EY685084

Overview
NameEY685084
Unique NameEY685084
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685084 vs. ExPASy Swiss-Prot
Match: SECY_METJA (Preprotein translocase subunit secY OS=Methanocaldococcus jannaschii GN=secY PE=1 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 3.790e-24
Identity = 59/185 (31.89%), Postives = 101/185 (54.59%), Query Frame = 1
Query:    7 RGSAPLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSN--LQKELNRYIP 555
            +G   +  I  ++ T++VFL+VVY +  +V +P+     +G  G YPIK  Y SN+P+IL +AL +N+      LYR       + +LG ++          V G+AYY++ P  L+ + ++P HA+ Y++ M+  C +F   W+E +G   + +AK++    M + G R S   ++  L RYIP
Sbjct:  202 QGVPNIEYIAPIIGTIIVFLMVVYAECMRVEIPLAHGRIKGAVGKYPIKFVYVSNIPVILAAALFANIQLWGLALYR-----MGIPILGHYEGGR------AVDGIAYYLSTPYGLSSVISDPIHAIVYMIAMIITCVMFGIFWVETTGLDPKSMAKRIGSLGMAIKGFRKSEKAIEHRLKRYIP 375          
BLAST of EY685084 vs. ExPASy Swiss-Prot
Match: SSH1_YEAST (Sec sixty-one protein homolog OS=Saccharomyces cerevisiae GN=SSH1 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.490e-20
Identity = 55/182 (30.22%), Postives = 94/182 (51.65%), Query Frame = 1
Query:   22 LPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFIS----QLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIP 555
            LPN+T  +  + + +IV Y Q  +V LP+RS  ARG    YPIKL YT  + ++    ++  ++  +    QL+ +    +    ++G + E+  +  ++P   L+      +    +   P   + Y  F+L     F+  W  +SGSSARDVA + K+Q + + G R+ N+ KELN+ IP
Sbjct:  244 LPNLTTTIIVLAIAIIVCYLQSVRVELPIRSTRARGTNNVYPIKLLYTGCLSVLFSYTILFYIHIFAFVLIQLVAKNEPTHIICKIMGHY-ENANNLLAVPTFPLSLLAPPTSFFKGVTQQPLTFITYSAFILVTGIWFADKWQAISGSSARDVALEFKDQGITLMGRREQNVAKELNKVIP 424          
BLAST of EY685084 vs. ExPASy Swiss-Prot
Match: YGMH_SCHPO (Uncharacterized protein C19G7.17 OS=Schizosaccharomyces pombe GN=SPBC19G7.17 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.946e-20
Identity = 51/178 (28.65%), Postives = 93/178 (52.25%), Query Frame = 1
Query:   28 NITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESE-YSGHSIP-VGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIP 555
            +    L  + VF   +Y    ++ +P+RS   RG +  +P+KL YTS +P+I   +++S+L   +  LY     +    LL ++   + ++ H +  VGGL Y++  P  L++   +P H + Y + ++     FS  W+  +    RDV    KE Q+V+ G+R++ + KEL + IP
Sbjct:  245 SFVQFLVCIAVFATFMYTLNIRIDVPIRSSRVRGVRQNFPLKLLYTSVIPLIYFYSILSHLLVFAYALYSLCPNSLITRLLVQYSPIDTFAEHKLQLVGGLVYFLYPPLGLSEALLHPVHTVIYTITLICITIYFSLLWMNATAGGPRDVLLFFKENQLVIAGYREATMLKELEKIIP 422          
BLAST of EY685084 vs. ExPASy Swiss-Prot
Match: SECY_HALVO (Preprotein translocase subunit secY OS=Halobacterium volcanii GN=secY PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.300e-18
Identity = 57/185 (30.81%), Postives = 96/185 (51.89%), Query Frame = 1
Query:   40 LLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLAD-------MAANP----FHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSN--LQKELNRYIP 555
