EY684967

Overview
NameEY684967
Unique NameEY684967
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684967 vs. ExPASy Swiss-Prot
Match: CALM_TRYBB (Calmodulin OS=Trypanosoma brucei brucei PE=3 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 9.890e-16
Identity = 43/137 (31.39%), Postives = 76/137 (55.47%), Query Frame = 2
Query:  119 ETVQSEQLKQLKDIFMRFDMDSDGSXXXXXXXXXXXXXXXKPTGDQLHILLADMDSNGNGLVEFNELVALILPDISEQVLINQKQLMEVFRSFDRDGNGHITAAELAGSMAKMGHPLTYGELSEMMREGQPNDNGRI 529
            + + +EQ+ + K+ F  FD D DG+                PT  +L  ++ ++D +G+G ++F E + L+   + +    +++++ E FR FD+DGNG I+AAEL   M  +G  LT  E+ EM+RE   + +G+I
Sbjct:    3 DQLSNEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDQDGSGTIDFPEFLTLMARKMQDSD--SEEEIKEAFRVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADVDGDGQI 137          
BLAST of EY684967 vs. ExPASy Swiss-Prot
Match: CALM_ORYLA (Calmodulin-A (Fragment) OS=Oryzias latipes GN=calm1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.890e-16
Identity = 42/132 (31.82%), Postives = 75/132 (56.82%), Query Frame = 2
Query:  134 EQLKQLKDIFMRFDMDSDGSXXXXXXXXXXXXXXXKPTGDQLHILLADMDSNGNGLVEFNELVALILPDISEQVLINQKQLMEVFRSFDRDGNGHITAAELAGSMAKMGHPLTYGELSEMMREGQPNDNGRI 529
            EQ+ + K+ F  FD D DG+                PT  +L  ++ ++D++GNG ++F E + ++   + +    +++++ E FR FD+DGNG+I+AAEL   M  +G  LT  E+ EM+RE   + +G++
Sbjct:    1 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 130          
BLAST of EY684967 vs. ExPASy Swiss-Prot
Match: CALMF_NAEGR (Calmodulin, flagellar OS=Naegleria gruberi GN=CAM1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.890e-16
Identity = 42/132 (31.82%), Postives = 73/132 (55.30%), Query Frame = 2
Query:  134 EQLKQLKDIFMRFDMDSDGSXXXXXXXXXXXXXXXKPTGDQLHILLADMDSNGNGLVEFNELVALILPDISEQVLINQKQLMEVFRSFDRDGNGHITAAELAGSMAKMGHPLTYGELSEMMREGQPNDNGRI 529
            EQ+ + K+ F  FD D DG+                PT  +LH ++ ++D++GNG ++F E + ++   + +    N++++ E F+ FD+DGNG I+A EL   M  +G  LT  E+ EM+RE   + + +I
Sbjct:   14 EQIAEFKEAFSLFDKDGDGTITTSELGTVMRSLGQNPTEAELHDMINEVDADGNGTIDFTEFLTMMAKKMKDTD--NEEEIKEAFKVFDKDGNGFISAQELRHVMCNLGEKLTDEEVDEMIREADIDGDNQI 143          
BLAST of EY684967 vs. ExPASy Swiss-Prot
Match: CALM_PYTSP (Calmodulin OS=Pythium splendens PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.292e-15
Identity = 42/137 (30.66%), Postives = 77/137 (56.20%), Query Frame = 2
Query:  119 ETVQSEQLKQLKDIFMRFDMDSDGSXXXXXXXXXXXXXXXKPTGDQLHILLADMDSNGNGLVEFNELVALILPDISEQVLINQKQLMEVFRSFDRDGNGHITAAELAGSMAKMGHPLTYGELSEMMREGQPNDNGRI 529
            + +  EQ+ + K+ F  FD D DG+                PT  +L  ++ ++D++GNG ++F E + ++   + +    ++++++E F+ FD+DGNG I+AAEL   M  +G  LT  E+ EM+RE   + +G+I
Sbjct:    3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTD--SEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQI 137          
BLAST of EY684967 vs. ExPASy Swiss-Prot
Match: CALM_PHYIN (Calmodulin OS=Phytophthora infestans GN=CMD1 PE=3 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.292e-15
