EY684967

Overview
NameEY684967
Unique NameEY684967
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684967 vs. ExPASy Swiss-Prot
Match: CALM_CANAL (Calmodulin OS=Candida albicans GN=CMD1 PE=3 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.978e-12
Identity = 36/137 (26.28%), Postives = 73/137 (53.28%), Query Frame = 2
Query:  119 ETVQSEQLKQLKDIFMRFDMDSDGSXXXXXXXXXXXXXXXKPTGDQLHILLADMDSNGNGLVEFNELVALILPDISEQVLINQKQLMEVFRSFDRDGNGHITAAELAGSMAKMGHPLTYGELSEMMREGQPNDNGRI 529
            E +  +Q+ + K+ F  FD DSDG                 P+  +L  ++ ++D N +G ++F E + ++   + +    ++ ++ E F+ FDR+G+G I+AAEL   +  +G  L+  ++ +M++E   N++G I
Sbjct:    3 EKLSEQQIAEFKEAFSLFDKDSDGKITTKELGTVMRSLGQNPSESELTDMINEVDVNSDGSIDFPEFLTMMARKMKDTD--SEAEIAEAFKVFDRNGDGKISAAELRHLLTSIGEKLSDADVDQMIKEADTNNDGEI 137          
BLAST of EY684967 vs. ExPASy Swiss-Prot
Match: TNNC2_PIG (Troponin C, skeletal muscle OS=Sus scrofa GN=TNNC2 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12
Identity = 38/136 (27.94%), Postives = 70/136 (51.47%), Query Frame = 2
Query:  125 VQSEQLKQLKDIFMRFDMDSDGSXXXXXXXXXXXXXXXKPTGDQLHILLADMDSNGNGLVEFNELVALILPDISEQVL-INQKQLMEVFRSFDRDGNGHITAAELAGSMAKMGHPLTYGELSEMMREGQPNDNGRI 529
            +  E + + K  F  FD D  G                 PT ++L  ++ ++D +G+G ++F E + +++  + E     ++++L E FR FDR+ +G+I A ELA      G  +T  E+  +M++G  N++GRI
Sbjct:   11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNMDGYIDAEELAEIFRASGEHVTDEEIESIMKDGDKNNDGRI 146          
BLAST of EY684967 vs. ExPASy Swiss-Prot
Match: CML9_ARATH (Calmodulin-like protein 9 OS=Arabidopsis thaliana GN=CML9 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12
Identity = 41/130 (31.54%), Postives = 68/130 (52.31%), Query Frame = 2
Query:  134 EQLKQLKDIFMRFDMDSDGSXXXXXXXXXXXXXXXKPTGDQLHILLADMDSNGNGLVEFNELVALILPDISEQVLINQKQLMEVFRSFDRDGNGHITAAELAGSMAKMGHPLTYGELSEMMREGQPNDNG 523
            EQ+++  + F   D DSDG                 P  +QL  +++D+D  GNG + F++ + ++  + S++   ++  L+EVFR FDRDG+G I+  EL   M  MG  +T  E   M+RE   + +G
Sbjct:    8 EQIQEFYEAFCLIDKDSDGFITKEKLTKVMKSMGKNPKAEQLQQMMSDVDIFGNGGITFDDFLYIMAQNTSQESASDE--LIEVFRVFDRDGDGLISQLELGEGMKDMGMKITAEEAEHMVREADLDGDG 135          
BLAST of EY684967 vs. ExPASy Swiss-Prot
Match: TNNC2_HUMAN (Troponin C, skeletal muscle OS=Homo sapiens GN=TNNC2 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 5.079e-12
Identity = 37/136 (27.21%), Postives = 69/136 (50.74%), Query Frame = 2
Query:  125 VQSEQLKQLKDIFMRFDMDSDGSXXXXXXXXXXXXXXXKPTGDQLHILLADMDSNGNGLVEFNELVALILPDISEQVL-INQKQLMEVFRSFDRDGNGHITAAELAGSMAKMGHPLTYGELSEMMREGQPNDNGRI 529
            +  E + + K  F  FD D  G                 PT ++L  ++ ++D +G+G ++F E + +++  + E     ++++L E FR FDR+ +G+I   ELA      G  +T  E+  +M++G  N++GRI
Sbjct:   12 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDPEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRI 147          
BLAST of EY684967 vs. ExPASy Swiss-Prot
Match: CALL_CAEEL (Calmodulin-like protein OS=Caenorhabditis elegans GN=cal-1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.079e-12
