EY685043

Overview
NameEY685043
Unique NameEY685043
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length967
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685043 vs. ExPASy Swiss-Prot
Match: VPS29_SCHPO (Vacuolar protein sorting-associated protein 29 OS=Schizosaccharomyces pombe GN=vps29 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 3.699e-43
Identity = 83/181 (45.86%), Postives = 125/181 (69.06%), Query Frame = 1
Query:  106 VLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGA--FSSITYD--VNPSFVLMDIDGLRVVVYVYELIDGEVKVDKI 636
            +LVL +GD HIP RA  L  KF+ +L+PGKI  I+C GNL    V++YLK +C DL +++G +D  ++ P    +T+G FK+G  +GH V+P    ++L++L R++D DIL+ G TH+F AY+ +G   +NPGSATGA   S++  D  + PSFVLMD+ G  +++YVY + DGEV+V+K+
Sbjct:    1 MLVLVIGDFHIPDRAPKLSEKFRQLLIPGKISQIICLGNLTSTSVYEYLKHVCSDLKLVKGAFDISSKAPIAGKITLGSFKIGYTNGHLVVPQDSPEALSILAREMDADILLFGGTHKFAAYELDGCFFVNPGSATGAPNVSAVEDDEKIVPSFVLMDVQGAVLILYVYRIFDGEVRVEKM 181          
BLAST of EY685043 vs. ExPASy Swiss-Prot
Match: PEP11_YEAST (Vacuolar protein sorting-associated protein 29 OS=Saccharomyces cerevisiae GN=VPS29 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.909e-23
Identity = 73/174 (41.95%), Postives = 93/174 (53.45%), Query Frame = 1
Query:  106 VLVLALGDLHIPHRAADLPAKFKSML-VPGKIQHIVCTGNLCIKEVHDYLKI---ICPDLHIIRGEYDEETRYPETKT------------------LTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSS---ITYDVNPS 552
            +L+LAL D HIP RA DLP KFK +L VP KI  +   GN    + +D+LK    I  ++ I+RGE+D     P TK                   +  G  K+G C G+ V+P  D  SL  L RQLDVDIL+ G TH   AY  EG   +NPGS TGAF++   I +DV  S
Sbjct:    1 MLLLALSDAHIPDRATDLPVKFKKLLSVPDKISQVALLGNST--KSYDFLKFVNQISNNITIVRGEFDNG-HLPSTKKDKASDNSRPMEEIPMNSIIRQGALKIGCCSGYTVVPKNDPLSLLALARQLDVDILLWGGTHNVEAYTLEGKFFVNPGSCTGAFNTDWPIVFDVEDS 171          
BLAST of EY685043 vs. ExPASy Swiss-Prot
Match: Y1774_METTH (Putative metallophosphoesterase MTH_1774 OS=Methanobacterium thermoautotrophicum GN=MTH_1774 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.586e-12
Identity = 50/160 (31.25%), Postives = 85/160 (53.12%), Query Frame = 1
Query:  106 VLVLALGDLHIPHRAADLP-AKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEE--TRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDG 576
            +L+  + D HIP RA+++P A F +      ++ I+  G+L   ++   L+ + P +  ++G  D       P ++   I  F++GL HG +V P GD   L  L  +L  D+L++GHTHQ    + E  V++NPGS T     +    +PS +++ IDG
Sbjct:    1 MLIGVISDTHIPDRASEIPEAVFDAFR---DVELILHAGDLTSPDILTELETLAP-VECVQGNMDRHYGIETPRSRLFEIESFRVGLIHG-EVYPRGDTQQLRYLGLELGADVLISGHTHQPFIRELEDMVLLNPGSPT-----VPRLTDPSVMVLRIDG 150          
The following BLAST results are available for this feature:
BLAST of EY685043 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
VPS29_SCHPO3.699e-4345.86Vacuolar protein sorting-associated protein 29 OS=... [more]
PEP11_YEAST1.909e-2341.95Vacuolar protein sorting-associated protein 29 OS=... [more]
Y1774_METTH2.586e-1231.25Putative metallophosphoesterase MTH_1774 OS=Methan... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-A05-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685043 ID=EY685043; Name=EY685043; organism=Citrus sinensis; type=EST; length=967bp
AGAAAACGACGACAGAGGTTTTGAATTTTGATGGGCGTTGTCAAAAGAGC
TCCTAAATAATCAAATCTCCCTGGGGTTTGAGCTGATAGTCGAACGTTGA
AGATGGTGTTGGTCTTAGCGTTGGGCGATTTGCACATACCACATAGAGCA
GCTGATTTGCCTGCCAAGTTTAAGTCCATGCTTGTTCCTGGCAAGATCCA
ACACATCGTTTGCACCGGCAATCTCTGCATCAAAGAAGTTCATGACTACC
TAAAGATTATTTGTCCTGACTTGCATATTATTCGTGGTGAATATGATGAA
GAGACACGATATCCTGAGACCAAAACGCTAACTATTGGTCAATTCAAACT
AGGACTGTGCCATGGTCATCAGGTTATTCCGTGGGGGGACCTAGACTCAC
TAGCCATGTTACAGAGGCAGCTGGATGTAGACATACTTGTGACTGGTCAC
ACTCATCAGTTTACTGCTTATAAACACGAGGGAGGTGTGGTTATAAACCC
AGGTTCTGCCACCGGTGCTTTCAGCAGCATCACCTACGATGTTAATCCAA
GTTTCGTCCTCATGGATATCGATGGCCTGCGGGTTGTGGTCTATGTTTAT
GAACTCATTGATGGGGAGGTTAAAGTTGACAAGATTTGATTTTAAGAAAA
CCAGCACCTGTCCCTCTGCCTCCTTACAAACAATGCTCCGAATTTCAATT
TTGGTGGAACGGCTCTCCGGATCCCCCTATTTGGGGTGATCCTGCTATAA
TTGGATTCCCTTCTCCTGGCGGGGGCTGGGAAGATTTTGGGTTAGAGAAC
CGAACAAAAGAGACGACGCTACAGAGCAACAACACGAGCGACACAAGACA
GCAAATGGTAGTGGAAAGCGTGAGCAGAGAATACTCAAGAGAGCGAAAAC
GAGAACAAATGGGGGGGGACGCCTGCCAAAGACCGTGCCGGAGTGCCTTG
GACGGAGGGCTAGGGGC
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