Identity = 42/137 (30.66%), Postives = 77/137 (56.20%), Query Frame = 2
Query:  119 ETVQSEQLKQLKDIFMRFDMDSDGSXXXXXXXXXXXXXXXKPTGDQLHILLADMDSNGNGLVEFNELVALILPDISEQVLINQKQLMEVFRSFDRDGNGHITAAELAGSMAKMGHPLTYGELSEMMREGQPNDNGRI 529
            + +  EQ+ + K+ F  FD D DG+                PT  +L  ++ ++D++GNG ++F E + ++   + +    ++++++E F+ FD+DGNG I+AAEL   M  +G  LT  E+ EM+RE   + +G+I
Sbjct:    3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTD--SEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQI 137          
BLAST of EY684967 vs. ExPASy Swiss-Prot
Match: CALM_CIOIN (Calmodulin OS=Ciona intestinalis PE=2 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 1.292e-15
Identity = 42/137 (30.66%), Postives = 76/137 (55.47%), Query Frame = 2
Query:  119 ETVQSEQLKQLKDIFMRFDMDSDGSXXXXXXXXXXXXXXXKPTGDQLHILLADMDSNGNGLVEFNELVALILPDISEQVLINQKQLMEVFRSFDRDGNGHITAAELAGSMAKMGHPLTYGELSEMMREGQPNDNGRI 529
            + +  EQ+ + K+ F  FD D DG+                PT  +L  ++ ++D++GNG ++F E + ++   + +    +++++ E FR FD+DGNG I+AAEL   M  +G  LT  E+ EM+RE   + +G++
Sbjct:    3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQV 137          
BLAST of EY684967 vs. ExPASy Swiss-Prot
Match: CALM_AGABI (Calmodulin OS=Agaricus bisporus PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.292e-15
Identity = 41/137 (29.93%), Postives = 77/137 (56.20%), Query Frame = 2
Query:  119 ETVQSEQLKQLKDIFMRFDMDSDGSXXXXXXXXXXXXXXXKPTGDQLHILLADMDSNGNGLVEFNELVALILPDISEQVLINQKQLMEVFRSFDRDGNGHITAAELAGSMAKMGHPLTYGELSEMMREGQPNDNGRI 529
            + +  EQ+ + K+ F  FD D DG+                P+  +L  ++ ++D++GNG ++F E + ++   + +    +++++ E F+ FD+DGNG+I+AAEL   M  +G  LT  E+ EM+RE   + +G+I
Sbjct:    3 DQLSEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPSQAELEDMINEVDADGNGTIDFPEFLTMMARKMRDTD--SEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDSEVDEMIREADVDGDGQI 137          
BLAST of EY684967 vs. ExPASy Swiss-Prot
Match: CALM_STRIE (Calmodulin OS=Strongylocentrotus intermedius PE=2 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 1.687e-15
Identity = 42/137 (30.66%), Postives = 76/137 (55.47%), Query Frame = 2
Query:  119 ETVQSEQLKQLKDIFMRFDMDSDGSXXXXXXXXXXXXXXXKPTGDQLHILLADMDSNGNGLVEFNELVALILPDISEQVLINQKQLMEVFRSFDRDGNGHITAAELAGSMAKMGHPLTYGELSEMMREGQPNDNGRI 529
            + +  EQ+ + K+ F  FD D DG+                PT  +L  ++ ++D++GNG ++F E + ++   + +    +++++ E FR FD+DGNG I+AAEL   M  +G  LT  E+ EM+RE   + +G++
Sbjct:   10 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 144          
BLAST of EY684967 vs. ExPASy Swiss-Prot
Match: CALM_METSE (Calmodulin OS=Metridium senile PE=1 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 1.687e-15
Identity = 42/137 (30.66%), Postives = 76/137 (55.47%), Query Frame = 2
Query:  119 ETVQSEQLKQLKDIFMRFDMDSDGSXXXXXXXXXXXXXXXKPTGDQLHILLADMDSNGNGLVEFNELVALILPDISEQVLINQKQLMEVFRSFDRDGNGHITAAELAGSMAKMGHPLTYGELSEMMREGQPNDNGRI 529