            L+ T+L+F IVVY +  +V +P+     +G +G +P+KL Y S +P+IL  AL +N+ F+ + L   + G      +  W     SG     GGL YY+    S +D        +A+P       L  L+FM+   A+F+  W+E +G   +  A+Q++   M +PG R +   +++ + RYIP
Sbjct:  249 LITTLLIFGIVVYAESVRVEIPLSHARVKGARGRFPVKLIYASVLPMILVRALQANIQFLGRFLNSSWVG------MPAWLGQYTSGQ--VTGGLLYYLAPIQSRSDWMWFLGLTSADPLDIAIRVLIDLIFMIVGGAVFAIFWVETTGMGPKSTAQQIQNSGMQIPGFRRNPQVIERVMERYIP 425          
BLAST of EY685084 vs. ExPASy Swiss-Prot
Match: SECY_ARCFU (Preprotein translocase subunit secY OS=Archaeoglobus fulgidus GN=secY PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.227e-16
Identity = 60/194 (30.93%), Postives = 98/194 (50.52%), Query Frame = 1
Query:   31 ITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLAD------------MAANP-----FHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSN--LQKELNRYIP 555
            I  L+ T  + L+VV+F+G +V +P+    ARG +G +PIKL Y S +P+I   AL +N+  + Q+L+ +      V + G++   +       V GL +++   +S  D             AA P      H L   + ++    +F+  W+E SG  AR VA Q+ +  M +PG R S   L++ L+RYIP
Sbjct:  246 ILALITTAAIILLVVFFEGTRVEIPLAHAVARGARGRFPIKLIYASVLPMIFVRALQANVVALGQVLHAR-----GVTIFGEFVNGK------AVSGLMFFLQPVSSPYDWIPSLVKSQGAAFAAIPDWMIYLHLLIDALILVVGGIIFAWFWVETSGMDARTVASQIAKSGMQVPGFRKSPQVLERVLSRYIP 428          
BLAST of EY685084 vs. ExPASy Swiss-Prot
Match: SECY_HALMA (Preprotein translocase subunit secY OS=Haloarcula marismortui GN=secY PE=3 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 4.961e-16
Identity = 56/188 (29.79%), Postives = 90/188 (47.87%), Query Frame = 1
Query:   31 ITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADM------AANPFHALFY-----LVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDS--NLQKELNRYIP 555
            +  L  TVL+F +VVY +  +V +P+ +   +G +G +P+KL Y S +P+IL  AL +N+ F+ ++L  +         LG +   +      P GGL Y++    S  D        A P   +       L  ML   A+F+  W+E +       AKQ+    M +PG R +   ++K L RYIP
Sbjct:  246 LLGLFTTVLIFAVVVYAESVRVEIPLSNARVKGARGRFPVKLIYASVLPMILVRALQANIQFLGRILNAQLGS--MPAFLGTYANGQ------PTGGLFYFLAPIQSRGDWMWWLEGTAQPVWQILTRVGIDLFVMLVGGAVFAVFWVETTDMGPEATAKQIHNSGMQIPGFRQNVGVIEKVLERYIP 425          
BLAST of EY685084 vs. ExPASy Swiss-Prot
Match: SECY_HALSA (Preprotein translocase subunit secY OS=Halobacterium salinarium GN=secY PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.105e-15
Identity = 55/188 (29.26%), Postives = 93/188 (49.47%), Query Frame = 1
Query:   31 ITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPAS-------LADMAANPFHALFY----LVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSN--LQKELNRYIP 555
            I  LL T+ ++++VVY +  +V +P+     +G +G +P+KL Y S +P+IL  AL +N+ F+ Q+L      N  +  +  W    Y G+    GGL YY+    S        +   A  +  L      L FM+   A+F+  W+E +       A+Q++   M +PG R +   ++K + RYIP
