EY685079

Overview
NameEY685079
Unique NameEY685079
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length994
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685079 vs. ExPASy Swiss-Prot
Match: TCTP_WHEAT (Translationally-controlled tumor protein homolog OS=Triticum aestivum GN=TCTP PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 3.147e-40
Identity = 72/102 (70.59%), Postives = 81/102 (79.41%), Query Frame = 2
Query:   74 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMNRFIKLLTPKL 379
            MLVYQD L+GDELLSDSFPY+E ENG+LWEV+G WVVQGAVDVDIGANPS               KVVDIVDTFRLQEQPAFDKKQF+++M R+IK L+ KL
Sbjct:    1 MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGDDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFISHMKRYIKNLSAKL 102          

HSP 2 Score: 40.0466 bits (92), Expect = 3.147e-40
Identity = 21/35 (60.00%), Postives = 26/35 (74.29%), Query Frame = 1
Query:  433 FLLSKLRDLQSFVAETIHDDGCLAFAVLPGKVGAA 537
            +LLSKL+DLQ FV E++HDDG + FA    K GAA
Sbjct:  120 YLLSKLKDLQFFVGESMHDDGGVVFAYY--KEGAA 152          
BLAST of EY685079 vs. ExPASy Swiss-Prot
Match: TCTP_ARATH (Translationally-controlled tumor protein homolog OS=Arabidopsis thaliana GN=TCTP PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 5.947e-40
Identity = 75/103 (72.82%), Postives = 81/103 (78.64%), Query Frame = 2
Query:   74 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMNRFIKLLTPKLS 382
            MLVYQDLLTGDELLSDSFPYKE ENGILWEVEGKWV  GAVDV+IGANPS               KVVDIVDTFRLQEQP +DKK F+ Y+ ++IKLLTPKLS
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVTVGAVDVNIGANPSAEEGGEDEGVDDSTQKVVDIVDTFRLQEQPTYDKKGFIAYIKKYIKLLTPKLS 103          

HSP 2 Score: 33.113 bits (74), Expect = 5.947e-40
Identity = 15/26 (57.69%), Postives = 17/26 (65.38%), Query Frame = 1
Query:  433 FLLSKLRDLQSFVAETIHDDGCLAFA 510
            FLL +L D Q FV E +HDD  L FA
Sbjct:  120 FLLPRLSDFQFFVGEGMHDDSTLVFA 145          

HSP 3 Score: 21.557 bits (44), Expect = 5.947e-40
Identity = 9/10 (90.00%), Postives = 9/10 (90.00%), Query Frame = 3
Query:  408 KNIEGATKFL 437
            K IEGATKFL
Sbjct:  112 KGIEGATKFL 121          
BLAST of EY685079 vs. ExPASy Swiss-Prot
Match: TCTP_MEDSA (Translationally-controlled tumor protein homolog OS=Medicago sativa GN=TCTP PE=2 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 8.203e-39
Identity = 72/102 (70.59%), Postives = 80/102 (78.43%), Query Frame = 2
Query:   74 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMNRFIKLLTPKL 379
            MLVYQDLLTGDELLSDS+PYKE ENG+LWEVEGKWV +G V+VDIGAN S               KVVDIVD FRLQEQPAFDKKQF+ ++ R+IKLLTPKL
Sbjct:    1 MLVYQDLLTGDELLSDSYPYKEIENGMLWEVEGKWVTKGVVEVDIGANAS-AEGGEDEGVDDTAVKVVDIVDVFRLQEQPAFDKKQFLGFVKRYIKLLTPKL 101          

HSP 2 Score: 39.6614 bits (91), Expect = 8.203e-39
Identity = 21/35 (60.00%), Postives = 25/35 (71.43%), Query Frame = 1
Query:  433 FLLSKLRDLQSFVAETIHDDGCLAFAVLPGKVGAA 537
            +LL KL+DLQ FV E++HDDG L FA    K GAA
Sbjct:  119 YLLCKLKDLQFFVGESMHDDGSLVFAYY--KDGAA 151          

