  +P H + Y++FML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GHRD+++  ELNRYIPT
Sbjct:  239 LPNLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLSVRFSGNFLVNLLGQWADVSGGGPARSYPVGGLCYYLSPPESMGAILEDPVHVVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRDTSMVHELNRYIPT 419          
BLAST of EY685084 vs. ExPASy Swiss-Prot
Match: S61A2_MOUSE (Protein transport protein Sec61 subunit alpha isoform 2 OS=Mus musculus GN=Sec61a2 PE=2 SV=3)

HSP 1 Score: 241.121 bits (614), Expect = 7.064e-63
Identity = 117/181 (64.64%), Postives = 144/181 (79.56%), Query Frame = 1
Query:   22 LPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPT 558
            LPN+ NL+ATV VF +V+YFQGF+V LP++S   RGQ  +YPIKLFYTSN+PIILQSALVSNLY ISQ+L  ++SGNF VNLLG+W +    G   S PVGGL YY++ P S+  +  +P H + Y++FML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GHRD+++  ELNRYIPT
Sbjct:  239 LPNLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLSVRFSGNFLVNLLGQWADVSGGGPARSYPVGGLCYYLSPPESMGAIFEDPVHVVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRDTSMVHELNRYIPT 419          
BLAST of EY685084 vs. ExPASy Swiss-Prot
Match: S61A2_HUMAN (Protein transport protein Sec61 subunit alpha isoform 2 OS=Homo sapiens GN=SEC61A2 PE=2 SV=3)

HSP 1 Score: 241.121 bits (614), Expect = 7.064e-63
Identity = 117/181 (64.64%), Postives = 144/181 (79.56%), Query Frame = 1
Query:   22 LPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPT 558
            LPN+ NL+ATV VF +V+YFQGF+V LP++S   RGQ  +YPIKLFYTSN+PIILQSALVSNLY ISQ+L  ++SGNF VNLLG+W +    G   S PVGGL YY++ P S+  +  +P H + Y++FML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GHRD+++  ELNRYIPT
Sbjct:  239 LPNLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLSVRFSGNFLVNLLGQWADVSGGGPARSYPVGGLCYYLSPPESMGAIFEDPVHVVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRDTSMVHELNRYIPT 419          
BLAST of EY685084 vs. ExPASy Swiss-Prot
Match: S61A2_BOVIN (Protein transport protein Sec61 subunit alpha isoform 2 OS=Bos taurus GN=SEC61A2 PE=2 SV=3)

HSP 1 Score: 241.121 bits (614), Expect = 7.064e-63
Identity = 117/181 (64.64%), Postives = 144/181 (79.56%), Query Frame = 1
Query:   22 LPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPT 558
            LPN+ NL+ATV VF +V+YFQGF+V LP++S   RGQ  +YPIKLFYTSN+PIILQSALVSNLY ISQ+L  ++SGNF VNLLG+W +    G   S PVGGL YY++ P S+  +  +P H + Y++FML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GHRD+++  ELNRYIPT
Sbjct:  239 LPNLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLSVRFSGNFLVNLLGQWADVSGGGPARSYPVGGLCYYLSPPESMGAIFEDPVHVVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRDTSMVHELNRYIPT 419          
BLAST of EY685084 vs. ExPASy Swiss-Prot
Match: SC61A_NEUCR (Protein transport protein SEC61 subunit alpha OS=Neurospora crassa GN=sec-61 PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 1.494e-59
Identity = 105/188 (55.85%), Postives = 135/188 (71.81%), Query Frame = 1
Query:   22 LPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPT-----GCCL 570
            LPNI NLLAT++VF  V+Y QGF+V +PV+S   RG +G+YPI+LFYTSNMPI+LQSAL SN++ ISQ+LY ++S N  V L G W+  E +     V GL YY++ P +  D   +P H   Y+ +MLTACA+FSKTWIEVSGSS RDVAKQLK+Q +VM GHR+ ++ KEL R IPT     G C+
Sbjct:  241 LPNIMNLLATLVVFAAVIYLQGFRVEIPVKSSRQRGARGSYPIRLFYTSNMPIMLQSALSSNVFLISQMLYSRFSENLLVRLFGVWEAKEGTAQLSAVSGLVYYMSPPLNFKDALLDPIHTAVYIAYMLTACAVFSKTWIEVSGSSPRDVAKQLKDQGLVMAGHREQSMYKELKRIIPTAAAFGGACI 428          