Identity = 39/139 (28.06%), Postives = 71/139 (51.08%), Query Frame = 2
Query:  113 VMETVQSEQLKQLKDIFMRFDMDSDGSXXXXXXXXXXXXXXXKPTGDQLHILLADMDSNGNGLVEFNELVALILPDISEQVLINQKQLMEVFRSFDRDGNGHITAAELAGSMAKMGHPLTYGELSEMMREGQPNDNGRI 529
            +++ +  E++ + ++ FM FD D +G+                PT  ++  ++ ++D +GNG +EF E   ++   + E    + + + E FR FD+DGNG ITA E    M  MG   +  E+ EM++E   + +G I
Sbjct:   14 IIKQLTPEEIDEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINEVDIDGNGQIEFPEFCVMMKRMMKET---DSEMIREAFRVFDKDGNGVITAQEFRYFMVHMGMQFSEEEVDEMIKEVDVDGDGEI 149          
BLAST of EY684967 vs. ExPASy Swiss-Prot
Match: CALL5_HUMAN (Calmodulin-like protein 5 OS=Homo sapiens GN=CALML5 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 8.664e-12
Identity = 41/132 (31.06%), Postives = 66/132 (50.00%), Query Frame = 2
Query:  134 EQLKQLKDIFMRFDMDSDGSXXXXXXXXXXXXXXXKPTGDQLHILLADMDSNGNGLVEFNELVALILPDISEQVLINQKQLMEVFRSFDRDGNGHITAAELAGSMAKMGHPLTYGELSEMMREGQPNDNGRI 529
            E+  Q K  F   D D +G+                 +  QL  L++++DS+G+G + F E +       +++     + L   FR+FD+DG+GHIT  EL  +MA +G PL   EL  M+RE   + +GR+
Sbjct:    8 EEEAQYKKAFSAVDTDGNGTINAQELGAALKATGKNLSEAQLRKLISEVDSDGDGEISFQEFLTA-----AKKARAGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRV 134          
BLAST of EY684967 vs. ExPASy Swiss-Prot
Match: CABP1_RAT (Calcium-binding protein 1 OS=Rattus norvegicus GN=Cabp1 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.132e-11
Identity = 40/139 (28.78%), Postives = 76/139 (54.68%), Query Frame = 2
Query:  122 TVQSEQLKQLKDIFMRFDMDSDGSXXXXXXXXXXXXXXXKPTGDQLHILLADMDSNGNGLVEFNELVALILPDISEQV--LINQKQLMEVFRSFDRDGNGHITAAELAGSMAK-MGHPLTYGELSEMMREGQPNDNGRI 529
            +++ E++++L++ F  FD D DG                 PT  +L  L   ++ N  G V+F++ V L+ P +  +   +I  K+L + FR FD +G+G I+ +EL  +M K +GH + + ++ E++R+   N +GR+
Sbjct:  149 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRV 287          
BLAST of EY684967 vs. ExPASy Swiss-Prot
Match: CABP1_MOUSE (Calcium-binding protein 1 OS=Mus musculus GN=Cabp1 PE=1 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 1.132e-11
Identity = 40/139 (28.78%), Postives = 76/139 (54.68%), Query Frame = 2
Query:  122 TVQSEQLKQLKDIFMRFDMDSDGSXXXXXXXXXXXXXXXKPTGDQLHILLADMDSNGNGLVEFNELVALILPDISEQV--LINQKQLMEVFRSFDRDGNGHITAAELAGSMAK-MGHPLTYGELSEMMREGQPNDNGRI 529
            +++ E++++L++ F  FD D DG                 PT  +L  L   ++ N  G V+F++ V L+ P +  +   +I  K+L + FR FD +G+G I+ +EL  +M K +GH + + ++ E++R+   N +GR+
Sbjct:   78 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRV 216          
BLAST of EY684967 vs. ExPASy Swiss-Prot
Match: CABP1_HUMAN (Calcium-binding protein 1 OS=Homo sapiens GN=CABP1 PE=1 SV=4)

HSP 1 Score: 70.8626 bits (172), Expect = 1.132e-11
Identity = 40/139 (28.78%), Postives = 76/139 (54.68%), Query Frame = 2
Query:  122 TVQSEQLKQLKDIFMRFDMDSDGSXXXXXXXXXXXXXXXKPTGDQLHILLADMDSNGNGLVEFNELVALILPDISEQV--LINQKQLMEVFRSFDRDGNGHITAAELAGSMAK-MGHPLTYGELSEMMREGQPNDNGRI 529