HSP 3 Score: 20.7866 bits (42), Expect = 8.203e-39
Identity = 8/10 (80.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  408 KNIEGATKFL 437
            K+IEGATK+L
Sbjct:  111 KHIEGATKYL 120          
BLAST of EY685079 vs. ExPASy Swiss-Prot
Match: TCTP_BRAOL (Translationally-controlled tumor protein homolog OS=Brassica oleracea GN=TCTP PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.343e-38
Identity = 70/103 (67.96%), Postives = 79/103 (76.70%), Query Frame = 2
Query:   74 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMNRFIKLLTPKLS 382
            MLVY DLLTGDELLSDSFPYKE ENGILWEVEGKW  +G V+V+IGANPS               KVVDIVDTFRLQEQP +DKK F+ Y+ ++IKLLTPKL+
Sbjct:    1 MLVYTDLLTGDELLSDSFPYKEIENGILWEVEGKWTTKGCVEVNIGANPSAEEGGEDEGVDDSVEKVVDIVDTFRLQEQPTYDKKGFIAYIKKYIKLLTPKLT 103          

HSP 2 Score: 34.6538 bits (78), Expect = 2.343e-38
Identity = 15/26 (57.69%), Postives = 18/26 (69.23%), Query Frame = 1
Query:  433 FLLSKLRDLQSFVAETIHDDGCLAFA 510
            FLL KL+D Q FV E +HDD  + FA
Sbjct:  120 FLLPKLKDFQFFVGEGMHDDSTIVFA 145          

HSP 3 Score: 21.557 bits (44), Expect = 2.343e-38
Identity = 9/10 (90.00%), Postives = 9/10 (90.00%), Query Frame = 3
Query:  408 KNIEGATKFL 437
            K IEGATKFL
Sbjct:  112 KGIEGATKFL 121          
BLAST of EY685079 vs. ExPASy Swiss-Prot
Match: TCTP_PSEMZ (Translationally-controlled tumor protein homolog OS=Pseudotsuga menziesii GN=TCTP PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 6.253e-38
Identity = 73/103 (70.87%), Postives = 80/103 (77.67%), Query Frame = 2
Query:   74 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMNRFIKLLTPKLS 382
            M+VYQDLL+GDELLSDSFPYKE  NG+LWEVEGKWVVQGAVDVDIGANPS               KVVDIVDTFRLQEQP FDKKQF+ ++ R+IK L  KLS
Sbjct:    1 MIVYQDLLSGDELLSDSFPYKELYNGVLWEVEGKWVVQGAVDVDIGANPS-AEGGDEEGVKIRLVKVVDIVDTFRLQEQPPFDKKQFLGFIKRYIKNLATKLS 102          

HSP 2 Score: 36.965 bits (84), Expect = 6.253e-38
Identity = 16/25 (64.00%), Postives = 20/25 (80.00%), Query Frame = 1
Query:  436 LLSKLRDLQSFVAETIHDDGCLAFA 510
            L+SKL DLQ FV E++HDDG + FA
Sbjct:  120 LVSKLSDLQFFVGESMHDDGSMVFA 144          
BLAST of EY685079 vs. ExPASy Swiss-Prot
Match: TCTP_TOBAC (Translationally-controlled tumor protein homolog OS=Nicotiana tabacum GN=TCTP PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.759e-37
Identity = 72/102 (70.59%), Postives = 79/102 (77.45%), Query Frame = 2
Query:   74 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMNRFIKLLTPKL 379
            MLVYQDLL+GDEL SDSF Y E  NG+LWEV+GKWVVQGAVDV+IGANPS               KVVDIVDTFRLQEQP+FDKKQFV YM ++IK LTPKL
Sbjct:    1 MLVYQDLLSGDELPSDSFSYTELGNGVLWEVQGKWVVQGAVDVNIGANPSAEGADEDEGVDDQAIKVVDIVDTFRLQEQPSFDKKQFVAYMKKYIKNLTPKL 102          

