EY684967

Overview
NameEY684967
Unique NameEY684967
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684967 vs. ExPASy Swiss-Prot
Match: CALM_FAGSY (Calmodulin OS=Fagus sylvatica GN=CAMF1 PE=2 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 2.062e-13
Identity = 43/137 (31.39%), Postives = 73/137 (53.28%), Query Frame = 2
Query:  119 ETVQSEQLKQLKDIFMRFDMDSDGSXXXXXXXXXXXXXXXKPTGDQLHILLADMDSNGNGLVEFNELVALILPDISEQVLINQKQLMEVFRSFDRDGNGHITAAELAGSMAKMGHPLTYGELSEMMREGQPNDNGRI 529
            + +  +Q+ + K+ F  FD D DG                 PT  +L  ++ ++D +GNG ++F E + L+   + +    ++++L E FR FD+D NG I+AAEL   M  +G  LT  E+ EM+RE   + +G+I
Sbjct:    3 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDRDGNGTIDFPEFLNLMARKMKDTD--SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT-DEVDEMIREADVDGDGQI 136          
BLAST of EY684967 vs. ExPASy Swiss-Prot
Match: CML6_ORYSJ (Putative calmodulin-like protein 6 OS=Oryza sativa subsp. japonica GN=CML6 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.693e-13
Identity = 38/136 (27.94%), Postives = 73/136 (53.68%), Query Frame = 2
Query:  125 VQSEQLKQLKDIFMRFDMDSDGSXXXXXXXXXXXXXXXKPTGDQLHILLADMDSNGNGLVEFNELVALILPDISEQVL-INQKQLMEVFRSFDRDGNGHITAAELAGSMAKMGHPLTYGELSEMMREGQPNDNGRI 529
            +  +Q+   +D F  FD ++DG                 P+ + L  ++  +D +GNG +EF+E +A++   + E     ++++L + FR FD+D NG I+  EL+  MA +G  +T  E+ +MM+    N++G++
Sbjct:    5 LNEQQISDFRDAFSLFDKNNDGCISREELATVLTRLGMAPSQEDLQDMIVAVDEDGNGTIEFDEFLAIMKKKLYENDKGDDEEELRKAFRIFDKDDNGFISRNELSMVMASLGEEMTEDEIDDMMKAADSNNDGQV 140          
BLAST of EY684967 vs. ExPASy Swiss-Prot
Match: CML3_ORYSJ (Calmodulin-like protein 3 OS=Oryza sativa subsp. japonica GN=CML3 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.693e-13
Identity = 49/176 (27.84%), Postives = 87/176 (49.43%), Query Frame = 2
Query:  116 METVQSEQLKQLKDIFMRFDMDSDGSXXXXXXXXXXXXXXXKPTGDQLHILLADMDSNGNGLVEFNELVALILPDISEQVLINQKQLMEVFRSFDRDGNGHITAAELAGSMAKMGHPLTYGELSEMMREGQPNDNGRIILVSPNTL*KKLI----HNYTGLKLRGGHPSTQTKKKN 631
            M+ +  EQ+ + ++ F  FD D DG+                PT  +L  ++ ++D++G+G +EF E + L+   + +     +  + + FR FD+D NG IT  EL   MA +  PL+  EL++M+ E   + +G+I   + N   K ++     N       GGH S+ + KK+
Sbjct:    1 MDHLTKEQIAEFREAFNLFDKDGDGTITSKELGTVMGSLGQSPTEAELKKMVEEVDADGSGSIEFEEFLGLLARKLRDTGA--EDDIRDAFRVFDKDQNGFITPDELRHVMANLSDPLSDDELADMLHEADSDGDGQI---NYNEFLKVMMAKRRQNMMEGHGSGGHRSSNSHKKS 171          
BLAST of EY684967 vs. ExPASy Swiss-Prot
Match: TNNC2_MOUSE (Troponin C, skeletal muscle OS=Mus musculus GN=Tnnc2 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.023e-12
Identity = 38/136 (27.94%), Postives = 70/136 (51.47%), Query Frame = 2
Query:  125 VQSEQLKQLKDIFMRFDMDSDGSXXXXXXXXXXXXXXXKPTGDQLHILLADMDSNGNGLVEFNELVALILPDISEQVL-INQKQLMEVFRSFDRDGNGHITAAELAGSMAKMGHPLTYGELSEMMREGQPNDNGRI 529
            +  E + + K  F  FD D  G                 PT ++L  ++ ++D +G+G ++F E + +++  + E     ++++L E FR FDR+ +G+I A ELA      G  +T  E+  +M++G  N++GRI
Sbjct:   12 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTEEEIESLMKDGDKNNDGRI 147          
BLAST of EY684967 vs. ExPASy Swiss-Prot
