EY684951

Overview
NameEY684951
Unique NameEY684951
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length929
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2A1_ORYSJ (Probable histone H2A.1 OS=Oryza sativa subsp. japonica GN=Os07g0545300 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 3.141e-36
Identity = 80/111 (72.07%), Postives = 84/111 (75.68%), Query Frame = 2
Query:  149 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMG 481
            A K+ SRS KAGLQFPVGRIARFLKAGKYAERVGAGAP                  GNAARDNKK RIVPRHIQLAVRNDEEL+KLLG  TIA+GGV+PNIHQ LL KK G
Sbjct:   13 AKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKAG 123          
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2A1_ORYSI (Probable histone H2A.1 OS=Oryza sativa subsp. indica GN=OsI_26380 PE=3 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 3.141e-36
Identity = 80/111 (72.07%), Postives = 84/111 (75.68%), Query Frame = 2
Query:  149 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMG 481
            A K+ SRS KAGLQFPVGRIARFLKAGKYAERVGAGAP                  GNAARDNKK RIVPRHIQLAVRNDEEL+KLLG  TIA+GGV+PNIHQ LL KK G
Sbjct:   13 AKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKAG 123          
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2A1_ARATH (Probable histone H2A.1 OS=Arabidopsis thaliana GN=At1g51060 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 3.141e-36
Identity = 80/111 (72.07%), Postives = 83/111 (74.77%), Query Frame = 2
Query:  149 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMG 481
            A K+ +RS KAGLQFPVGRIARFLK GKYAERVGAGAP                  GNAARDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH  LL KK G
Sbjct:   13 AKKATTRSSKAGLQFPVGRIARFLKKGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTG 123          
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2A2_ARATH (Probable histone H2A.2 OS=Arabidopsis thaliana GN=At3g20670 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 4.102e-36
Identity = 81/111 (72.97%), Postives = 82/111 (73.87%), Query Frame = 2
Query:  149 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMG 481
            A KS SRS KAGLQFPVGRIARFLK GKYA RVGAGAP                  GNAARDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH  LL KK G
Sbjct:   13 AKKSTSRSSKAGLQFPVGRIARFLKNGKYATRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHSLLLPKKAG 123          
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2A8_ORYSI (Probable histone H2A.8 OS=Oryza sativa subsp. indica GN=OsI_036919 PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 9.138e-36
Identity = 79/111 (71.17%), Postives = 83/111 (74.77%), Query Frame = 2
Query:  149 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMG 481
            A K+ SRS K GLQFPVGRIARFLKAGKYAERVGAGAP                  GNAARDNKK RIVPRHIQLAVRNDEEL+KLLG  TIA+GGV+PNIHQ LL KK G
Sbjct:   13 AKKATSRSSKGGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKAG 123          
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2A4_WHEAT (Histone H2A.4 OS=Triticum aestivum GN=TH254 PE=2 SV=3)

HSP 1 Score: 150.599 bits (379), Expect = 1.194e-35
Identity = 79/109 (72.48%), Postives = 83/109 (76.15%), Query Frame = 2
Query:  149 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKK 475
            A K+ SRS KAGLQFPVGRIARFLKAGKYAERVGAGAP                  GNAARDNKK RIVPRHIQLAVRNDEEL+KLLG  TIA+GGV+PNIHQ LL KK
Sbjct:   13 AKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKK 121          
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2A2_PICGU (Histone H2A.2 OS=Pichia guilliermondii GN=HTA2 PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 7.241e-33
Identity = 72/110 (65.45%), Postives = 80/110 (72.73%), Query Frame = 2
Query:  158 SVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGKG 487
            S SRS KAGL FPVGRI R L+ G YA+RVG+GAP                  GNAARDNKK+RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LL KK GKG
Sbjct:   14 STSRSAKAGLTFPVGRIHRLLRKGNYAQRVGSGAPVYLTSVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGDVTIAQGGVLPNIHQNLLPKKSGKG 123          
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2A1_CANAL (Histone H2A.1 OS=Candida albicans GN=HTA1 PE=3 SV=3)