HSP 2 Score: 31.5722 bits (70), Expect = 6.759e-37
Identity = 15/26 (57.69%), Postives = 19/26 (73.08%), Query Frame = 1
Query:  433 FLLSKLRDLQSFVAETIHDDGCLAFA 510
            +LLSKL DLQ FV E++ DD  + FA
Sbjct:  120 YLLSKLSDLQFFVGESMADDTGMVFA 145          
BLAST of EY685079 vs. ExPASy Swiss-Prot
Match: TCTP_MAIZE (Translationally-controlled tumor protein homolog OS=Zea mays GN=TCTP PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 9.208e-37
Identity = 71/102 (69.61%), Postives = 77/102 (75.49%), Query Frame = 2
Query:   74 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMNRFIKLLTPKL 379
            MLVYQDLL+GDELLSDSF YKE ENG+LWEVEGKWV QG VDVDIGANPS               KVVDIVDTFRLQEQP FDKK FV+Y+ ++IK LT  L
Sbjct:    1 MLVYQDLLSGDELLSDSFTYKELENGVLWEVEGKWVTQGPVDVDIGANPS-AEGGEDESVDDTAVKVVDIVDTFRLQEQPPFDKKSFVSYIKKYIKNLTAVL 101          

HSP 2 Score: 36.965 bits (84), Expect = 9.208e-37
Identity = 17/26 (65.38%), Postives = 21/26 (80.77%), Query Frame = 1
Query:  433 FLLSKLRDLQSFVAETIHDDGCLAFA 510
            FLLSKL+DLQ FV E++ DD  +AFA
Sbjct:  119 FLLSKLKDLQFFVGESMKDDASVAFA 144          

HSP 3 Score: 21.1718 bits (43), Expect = 9.208e-37
Identity = 8/10 (80.00%), Postives = 9/10 (90.00%), Query Frame = 3
Query:  408 KNIEGATKFL 437
            K +EGATKFL
Sbjct:  111 KGVEGATKFL 120          
BLAST of EY685079 vs. ExPASy Swiss-Prot
Match: TCTP_CUCME (Translationally-controlled tumor protein homolog OS=Cucumis melo GN=TCTP PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.303e-36
Identity = 69/102 (67.65%), Postives = 80/102 (78.43%), Query Frame = 2
Query:   74 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMNRFIKLLTPKL 379
            MLVYQDL++GDELLSDSFPYKE ENG++WEVEGKWVV+GAVDVDIGANPS               KVVDIVDTFRLQEQP+ DKK F++ + ++IK LTP L
Sbjct:    1 MLVYQDLVSGDELLSDSFPYKEIENGMIWEVEGKWVVKGAVDVDIGANPSAEGGGEDEGVDDQAVKVVDIVDTFRLQEQPSMDKKVFLSCIKKYIKKLTPLL 102          