Match: CALM_KLULA (Calmodulin OS=Kluyveromyces lactis GN=CMD1 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.023e-12
Identity = 42/130 (32.31%), Postives = 73/130 (56.15%), Query Frame = 2
Query:  119 ETVQSEQLKQLKDIFMRFDMDSDGSXXXXXXXXXXXXXXXKPTGDQLHILLADMDSNGNGLVEFNELVALILPDISEQVLIN--QKQLMEVFRSFDRDGNGHITAAELAGSMAKMGHPLTYGELSEMMRE 502
            + +  EQ+ + K+ F  FD D+ GS                P+  ++  L+ ++D +GN  +EF+E +AL+    S Q+  N  +++L+E F+ FD++G+G I+AAEL   +  +G  LT  E+ EM+RE
Sbjct:    3 QNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALM----SRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLRE 128          
BLAST of EY684967 vs. ExPASy Swiss-Prot
Match: TNNC2_RABIT (Troponin C, skeletal muscle OS=Oryctolagus cuniculus GN=TNNC2 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.337e-12
Identity = 38/136 (27.94%), Postives = 70/136 (51.47%), Query Frame = 2
Query:  125 VQSEQLKQLKDIFMRFDMDSDGSXXXXXXXXXXXXXXXKPTGDQLHILLADMDSNGNGLVEFNELVALILPDISEQVL-INQKQLMEVFRSFDRDGNGHITAAELAGSMAKMGHPLTYGELSEMMREGQPNDNGRI 529
            +  E + + K  F  FD D  G                 PT ++L  ++ ++D +G+G ++F E + +++  + E     ++++L E FR FDR+ +G+I A ELA      G  +T  E+  +M++G  N++GRI
Sbjct:   12 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRI 147          
BLAST of EY684967 vs. ExPASy Swiss-Prot
Match: TNNC2_ANGAN (Troponin C, skeletal muscle OS=Anguilla anguilla PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.337e-12
Identity = 36/136 (26.47%), Postives = 70/136 (51.47%), Query Frame = 2
Query:  125 VQSEQLKQLKDIFMRFDMDSDGSXXXXXXXXXXXXXXXKPTGDQLHILLADMDSNGNGLVEFNELVALILPDISE-QVLINQKQLMEVFRSFDRDGNGHITAAELAGSMAKMGHPLTYGELSEMMREGQPNDNGRI 529
            +  E + + K  F  FD D  G                 PT ++L  ++ ++D +G+G ++F E + +++  + E Q   ++++L E FR FD++G+G I   E    +   G P++  E+ E+M +G  N++G+I
Sbjct:   12 LSEEMIAEFKAAFDMFDTDGGGDISTKELGTVMRMLGQNPTREELDAIIEEVDEDGSGTIDFEEFLVMMVRQLKEDQAGKSEEELAEFFRVFDKNGDGFIDREEFGEILRSSGEPVSEEEIDELMADGDKNNDGKI 147          
BLAST of EY684967 vs. ExPASy Swiss-Prot
Match: CML5_ORYSJ (Calmodulin-like protein 5 OS=Oryza sativa subsp. japonica GN=CML5 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.746e-12
Identity = 44/145 (30.34%), Postives = 73/145 (50.34%), Query Frame = 2
Query:  125 VQSEQLKQLKDIFMRFDMDSDGSXXXXXXXXXXXXXXXKPTGDQLHILLADMDSNGNGLVEFNELVALILPDIS----------EQVLINQKQLMEVFRSFDRDGNGHITAAELAGSMAKMGHPLTYGELSEMMREGQPNDNGRI 529
            V+ EQ+ + ++ F  FD D DG                 PT ++L  ++ D+D +GNG +EF E +AL+    S          +      ++L E F+ FD+D +G I+AAEL   M  +G  LT  E+ +M+RE   + +G++
Sbjct:    8 VRQEQVAEFRETFAFFDKDGDGCITLEELDTVVRSLGQTPTREELAEMIRDVDVDGNGTIEFAEFLALMARKASRGGENGGGGDDSGDAADEELREAFKVFDKDQDGLISAAELRHVMISLGEKLTDEEVEQMIREADLDGDGQV 152          
BLAST of EY684967 vs. ExPASy Swiss-Prot
Match: TNNC2_RANES (Troponin C, skeletal muscle OS=Rana esculenta PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.280e-12
Identity = 36/142 (25.35%), Postives = 72/142 (50.70%), Query Frame = 2
Query:  107 MTVMETVQSEQLKQLKDIFMRFDMDSDGSXXXXXXXXXXXXXXXKPTGDQLHILLADMDSNGNGLVEFNELVALILPDISEQVL-INQKQLMEVFRSFDRDGNGHITAAELAGSMAKMGHPLTYGELSEMMREGQPNDNGRI 529