            + +  EQ+ + K+ F  FD D DG+                PT  +L  ++ ++D++GNG ++F E + ++   + +    +++++ E FR FD+DGNG I+AAEL   M  +G  LT  E+ EM+RE   + +G++
Sbjct:    3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 137          
BLAST of EY684967 vs. ExPASy Swiss-Prot
Match: CALM_MACPY (Calmodulin OS=Macrocystis pyrifera PE=2 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 1.687e-15
Identity = 42/137 (30.66%), Postives = 77/137 (56.20%), Query Frame = 2
Query:  119 ETVQSEQLKQLKDIFMRFDMDSDGSXXXXXXXXXXXXXXXKPTGDQLHILLADMDSNGNGLVEFNELVALILPDISEQVLINQKQLMEVFRSFDRDGNGHITAAELAGSMAKMGHPLTYGELSEMMREGQPNDNGRI 529
            + +  EQ+ + K+ F  FD D DG+                PT  +L  ++ ++D++GNG ++F E + ++   + +    ++++++E F+ FD+DGNG I+AAEL   M  +G  LT  E+ EM+RE   + +G+I
Sbjct:    3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTD--SEEEIIEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQI 137          
The following BLAST results are available for this feature:
BLAST of EY684967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
CALM_TRYBB9.890e-1631.39Calmodulin OS=Trypanosoma brucei brucei PE=3 SV=2[more]
CALM_ORYLA9.890e-1631.82Calmodulin-A (Fragment) OS=Oryzias latipes GN=calm... [more]
CALMF_NAEGR9.890e-1631.82Calmodulin, flagellar OS=Naegleria gruberi GN=CAM1... [more]
CALM_PYTSP1.292e-1530.66Calmodulin OS=Pythium splendens PE=2 SV=1[more]
CALM_PHYIN1.292e-1530.66Calmodulin OS=Phytophthora infestans GN=CMD1 PE=3 ... [more]
CALM_CIOIN1.292e-1530.66Calmodulin OS=Ciona intestinalis PE=2 SV=3[more]
CALM_AGABI1.292e-1529.93Calmodulin OS=Agaricus bisporus PE=1 SV=2[more]
CALM_STRIE1.687e-1530.66Calmodulin OS=Strongylocentrotus intermedius PE=2 ... [more]
CALM_METSE1.687e-1530.66Calmodulin OS=Metridium senile PE=1 SV=3[more]
CALM_MACPY1.687e-1530.66Calmodulin OS=Macrocystis pyrifera PE=2 SV=3[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-007-A03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684967 ID=EY684967; Name=EY684967; organism=Citrus sinensis; type=EST; length=890bp
AAAAAAAAGAACACAAAACACAACCTTTTTTTTTTTTTTCTTTTTCTTTT
TTTTTTCTTGAATCTTATTTTTCTTTCACCCCATTCCCATATATCTTTAA
TCAACAATGACGGTGATGGAAACAGTTCAATCGGAGCAACTGAAGCAGCT
CAAAGACATATTCATGCGTTTCGACATGGACTCGGACGGCAGCCTCACGC
AGCTGGAACTGGCCGCACTCCTGCGTGCCCTGGGGCTCAAGCCAACCGGC
GACCAGCTGCACATTTTGTTGGCCGACATGGATTCCAACGGCAACGGCCT
CGTCGAATTCAACGAATTGGTTGCTCTGATACTCCCCGACATCAGCGAGC
AAGTCTTGATCAACCAAAAACAACTCATGGAGGTCTTTCGGTCCTTCGAT
CGCGACGGCAACGGCCACATCACTGCGGCCGAGCTCGCGGGCTCCATGGC
CAAAATGGGCCACCCTTTGACGTACGGCGAGCTATCGGAAATGATGAGGG
AGGGCCAACCCAATGACAACGGACGCATAATCTTAGTGAGTCCGAACACA
TTATGAAAAAAGCTGATCCACAACTATACCGGCCTTAAGCTTAGGGGCGG
CCACCCGAGCACCCAAACAAAAAAAAAAAACAAACGCCCATGCGACGCAG
CTGCATGGGACACAGGACCGACCCCACTCAACCCGCGAGAACACCCAAAA
GAACCCGAGAGCGGACAAGAGCGCGCCAAGATTCAAGAAGGAGACAAGAA
CGTGACAAAAGCAGAGAAAGAGAGACAGCGGGCCGGGCGGGAACGGAGTA
CGCGAGAAAAGCCCAAACGGTCAAAAATAACACACGACACAGTAAAAAAG
ACACAACACGAAACGAACACAACGACCAAAGACGGCAGAG
back to top