HSP 2 Score: 30.8018 bits (68), Expect = 1.494e-59
Identity = 16/34 (47.06%), Postives = 21/34 (61.76%), Query Frame = 3
Query:  594 LTILADFLGPIGS*PGILAAGTIIYTDFEPLKKE 695
            L++ +D +G +GS  G L A TIIY  FE   KE
Sbjct:  431 LSVASDLMGALGSGTGTLLAVTIIYGYFEIAAKE 464          

HSP 3 Score: 24.6386 bits (52), Expect = 1.494e-59
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 2
Query:  560 AAAFGGMCIGA 592
            AAAFGG CIGA
Sbjct:  420 AAAFGGACIGA 430          
BLAST of EY685084 vs. ExPASy Swiss-Prot
Match: SC61A_SCHPO (Protein transport protein sec61 subunit alpha OS=Schizosaccharomyces pombe GN=sec61 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.632e-51
Identity = 99/189 (52.38%), Postives = 130/189 (68.78%), Query Frame = 1
Query:    4 TRGSAPLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPTGCCL 570
            T     LPN+ N  AT+LVF +V+Y Q F+V +P+RS+  RG +  +P+KL YTSN PI+LQSAL SNL+F S+LL+ ++S NF V  LG W+++  S       GL+YY++ PAS  D   +P H L Y+ F + ACALFSK WIEVSG+S RDVAKQLK QQ+VM GHR+ ++ KEL R IPT   L
Sbjct:  242 TSSQIQLPNLWNFFATLLVFGVVIYLQDFRVEIPIRSQKFRGYRSTFPVKLLYTSNTPIMLQSALTSNLFFASRLLFNRFSSNFLVRFLGVWEQTATS-------GLSYYLSPPASFQDALIDPIHTLVYVFFTMFACALFSKLWIEVSGASPRDVAKQLKSQQLVMAGHREGSMYKELKRIIPTAAWL 423          
BLAST of EY685084 vs. ExPASy Swiss-Prot
Match: SC61A_HANAN (Protein transport protein SEC61 subunit alpha OS=Hansenula anomala GN=SEC61 PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.603e-51
Identity = 95/179 (53.07%), Postives = 123/179 (68.72%), Query Frame = 1
Query:   22 LPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPT 558
            LPNI  LLAT +VF +VVY QGF+  +PVRS   RGQ G YPIKLFYTSN PI+LQSAL SN + ISQ+L++++  N  V L G W     S       GLAYY+  P SL +   +P   + Y+ F+L+ CALFSKTWIE+SG++ RDVAKQ K+Q +V+ G R++++ KEL R IPT
Sbjct:  241 LPNIFQLLATFIVFFLVVYLQGFRYEIPVRSTRQRGQNGLYPIKLFYTSNTPIMLQSALTSNFFIISQMLFQRFPLNPVVRLFGVWDARPGSAQLFASNGLAYYIQPPLSLTEALLDPIKTVIYVSFVLSVCALFSKTWIEISGTAPRDVAKQFKDQGLVIAGRRETSVYKELKRIIPT 419          