            M     +  E + + K  F  FD D  G                 PT ++L  ++ ++D +G+G ++F E + +++  + E     ++++L E FR FD++ +G+I + EL   +   G  +T  E+ E+M++G  N++G+I
Sbjct:    8 MDARSFLSEEMIAEFKAAFDMFDTDGGGDISTKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAQGKSEEELAECFRIFDKNADGYIDSEELGEILRSSGESITDEEIEELMKDGDKNNDGKI 149          
BLAST of EY684967 vs. ExPASy Swiss-Prot
Match: CALM_YEAST (Calmodulin OS=Saccharomyces cerevisiae GN=CMD1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.280e-12
Identity = 41/125 (32.80%), Postives = 73/125 (58.40%), Query Frame = 2
Query:  134 EQLKQLKDIFMRFDMDSDGSXXXXXXXXXXXXXXXKPTGDQLHILLADMDSNGNGLVEFNELVALILPDISEQVLIN--QKQLMEVFRSFDRDGNGHITAAELAGSMAKMGHPLTYGELSEMMRE 502
            EQ+ + K+ F  FD D++GS                P+  +++ L+ ++D +GN  +EF+E +AL+    S Q+  N  +++L+E F+ FD++G+G I+AAEL   +  +G  LT  E+ +M+RE
Sbjct:    8 EQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM----SRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLRE 128          
The following BLAST results are available for this feature:
BLAST of EY684967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
CALM_FAGSY2.062e-1331.39Calmodulin OS=Fagus sylvatica GN=CAMF1 PE=2 SV=3[more]
CML6_ORYSJ2.693e-1327.94Putative calmodulin-like protein 6 OS=Oryza sativa... [more]
CML3_ORYSJ2.693e-1327.84Calmodulin-like protein 3 OS=Oryza sativa subsp. j... [more]
TNNC2_MOUSE1.023e-1227.94Troponin C, skeletal muscle OS=Mus musculus GN=Tnn... [more]
CALM_KLULA1.023e-1232.31Calmodulin OS=Kluyveromyces lactis GN=CMD1 PE=3 SV... [more]
TNNC2_RABIT1.337e-1227.94Troponin C, skeletal muscle OS=Oryctolagus cunicul... [more]
TNNC2_ANGAN1.337e-1226.47Troponin C, skeletal muscle OS=Anguilla anguilla P... [more]
CML5_ORYSJ1.746e-1230.34Calmodulin-like protein 5 OS=Oryza sativa subsp. j... [more]
TNNC2_RANES2.280e-1225.35Troponin C, skeletal muscle OS=Rana esculenta PE=1... [more]
CALM_YEAST2.280e-1232.80Calmodulin OS=Saccharomyces cerevisiae GN=CMD1 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-007-A03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684967 ID=EY684967; Name=EY684967; organism=Citrus sinensis; type=EST; length=890bp
AAAAAAAAGAACACAAAACACAACCTTTTTTTTTTTTTTCTTTTTCTTTT
TTTTTTCTTGAATCTTATTTTTCTTTCACCCCATTCCCATATATCTTTAA
TCAACAATGACGGTGATGGAAACAGTTCAATCGGAGCAACTGAAGCAGCT
CAAAGACATATTCATGCGTTTCGACATGGACTCGGACGGCAGCCTCACGC
AGCTGGAACTGGCCGCACTCCTGCGTGCCCTGGGGCTCAAGCCAACCGGC
GACCAGCTGCACATTTTGTTGGCCGACATGGATTCCAACGGCAACGGCCT
CGTCGAATTCAACGAATTGGTTGCTCTGATACTCCCCGACATCAGCGAGC
AAGTCTTGATCAACCAAAAACAACTCATGGAGGTCTTTCGGTCCTTCGAT
CGCGACGGCAACGGCCACATCACTGCGGCCGAGCTCGCGGGCTCCATGGC
CAAAATGGGCCACCCTTTGACGTACGGCGAGCTATCGGAAATGATGAGGG
AGGGCCAACCCAATGACAACGGACGCATAATCTTAGTGAGTCCGAACACA
TTATGAAAAAAGCTGATCCACAACTATACCGGCCTTAAGCTTAGGGGCGG
CCACCCGAGCACCCAAACAAAAAAAAAAAACAAACGCCCATGCGACGCAG
CTGCATGGGACACAGGACCGACCCCACTCAACCCGCGAGAACACCCAAAA
GAACCCGAGAGCGGACAAGAGCGCGCCAAGATTCAAGAAGGAGACAAGAA
CGTGACAAAAGCAGAGAAAGAGAGACAGCGGGCCGGGCGGGAACGGAGTA
CGCGAGAAAAGCCCAAACGGTCAAAAATAACACACGACACAGTAAAAAAG
ACACAACACGAAACGAACACAACGACCAAAGACGGCAGAG
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