EY685079

Overview
NameEY685079
Unique NameEY685079
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length994
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY685079 vs. ExPASy Swiss-Prot
Match: TCTP_NEUCR (Translationally-controlled tumor protein homolog OS=Neurospora crassa GN=NCU06464 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.750e-11
Identity = 40/96 (41.67%), Postives = 59/96 (61.46%), Query Frame = 2 
Query:   74 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMNRFIK 361
            ML+Y D++TGDE++SDS+  KE + GI +EV+   + +GAV VDIGAN S               KV ++V +FRLQ    FDKK ++ Y+  ++K
Sbjct:    1 MLIYSDIITGDEIISDSYDLKEVD-GIAYEVDCAMIEEGAVQVDIGANAS--AEEADEALDDGVVKVNNVVHSFRLQ-STQFDKKGYLVYLKGYMK 92
[Close]
BLAST of EY685079 vs. ExPASy Swiss-Prot
Match: TCTP_DANRE (Translationally-controlled tumor protein homolog OS=Danio rerio GN=tpt1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.090e-11
Identity = 39/105 (37.14%), Postives = 60/105 (57.14%), Query Frame = 2 
Query:   74 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMNRFIKLLTPKL 379
            M++Y+D++TGDE+ SD +  KE+ENG++ EVEGK + +   D+D   IG N S                 VDIV   +LQE  ++DKK +  Y+  ++K +  KL
Sbjct:    1 MIIYKDIITGDEMFSDIYKIKESENGMMLEVEGKMITRAEGDIDDALIGGNASAEVADEGCDSTSVSG--VDIVLNHKLQE-TSYDKKSYTAYIKDYMKAVKAKL 102
The following BLAST results are available for this feature:
BLAST of EY685079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
TCTP_NEUCR1.750e-1141.67Translationally-controlled tumor protein homolog O... [more]
TCTP_DANRE5.090e-1137.14Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-E03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685079 ID=EY685079; Name=EY685079; organism=Citrus sinensis; type=EST; length=994bp
CGGACGCGTGGGTCTCTCCAGTTTTCTCCGTTGATTATTTTTCTTTTTTG
TGTTCGCGAGAGAGACTGCAATCATGTTGGTCTATCAAGATCTCCTCACC
GGTGATGAGCTTCTCTCCGACTCTTTTCCCTACAAGGAAACTGAGAATGG
GATTCTGTGGGAAGTTGAGGGAAAGTGGGTTGTACAAGGAGCCGTTGATG
TTGACATTGGTGCAAATCCTTCTGCCGAAGGAGCTGATGAGGATGAGGGT
GTTGATGACCAAGCCGTGAAGGTGGTCGACATTGTCGACACATTCAGGCT
GCAGGAGCAACCTGCTTTTGACAAGAAGCAGTTTGTAACATACATGAACA
GATTCATCAAGTTGCTGACGCCCAAGCTGAGTGAGGAGAGGCAGGAGATG
TGTGAGGAAGAATATTGAGGGAGCGACCAAGTTTCTTGCTCTCCAAACTC
AGAGACCTTCAATCCTTTGTTGCGGAAACCATCCACGATGATGGCTGTCT
TGCTTTTGCTGTACTGCCCGGAAAGGTGGGGGCGGCCCCCACCTGATCTC
TTGCTGCCTCACCCAATTGCGGGGACCCAGACCCCTCCCGCCCCGCATCC
AAGGAGCACGCAGACCCCCCGCCACCACACTCGTAAGTGCAGGGTCCACA
CCCGTCAACTCCGACTCGCGCACACCACGACCACACGCCGCATACATCCG
CGGCATGTGAAGGAGTCCATCAGCTCTCATCCTCACGACCCCTACCCGAC
ACCGCCCTCGCGCCAGCGCTTCCCTCCTCGCCGCCCGTGAACCCGGCGCC
CCCTTCCCCGCAAGCCTCCTCATACCAATGATTGCCACGCCGGGAACTAC
AGGCGCGAGACCCGCACGACCCCCAGCTCGCACACAGATCCGAAGAAAAG
AGTGACACGGCCTACCGATAACGCAGAACCCACCTCATGCGACCACCGCG
GCAAAAACGCCCACAACCACAACAGGTAGGCATCAGAACAGTCC
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