HSP 2 Score: 28.8758 bits (63), Expect = 5.603e-51
Identity = 15/34 (44.12%), Postives = 20/34 (58.82%), Query Frame = 3
Query:  594 LTILADFLGPIGS*PGILAAGTIIYTDFEPLKKE 695
            L++  D LG +GS   IL A T IY+ +E   KE
Sbjct:  431 LSVACDLLGTLGSGTSILLAVTTIYSYYEIAAKE 464          
BLAST of EY685084 vs. ExPASy Swiss-Prot
Match: SC61A_DEBHA (Protein transport protein SEC61 subunit alpha OS=Debaryomyces hansenii GN=SEC61 PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 8.101e-51
Identity = 92/179 (51.40%), Postives = 128/179 (71.51%), Query Frame = 1
Query:   22 LPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPT 558
            LPN+  L+ATV VFL+VVY QGF++ LP++S   RG  G YPI+LFYTSN+PI+LQSAL SN++ ISQ+L+ ++  N FV +LG W   + +     V GLAYY+  P S  +   +P   + Y++F+L +CA+FS TWIE+SG+S RDVAKQ KEQ +V+ GHRD++  +EL + IPT
Sbjct:  241 LPNMFQLIATVFVFLLVVYLQGFRIELPIKSTRQRGPYGLYPIRLFYTSNIPIMLQSALSSNIFIISQMLFVRWPNNIFVKILGSWDTRQGAAQLYAVSGLAYYIQPPLSFTEALLDPIKTIIYIIFVLGSCAVFSTTWIEISGASPRDVAKQFKEQGLVIAGHRDTSAYRELKKIIPT 419          
BLAST of EY685084 vs. ExPASy Swiss-Prot
Match: SC61A_CANAL (Protein transport protein SEC61 subunit alpha OS=Candida albicans GN=SEC61 PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 5.806e-49
Identity = 93/177 (52.54%), Postives = 123/177 (69.49%), Query Frame = 1
Query:   22 LPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYI 552
            LPN+  LLAT+LVF  VVY QGF++ LP++S   RG  G+YPI+LFYTSN+PI+L+SAL SN++ ISQLL+ ++  N FV LLG W     S      GGLAYY+  P +  D   +P     Y+ F+L +CA+FS TWIE+SG+S RDVAKQ KEQ +V+ GHRD++  KEL + I
Sbjct:  241 LPNMFQLLATLLVFFAVVYLQGFRIELPMKSTRQRGPYGSYPIRLFYTSNIPIMLESALASNIFIISQLLFMRWPNNLFVKLLGTWDARAGSSQLYANGGLAYYIQPPFNFTDALLDPIKTTIYIAFVLGSCAVFSTTWIEISGTSPRDVAKQFKEQGLVIAGHRDTSAYKELKKII 417          
The following BLAST results are available for this feature:
BLAST of EY685084 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
SC61A_HALRO2.035e-6362.98Protein transport protein Sec61 subunit alpha OS=H... [more]
S61A2_PONAB5.409e-6364.64Protein transport protein Sec61 subunit alpha isof... [more]
S61A2_MOUSE7.064e-6364.64Protein transport protein Sec61 subunit alpha isof... [more]
S61A2_HUMAN7.064e-6364.64Protein transport protein Sec61 subunit alpha isof... [more]
S61A2_BOVIN7.064e-6364.64Protein transport protein Sec61 subunit alpha isof... [more]
SC61A_NEUCR1.494e-5955.85Protein transport protein SEC61 subunit alpha OS=N... [more]
SC61A_SCHPO1.632e-5152.38Protein transport protein sec61 subunit alpha OS=S... [more]
SC61A_HANAN5.603e-5153.07Protein transport protein SEC61 subunit alpha OS=H... [more]
SC61A_DEBHA8.101e-5151.40Protein transport protein SEC61 subunit alpha OS=D... [more]
SC61A_CANAL5.806e-4952.54Protein transport protein SEC61 subunit alpha OS=C... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-E09-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685084 ID=EY685084; Name=EY685084; organism=Citrus sinensis; type=EST; length=957bp
CGGACGCGTGGGTCGGCACCCCTTCCCAATATTACTAATTTGCTTGCTAC
AGTCCTCGTATTCCTTATTGTTGTCTACTTTCAAGGTTTCAAAGTGGTGT
TGCCCGTGAGATCAAAAAATGCCCGTGGGCAACAGGGTGCTTATCCAATT
AAGCTATTCTACACATCCAACATGCCTATCATTCTCCAATCTGCACTTGT
CTCAAATCTGTATTTCATCTCTCAGTTGCTCTACAGGAAGTACAGTGGCA
ATTTCTTTGTTAATCTGTTAGGGAAGTGGAAGGAATCTGAATATTCTGGC
CACTCTATTCCAGTTGGTGGCCTAGCTTATTATGTCACTGCACCAGCAAG
CTTGGCTGATATGGCAGCCAATCCTTTCCATGCTCTGTTCTACCTGGTTT
TTATGCTTACTGCTTGTGCTCTTTTCTCGAAAACTTGGATTGAAGTTTCA
GGGTCTTCTGCCCGGGATGTGGCCAAGCAGCTTAAGGAGCAACAAATGGT
GATGCCTGGACATAGAGACTCAAATCTTCAAAAGGAACTGAACCGGTACA
TACCAACTGGCTGCTGCCTTTGGCGGAATGTGCATTGGTGCATCTAACCA
TCCTGGCTGATTTCCTGGGACCAATTGGGTCATGACCTGGGATATTGGCC
GCCGGTACTATCATATATACAGATTTTGAACCTTTGAAAAAAGAAACAAC
TAAGAAACTTGCTTTCTTTGGTATTTAATACACCAAGATCTTAATTTTGA
AAAAGCGCCAAATGAAATCGCCAACATTATCCCACCAAATAGCAAGAATC
CATAAAGCCCCCGCTCTTACGCCCTACGACAAACCCCTCCCCCTACTCTA
GGCCTAACCAGGCGTTCCGCCGCCTTCCTTCCCTATACCAACATCATCCC
CCCTCTCCACCACTCCCGCGCCCCCAAGCAACGCAACTCACCCTCATAAC
CACTACC
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