            +++ E++++L++ F  FD D DG                 PT  +L  L   ++ N  G V+F++ V L+ P +  +   +I  K+L + FR FD +G+G I+ +EL  +M K +GH + + ++ E++R+   N +GR+
Sbjct:  221 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRV 359          
BLAST of EY684967 vs. ExPASy Swiss-Prot
Match: CABP1_BOVIN (Calcium-binding protein 1 OS=Bos taurus GN=CABP1 PE=1 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 1.132e-11
Identity = 40/139 (28.78%), Postives = 76/139 (54.68%), Query Frame = 2
Query:  122 TVQSEQLKQLKDIFMRFDMDSDGSXXXXXXXXXXXXXXXKPTGDQLHILLADMDSNGNGLVEFNELVALILPDISEQV--LINQKQLMEVFRSFDRDGNGHITAAELAGSMAK-MGHPLTYGELSEMMREGQPNDNGRI 529
            +++ E++++L++ F  FD D DG                 PT  +L  L   ++ N  G V+F++ V L+ P +  +   +I  K+L + FR FD +G+G I+ +EL  +M K +GH + + ++ E++R+   N +GR+
Sbjct:   77 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRV 215          
The following BLAST results are available for this feature:
BLAST of EY684967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
CALM_CANAL2.978e-1226.28Calmodulin OS=Candida albicans GN=CMD1 PE=3 SV=2[more]
TNNC2_PIG3.889e-1227.94Troponin C, skeletal muscle OS=Sus scrofa GN=TNNC2... [more]
CML9_ARATH3.889e-1231.54Calmodulin-like protein 9 OS=Arabidopsis thaliana ... [more]
TNNC2_HUMAN5.079e-1227.21Troponin C, skeletal muscle OS=Homo sapiens GN=TNN... [more]
CALL_CAEEL5.079e-1228.06Calmodulin-like protein OS=Caenorhabditis elegans ... [more]
CALL5_HUMAN8.664e-1231.06Calmodulin-like protein 5 OS=Homo sapiens GN=CALML... [more]
CABP1_RAT1.132e-1128.78Calcium-binding protein 1 OS=Rattus norvegicus GN=... [more]
CABP1_MOUSE1.132e-1128.78Calcium-binding protein 1 OS=Mus musculus GN=Cabp1... [more]
CABP1_HUMAN1.132e-1128.78Calcium-binding protein 1 OS=Homo sapiens GN=CABP1... [more]
CABP1_BOVIN1.132e-1128.78Calcium-binding protein 1 OS=Bos taurus GN=CABP1 P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-007-A03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684967 ID=EY684967; Name=EY684967; organism=Citrus sinensis; type=EST; length=890bp
AAAAAAAAGAACACAAAACACAACCTTTTTTTTTTTTTTCTTTTTCTTTT
TTTTTTCTTGAATCTTATTTTTCTTTCACCCCATTCCCATATATCTTTAA
TCAACAATGACGGTGATGGAAACAGTTCAATCGGAGCAACTGAAGCAGCT
CAAAGACATATTCATGCGTTTCGACATGGACTCGGACGGCAGCCTCACGC
AGCTGGAACTGGCCGCACTCCTGCGTGCCCTGGGGCTCAAGCCAACCGGC
GACCAGCTGCACATTTTGTTGGCCGACATGGATTCCAACGGCAACGGCCT
CGTCGAATTCAACGAATTGGTTGCTCTGATACTCCCCGACATCAGCGAGC
AAGTCTTGATCAACCAAAAACAACTCATGGAGGTCTTTCGGTCCTTCGAT
CGCGACGGCAACGGCCACATCACTGCGGCCGAGCTCGCGGGCTCCATGGC
CAAAATGGGCCACCCTTTGACGTACGGCGAGCTATCGGAAATGATGAGGG
AGGGCCAACCCAATGACAACGGACGCATAATCTTAGTGAGTCCGAACACA
TTATGAAAAAAGCTGATCCACAACTATACCGGCCTTAAGCTTAGGGGCGG
CCACCCGAGCACCCAAACAAAAAAAAAAAACAAACGCCCATGCGACGCAG
CTGCATGGGACACAGGACCGACCCCACTCAACCCGCGAGAACACCCAAAA
GAACCCGAGAGCGGACAAGAGCGCGCCAAGATTCAAGAAGGAGACAAGAA
CGTGACAAAAGCAGAGAAAGAGAGACAGCGGGCCGGGCGGGAACGGAGTA
CGCGAGAAAAGCCCAAACGGTCAAAAATAACACACGACACAGTAAAAAAG
ACACAACACGAAACGAACACAACGACCAAAGACGGCAGAG
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