HSP 1 Score: 140.584 bits (353), Expect = 1.235e-32
Identity = 70/110 (63.64%), Postives = 80/110 (72.73%), Query Frame = 2
Query:  158 SVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGKG 487
            S SRS KAGL FPVGR+ R L+ G YA+R+G+GAP                  GNAARDNKK+RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LL KK GKG
Sbjct:   15 STSRSAKAGLTFPVGRVHRLLRKGNYAQRIGSGAPVYLTSVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGDVTIAQGGVLPNIHQNLLPKKSGKG 124          
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2A_PLAFA (Histone H2A OS=Plasmodium falciparum PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 2.107e-32
Identity = 73/110 (66.36%), Postives = 78/110 (70.91%), Query Frame = 2
Query:  146 KASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKK 475
            KASK  S S KAGLQFPVGRI R+LK GKYA+RVGAGAP                  GNAARDNKK+RI PRHIQLAVRNDEEL+K L  VT A+GGVLPNIH  LL KK
Sbjct:   11 KASKGTSNSAKAGLQFPVGRIGRYLKKGKYAKRVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRITPRHIQLAVRNDEELNKFLAGVTFASGGVLPNIHNVLLPKK 120          
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2A_MAGGR (Histone H2A OS=Magnaporthe grisea GN=HTA1 PE=2 SV=3)

HSP 1 Score: 139.428 bits (350), Expect = 2.751e-32
Identity = 71/110 (64.55%), Postives = 78/110 (70.91%), Query Frame = 2
Query:  164 SRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGKGTG 493
            SRS KAGL FPVGR+ R L+ G YA+RVGAGAP                  GNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LL KK GK  G
Sbjct:   19 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTGKTAG 128          
The following BLAST results are available for this feature:
BLAST of EY684951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
H2A1_ORYSJ3.141e-3672.07Probable histone H2A.1 OS=Oryza sativa subsp. japo... [more]
H2A1_ORYSI3.141e-3672.07Probable histone H2A.1 OS=Oryza sativa subsp. indi... [more]
H2A1_ARATH3.141e-3672.07Probable histone H2A.1 OS=Arabidopsis thaliana GN=... [more]
H2A2_ARATH4.102e-3672.97Probable histone H2A.2 OS=Arabidopsis thaliana GN=... [more]
H2A8_ORYSI9.138e-3671.17Probable histone H2A.8 OS=Oryza sativa subsp. indi... [more]
H2A4_WHEAT1.194e-3572.48Histone H2A.4 OS=Triticum aestivum GN=TH254 PE=2 S... [more]
H2A2_PICGU7.241e-3365.45Histone H2A.2 OS=Pichia guilliermondii GN=HTA2 PE=... [more]
H2A1_CANAL1.235e-3263.64Histone H2A.1 OS=Candida albicans GN=HTA1 PE=3 SV=... [more]
H2A_PLAFA2.107e-3266.36Histone H2A OS=Plasmodium falciparum PE=2 SV=1[more]
H2A_MAGGR2.751e-3264.55Histone H2A OS=Magnaporthe grisea GN=HTA1 PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-005-F11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684951 ID=EY684951; Name=EY684951; organism=Citrus sinensis; type=EST; length=929bp
CCACGCGTCCGAAGCAATTTCACCGATCTTTTTTGTGGCTTCACTTTCAA
TCGCTTCAAACCAAACCGAAATCTAGGGTTAGGGTTTTTCTGTAATAAGA
ATGAGTTCAACTGGAGGGTCAACGAAGGGCGGCAGGGGTAAGCCGAAGGC
TTCGAAATCGGTCTCGCGGTCGCATAAGGCGGGCCTTCAGTTCCCGGTGG
GCAGGATCGCTAGGTTTTTGAAGGCCGGAAAGTACGCTGAGCGAGTCGGC
GCCGGAGCTCCTGTTTACCTCTCTGCCGTGCTTGAGTACCTCGCTGCTGA
GGTTCTGGAGCTTGCTGGCAATGCAGCAAGGGACAACAAGAAGAACCGTA
TAGTGCCAAGGCATATTCAGCTTGCAGTTCGAAATGATGAGGAATTGAGC
AAGCTGCTGGGGTCGGTTACCATTGCCAATGGAGGTGTTTTACCCAACAT
TCACCAGACGCTGCTTCACAAGAAGATGGGGAAAGGAACGGGTGAAATTG
GCTCTGCTTCTCCCAAATTCTACACTCTGCTCCTCCCGAATTATACTAGT
AGCCAGGAACCAAACACCCCCCCCAACCACACGCACGAACATTCAGCCCT
CACGAAAACCGGACATGGGCTTTGATCACCTTGAACGACGAAACAAGCAA
GGGAATAGCAGAACGATCACCCCAAGACGCACAAACCACAGACTACACGC
CAGGCCCGCCAGCGGCCTAAACGACGACCCCGCAACCAACACCGACGAGA
ACGACAGAGCTAGCAGTAACAAACGCAAAGACACAGACAAGGAAACGAAC
TGAAATAGGGCGAAGCAAAGCGACCAGAACAGAGCCTCAACTCAGGAAAT
GGGCCCGCACCCCCGCACGATTGTGGGCCTGCCCGAAGAACCCCCCCGCC
ACACAACTCACACACGACACGATAAAGCA
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