EY684967

Overview
NameEY684967
Unique NameEY684967
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684967 vs. ExPASy Swiss-Prot
Match: CABP4_MOUSE (Calcium-binding protein 4 OS=Mus musculus GN=Cabp4 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.521e-11
Identity = 46/135 (34.07%), Postives = 66/135 (48.89%), Query Frame = 2
Query:  134 EQLKQLKDIFMRFDMDSDGSXXXXXXXXXXXXXXXKPTGDQLHILLADMDSNGNGLVEFNELVALILPDISEQV--LINQKQLMEVFRSFDRDGNGHITAAEL-AGSMAKMGHPLTYGELSEMMREGQPNDNGRI 529
            E+L++L+  F  FD D DG                 PT  +L  +   +     G V+F E V LI P + E+   ++  ++L   FR FD+D +G IT AEL   + A +G PL   EL EM+RE   N +G I
Sbjct:  125 EELEELQAAFEEFDTDQDGYIGYRELGDCMRTLGYMPTEMELLEVSQHVKMRMGGFVDFEEFVELISPKLREETAHMLGVRELRIAFREFDKDRDGRITVAELRQAAPALLGEPLEGTELDEMLREMDLNGDGTI 259          
BLAST of EY684967 vs. ExPASy Swiss-Prot
Match: CABP4_HUMAN (Calcium-binding protein 4 OS=Homo sapiens GN=CABP4 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.616e-11
Identity = 46/135 (34.07%), Postives = 66/135 (48.89%), Query Frame = 2
Query:  134 EQLKQLKDIFMRFDMDSDGSXXXXXXXXXXXXXXXKPTGDQLHILLADMDSNGNGLVEFNELVALILPDISEQV--LINQKQLMEVFRSFDRDGNGHITAAELAGSM-AKMGHPLTYGELSEMMREGQPNDNGRI 529
            E+L +L+  F  FD D DG                 PT  +L  +   +     G V+F E V LI P + E+   ++  ++L   FR FDRD +G IT AEL  ++ A +G PL   EL EM+RE   N +G +
Sbjct:  129 EELDELQAAFEEFDTDRDGYISHRELGDCMRTLGYMPTEMELLEVSQHIKMRMGGRVDFEEFVELIGPKLREETAHMLGVRELRIAFREFDRDRDGRITVAELREAVPALLGEPLAGPELDEMLREVDLNGDGTV 263          
BLAST of EY684967 vs. ExPASy Swiss-Prot
Match: CML8_ORYSJ (Probable calcium-binding protein CML8 OS=Oryza sativa subsp. japonica GN=CML8 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.334e-11
Identity = 33/133 (24.81%), Postives = 70/133 (52.63%), Query Frame = 2
Query:  131 SEQLKQLKDIFMRFDMDSDGSXXXXXXXXXXXXXXXKPTGDQLHILLADMDSNGNGLVEFNELVALILPDISEQVLINQKQLMEVFRSFDRDGNGHITAAELAGSMAKMGHPLTYGELSEMMREGQPNDNGRI 529
            +++ K++K+ F  FD D  G+               + T +Q+H ++A++D +G+G ++F+E V ++   + E+    +++L + F+  D+D NG I+  ++     + G P T  E+ EM+     N +G +
Sbjct:   42 AQKRKEIKEAFDLFDTDGSGTIDPKELNVAMRALGFEMTPEQIHQMIAEVDKDGSGTIDFDEFVHMMTDKMGERDA--REELNKAFKIIDKDNNGKISDVDIQRLAIETGEPFTLDEVREMIEAADENGDGEV 172          
BLAST of EY684967 vs. ExPASy Swiss-Prot
Match: CATR_NAEGR (Caltractin OS=Naegleria gruberi GN=CTN PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.334e-11
Identity = 39/132 (29.55%), Postives = 70/132 (53.03%), Query Frame = 2
Query:  134 EQLKQLKDIFMRFDMDSDGSXXXXXXXXXXXXXXXKPTGDQLHILLADMDSNGNGLVEFNELVALILPDISEQVLINQKQLMEVFRSFDRDGNGHITAAELAGSMAKMGHPLTYGELSEMMREGQPNDNGRI 529
            EQ +++K+ F  FDMD  G                +P  +++  +++ +D NG+G ++FN+ + L+   +SE+   +  ++M+ FR FD D +G IT A L      +G  +T  EL EM+ E   ++ G+I
Sbjct:   29 EQRQEIKEAFDLFDMDGSGKIDAKELKVAMRALGFEPKKEEIKKMISGID-NGSGKIDFNDFLQLMTAKMSEK--DSHAEIMKAFRLFDEDDSGFITFANLKRVAKDLGENMTDEELREMIEEADRSNQGQI 157          
The following BLAST results are available for this feature:
BLAST of EY684967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
CABP4_MOUSE2.521e-1134.07Calcium-binding protein 4 OS=Mus musculus GN=Cabp4... [more]
CABP4_HUMAN5.616e-1134.07Calcium-binding protein 4 OS=Homo sapiens GN=CABP4... [more]
CML8_ORYSJ7.334e-1124.81Probable calcium-binding protein CML8 OS=Oryza sat... [more]
CATR_NAEGR7.334e-1129.55Caltractin OS=Naegleria gruberi GN=CTN PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-007-A03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684967 ID=EY684967; Name=EY684967; organism=Citrus sinensis; type=EST; length=890bp
AAAAAAAAGAACACAAAACACAACCTTTTTTTTTTTTTTCTTTTTCTTTT
TTTTTTCTTGAATCTTATTTTTCTTTCACCCCATTCCCATATATCTTTAA
TCAACAATGACGGTGATGGAAACAGTTCAATCGGAGCAACTGAAGCAGCT
CAAAGACATATTCATGCGTTTCGACATGGACTCGGACGGCAGCCTCACGC
AGCTGGAACTGGCCGCACTCCTGCGTGCCCTGGGGCTCAAGCCAACCGGC
GACCAGCTGCACATTTTGTTGGCCGACATGGATTCCAACGGCAACGGCCT
CGTCGAATTCAACGAATTGGTTGCTCTGATACTCCCCGACATCAGCGAGC
AAGTCTTGATCAACCAAAAACAACTCATGGAGGTCTTTCGGTCCTTCGAT
CGCGACGGCAACGGCCACATCACTGCGGCCGAGCTCGCGGGCTCCATGGC
CAAAATGGGCCACCCTTTGACGTACGGCGAGCTATCGGAAATGATGAGGG
AGGGCCAACCCAATGACAACGGACGCATAATCTTAGTGAGTCCGAACACA
TTATGAAAAAAGCTGATCCACAACTATACCGGCCTTAAGCTTAGGGGCGG
CCACCCGAGCACCCAAACAAAAAAAAAAAACAAACGCCCATGCGACGCAG
CTGCATGGGACACAGGACCGACCCCACTCAACCCGCGAGAACACCCAAAA
GAACCCGAGAGCGGACAAGAGCGCGCCAAGATTCAAGAAGGAGACAAGAA
CGTGACAAAAGCAGAGAAAGAGAGACAGCGGGCCGGGCGGGAACGGAGTA
CGCGAGAAAAGCCCAAACGGTCAAAAATAACACACGACACAGTAAAAAAG
ACACAACACGAAACGAACACAACGACCAAAGACGGCAGAG
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