EY684951
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2AZ_ASPTN (Histone H2A.Z OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=HTZ1 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 5.213e-15 Identity = 54/115 (46.96%), Postives = 63/115 (54.78%), Query Frame = 2 Query: 164 SRSHKAGLQFPVGRIARFLKAGKYAE-RVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGKGTGEIGS 505 S S KAGLQFP G + RFLK + RVGA A GNAA+D K RI PRH+QLA+R DEEL L+ TIA GGVLP I++ LL K K G+ S Sbjct: 25 SHSAKAGLQFPRGSVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLI-RATIAFGGVLPRINRALLLKVEQKKKGKSDS 138
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2AZ_PHANO (Histone H2A.Z OS=Phaeosphaeria nodorum GN=HTZ1 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.809e-15 Identity = 52/111 (46.85%), Postives = 62/111 (55.86%), Query Frame = 2 Query: 164 SRSHKAGLQFPVGRIARFLKA-GKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGKGTG 493 S S KAGLQFP GRI R L+ + R+GA A GNAA+D K RI PRH+QLA+R DEEL L+ TIA GGVLP+I++ LL K K G Sbjct: 25 SHSAKAGLQFPCGRIKRHLRTITRQKTRIGAKASIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLI-RATIAFGGVLPHINRALLLKVEQKKKG 134
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2AX_DICDI (Histone H2A.x OS=Dictyostelium discoideum GN=H2AX PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 9.832e-14 Identity = 46/108 (42.59%), Postives = 57/108 (52.78%), Query Frame = 2 Query: 152 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKK 475 SK SRS +AG+ FPV R+ R L+ G++A RV + AP N +KK RI P+HI AV ND EL+ L VTIA GGVLP Q+ KK Sbjct: 32 SKPESRSARAGITFPVSRVDRLLREGRFAPRVESTAPVYLAAVLEYLVFEILELAHNTCSISKKTRITPQHINWAVGNDLELNSLFQHVTIAYGGVLPTPQQSTGEKK 139
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2A1_LEIIN (Histone H2A.1 OS=Leishmania infantum PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.879e-13 Identity = 47/122 (38.52%), Postives = 68/122 (55.74%), Query Frame = 2 Query: 155 KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGA-GAPXXXXXXXXXXXXXXXXXXGNAARDNKKN-RIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGKGTGEIGSASP 514 KS S+S K GL FPVGR+ ++ G+YA R+GA GA AA+ KK R+ PR + LA R+D+++ LL +VT+++ GV+PNI + + KK GK G A+P Sbjct: 13 KSGSKSAKCGLIFPVGRVGGMMRRGQYARRIGASGAVYLAAVLEYLTAELLELSVKAAAQSGKKRCRLNPRTVMLAARHDDDIGTLLKNVTLSHSGVVPNISKAMAKKKGGKK----GKATP 130
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2A_TRYCR (Histone H2A OS=Trypanosoma cruzi PE=3 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 1.087e-12 Identity = 45/113 (39.82%), Postives = 61/113 (53.98%), Query Frame = 2 Query: 146 KASKSVS--RSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKN--RIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHK 472 KASK S RS KAGL FPVGR+ L+ G+YA R+GA AA K R+ PR + LAVR+D++L LL VT++ GGV+P++++ L K Sbjct: 10 KASKKRSGGRSAKAGLIFPVGRVGSLLRRGQYARRIGASGAVYMAAVLEYLTAELLELSVKAASQQAKKPKRLTPRTVTLAVRHDDDLGMLLKDVTLSRGGVMPSLNKALAKK 122
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2A2_LILLO (Histone H2A.2 OS=Lilium longiflorum GN=gH2A PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.420e-12 Identity = 43/108 (39.81%), Postives = 55/108 (50.93%), Query Frame = 2 Query: 152 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKK 475 S+ RS KA LQF V R+ LK G+Y R+GA AP N +K+ I PRHI LAVRND E++KL VTI+ GV+P + L +K Sbjct: 13 SRRKLRSEKAALQFSVSRVEYSLKKGRYCRRLGATAPVYLAAVLENLVAEVLEMAANVTEKHKRIVIKPRHIMLAVRNDVEVNKLFHGVTISASGVVPKTRKELDRRK 120
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2A2_LEIIN (Histone H2A.2 OS=Leishmania infantum PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.854e-12 Identity = 43/114 (37.72%), Postives = 65/114 (57.02%), Query Frame = 2 Query: 149 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGA-GAPXXXXXXXXXXXXXXXXXXGNAARDNKKN-RIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGK 484 A KS S+S K GL FPVGR+ ++ G+YA R+GA GA AA+ KK R+ PR + LA R+D+++ LL +VT+++ GV+P++ + + KK GK Sbjct: 11 ARKSGSKSAKCGLIFPVGRVGGMMRRGQYARRIGASGAVYLAAVLEYLTAELLELSVKAAAQSGKKRCRLNPRTVMLAARHDDDIGTLLKNVTLSHSGVVPSVSKAVAKKKGGK 124
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2A_OLILU (Histone H2A (Fragment) OS=Olisthodiscus luteus PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.163e-12 Identity = 42/67 (62.69%), Postives = 47/67 (70.15%), Query Frame = 2 Query: 251 AGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNI 451 AGAP XXX X GNAARDNKK+RI+PRH+QLAV L+KLLG+VTIA GGVLPNI Sbjct: 1 AGAPVYLAAXXXYLTAEILXLAGNAARDNKKSRIIPRHVQLAVXXXXXLNKLLGNVTIAQGGVLPNI 67
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2AV1_DICDI (Histone H2A.v1 OS=Dictyostelium discoideum GN=H2Av1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.497e-11 Identity = 41/108 (37.96%), Postives = 54/108 (50.00%), Query Frame = 2 Query: 164 SRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGKG 487 SRS +A L FPV RI + ++ G++ +R + AP A K RI P+HI L++ D EL+ LL +VTIANGGV IH LL KG Sbjct: 132 SRSARADLTFPVSRIEKMIREGRFTKRCSSDAPVFLAAVLEYLTLEILELSITYANQKNKTRITPQHIHLSICCDAELNDLLKNVTIANGGVPKFIHPILLDTPKKKG 239 The following BLAST results are available for this feature:
BLAST of EY684951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684951 ID=EY684951; Name=EY684951; organism=Citrus sinensis; type=EST; length=929bpback to top |