Sbjct:  246 ILGLLTTLFIYVVVVYAESVRVEIPLSHARVKGARGRFPVKLIYASVLPMILVRALQANIQFLGQIL------NSTLASMPTWL-GVYGGNGQVTGGLFYYLAPIYSPNAWMWWTSGATAARWQVLIRIAIDLSFMIIGGAIFAIFWVETADMGPDATARQIQNSGMQIPGFRKNQGVIEKVMERYIP 426          
BLAST of EY685084 vs. ExPASy Swiss-Prot
Match: SECY_AERPE (Preprotein translocase subunit secY OS=Aeropyrum pernix GN=secY PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.596e-14
Identity = 46/178 (25.84%), Postives = 89/178 (50.00%), Query Frame = 1
Query:   25 PNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSN--LQKELNRYI 552
            P++T    T+   +++VY Q  +V +P+ S+  +G +   P++  Y +N+PI+L   LVS+L  + +LL          + LG  +   Y  +S     + YY++ P  +    A+P     ++        +F   W+E++G + R+ A++L +  + +PG R     L++ L RYI
Sbjct:  229 PDLTGFFTTLAAIILLVYLQAMRVEIPITSERFKGIRSRVPLQFIYVTNIPILLVGILVSDLLLVQRLL---------ADYLGV-ESRAYQIYS----SIVYYLSPPRGVVQSIADPVKTAVFIASWTVLSIVFGYMWVEIAGLNPREQAERLIKGGLAIPGMRSDPRVLERVLRRYI 392          
The following BLAST results are available for this feature:
BLAST of EY685084 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
SECY_METJA3.790e-2431.89Preprotein translocase subunit secY OS=Methanocald... [more]
SSH1_YEAST1.490e-2030.22Sec sixty-one protein homolog OS=Saccharomyces cer... [more]
YGMH_SCHPO1.946e-2028.65Uncharacterized protein C19G7.17 OS=Schizosaccharo... [more]
SECY_HALVO5.300e-1830.81Preprotein translocase subunit secY OS=Halobacteri... [more]
SECY_ARCFU2.227e-1630.93Preprotein translocase subunit secY OS=Archaeoglob... [more]
SECY_HALMA4.961e-1629.79Preprotein translocase subunit secY OS=Haloarcula ... [more]
SECY_HALSA1.105e-1529.26Preprotein translocase subunit secY OS=Halobacteri... [more]
SECY_AERPE1.596e-1425.84Preprotein translocase subunit secY OS=Aeropyrum p... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-E09-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685084 ID=EY685084; Name=EY685084; organism=Citrus sinensis; type=EST; length=957bp
CGGACGCGTGGGTCGGCACCCCTTCCCAATATTACTAATTTGCTTGCTAC
AGTCCTCGTATTCCTTATTGTTGTCTACTTTCAAGGTTTCAAAGTGGTGT
TGCCCGTGAGATCAAAAAATGCCCGTGGGCAACAGGGTGCTTATCCAATT
AAGCTATTCTACACATCCAACATGCCTATCATTCTCCAATCTGCACTTGT
CTCAAATCTGTATTTCATCTCTCAGTTGCTCTACAGGAAGTACAGTGGCA
ATTTCTTTGTTAATCTGTTAGGGAAGTGGAAGGAATCTGAATATTCTGGC
CACTCTATTCCAGTTGGTGGCCTAGCTTATTATGTCACTGCACCAGCAAG
CTTGGCTGATATGGCAGCCAATCCTTTCCATGCTCTGTTCTACCTGGTTT
TTATGCTTACTGCTTGTGCTCTTTTCTCGAAAACTTGGATTGAAGTTTCA
GGGTCTTCTGCCCGGGATGTGGCCAAGCAGCTTAAGGAGCAACAAATGGT
GATGCCTGGACATAGAGACTCAAATCTTCAAAAGGAACTGAACCGGTACA
TACCAACTGGCTGCTGCCTTTGGCGGAATGTGCATTGGTGCATCTAACCA
TCCTGGCTGATTTCCTGGGACCAATTGGGTCATGACCTGGGATATTGGCC
GCCGGTACTATCATATATACAGATTTTGAACCTTTGAAAAAAGAAACAAC
TAAGAAACTTGCTTTCTTTGGTATTTAATACACCAAGATCTTAATTTTGA
AAAAGCGCCAAATGAAATCGCCAACATTATCCCACCAAATAGCAAGAATC
CATAAAGCCCCCGCTCTTACGCCCTACGACAAACCCCTCCCCCTACTCTA
GGCCTAACCAGGCGTTCCGCCGCCTTCCTTCCCTATACCAACATCATCCC
CCCTCTCCACCACTCCCGCGCCCCCAAGCAACGCAACTCACCCTCATAAC
CACTACC
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