HSP 2 Score: 31.5722 bits (70), Expect = 7.303e-36
Identity = 13/26 (50.00%), Postives = 19/26 (73.08%), Query Frame = 1
Query:  433 FLLSKLRDLQSFVAETIHDDGCLAFA 510
            +LL K++DLQ FV E++ DD  + FA
Sbjct:  120 YLLPKVKDLQFFVGESMADDSAMVFA 145          
BLAST of EY685079 vs. ExPASy Swiss-Prot
Match: TCTP_GIBZE (Translationally-controlled tumor protein homolog OS=Gibberella zeae GN=FG02523 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.067e-12
Identity = 42/102 (41.18%), Postives = 63/102 (61.76%), Query Frame = 2
Query:   74 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMNRFIKLLTPKL 379
            ML+Y D+L GDEL+SDS+  KE + GI++E +   + +GAV+V+IGAN S               KV +IV++FRLQ    FDKK ++ Y+  ++K +  KL
Sbjct:    1 MLIYNDILNGDELISDSYDLKEVD-GIVYEADCAMIEEGAVEVNIGANAS--AEEAAEDLDDGAVKVNNIVNSFRLQ-STTFDKKSYLAYLKGYMKAIKAKL 98          
BLAST of EY685079 vs. ExPASy Swiss-Prot
Match: TCTP_CRYNE (Translationally-controlled tumor protein homolog OS=Cryptococcus neoformans GN=CNM01460 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.013e-12
Identity = 42/102 (41.18%), Postives = 62/102 (60.78%), Query Frame = 2
Query:   74 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMNRFIKLLTPKL 379
            ML+YQD+LTGDE++SD+FP KE    I +EV+   ++    DVDIG NPS               +V ++V +FRLQ   +FDKK ++TY+  ++K +  KL
Sbjct:    1 MLIYQDVLTGDEMISDAFPIKEI-GDIAYEVDCANIIIKEGDVDIGGNPS--AEEAAEALEEGAQQVNNVVHSFRLQ-STSFDKKSYLTYLKGYMKAIKSKL 98          
The following BLAST results are available for this feature:
BLAST of EY685079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
TCTP_WHEAT3.147e-4070.59Translationally-controlled tumor protein homolog O... [more]
TCTP_ARATH5.947e-4072.82Translationally-controlled tumor protein homolog O... [more]
TCTP_MEDSA8.203e-3970.59Translationally-controlled tumor protein homolog O... [more]
TCTP_BRAOL2.343e-3867.96Translationally-controlled tumor protein homolog O... [more]
TCTP_PSEMZ6.253e-3870.87Translationally-controlled tumor protein homolog O... [more]
TCTP_TOBAC6.759e-3770.59Translationally-controlled tumor protein homolog O... [more]
TCTP_MAIZE9.208e-3769.61Translationally-controlled tumor protein homolog O... [more]
TCTP_CUCME7.303e-3667.65Translationally-controlled tumor protein homolog O... [more]
TCTP_GIBZE2.067e-1241.18Translationally-controlled tumor protein homolog O... [more]
TCTP_CRYNE6.013e-1241.18Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-E03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685079 ID=EY685079; Name=EY685079; organism=Citrus sinensis; type=EST; length=994bp
CGGACGCGTGGGTCTCTCCAGTTTTCTCCGTTGATTATTTTTCTTTTTTG
TGTTCGCGAGAGAGACTGCAATCATGTTGGTCTATCAAGATCTCCTCACC
GGTGATGAGCTTCTCTCCGACTCTTTTCCCTACAAGGAAACTGAGAATGG
GATTCTGTGGGAAGTTGAGGGAAAGTGGGTTGTACAAGGAGCCGTTGATG
TTGACATTGGTGCAAATCCTTCTGCCGAAGGAGCTGATGAGGATGAGGGT
GTTGATGACCAAGCCGTGAAGGTGGTCGACATTGTCGACACATTCAGGCT
GCAGGAGCAACCTGCTTTTGACAAGAAGCAGTTTGTAACATACATGAACA
GATTCATCAAGTTGCTGACGCCCAAGCTGAGTGAGGAGAGGCAGGAGATG
TGTGAGGAAGAATATTGAGGGAGCGACCAAGTTTCTTGCTCTCCAAACTC
AGAGACCTTCAATCCTTTGTTGCGGAAACCATCCACGATGATGGCTGTCT
TGCTTTTGCTGTACTGCCCGGAAAGGTGGGGGCGGCCCCCACCTGATCTC
TTGCTGCCTCACCCAATTGCGGGGACCCAGACCCCTCCCGCCCCGCATCC
AAGGAGCACGCAGACCCCCCGCCACCACACTCGTAAGTGCAGGGTCCACA
CCCGTCAACTCCGACTCGCGCACACCACGACCACACGCCGCATACATCCG
CGGCATGTGAAGGAGTCCATCAGCTCTCATCCTCACGACCCCTACCCGAC
ACCGCCCTCGCGCCAGCGCTTCCCTCCTCGCCGCCCGTGAACCCGGCGCC
CCCTTCCCCGCAAGCCTCCTCATACCAATGATTGCCACGCCGGGAACTAC
AGGCGCGAGACCCGCACGACCCCCAGCTCGCACACAGATCCGAAGAAAAG
AGTGACACGGCCTACCGATAACGCAGAACCCACCTCATGCGACCACCGCG
GCAAAAACGCCCACAACCACAACAGGTAGGCATCAGAACAGTCC
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