EY684951

Overview
NameEY684951
Unique NameEY684951
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length929
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2AZ_ASPTN (Histone H2A.Z OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.213e-15
Identity = 54/115 (46.96%), Postives = 63/115 (54.78%), Query Frame = 2
Query:  164 SRSHKAGLQFPVGRIARFLKAGKYAE-RVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGKGTGEIGS 505
            S S KAGLQFP G + RFLK     + RVGA A                   GNAA+D K  RI PRH+QLA+R DEEL  L+   TIA GGVLP I++ LL K   K  G+  S
Sbjct:   25 SHSAKAGLQFPRGSVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLI-RATIAFGGVLPRINRALLLKVEQKKKGKSDS 138          
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2AZ_PHANO (Histone H2A.Z OS=Phaeosphaeria nodorum GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.809e-15
Identity = 52/111 (46.85%), Postives = 62/111 (55.86%), Query Frame = 2
Query:  164 SRSHKAGLQFPVGRIARFLKA-GKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGKGTG 493
            S S KAGLQFP GRI R L+   +   R+GA A                   GNAA+D K  RI PRH+QLA+R DEEL  L+   TIA GGVLP+I++ LL K   K  G
Sbjct:   25 SHSAKAGLQFPCGRIKRHLRTITRQKTRIGAKASIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLI-RATIAFGGVLPHINRALLLKVEQKKKG 134          
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2AX_DICDI (Histone H2A.x OS=Dictyostelium discoideum GN=H2AX PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.832e-14
Identity = 46/108 (42.59%), Postives = 57/108 (52.78%), Query Frame = 2
Query:  152 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKK 475
            SK  SRS +AG+ FPV R+ R L+ G++A RV + AP                   N    +KK RI P+HI  AV ND EL+ L   VTIA GGVLP   Q+   KK
Sbjct:   32 SKPESRSARAGITFPVSRVDRLLREGRFAPRVESTAPVYLAAVLEYLVFEILELAHNTCSISKKTRITPQHINWAVGNDLELNSLFQHVTIAYGGVLPTPQQSTGEKK 139          
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2A1_LEIIN (Histone H2A.1 OS=Leishmania infantum PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.879e-13
Identity = 47/122 (38.52%), Postives = 68/122 (55.74%), Query Frame = 2
Query:  155 KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGA-GAPXXXXXXXXXXXXXXXXXXGNAARDNKKN-RIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGKGTGEIGSASP 514
            KS S+S K GL FPVGR+   ++ G+YA R+GA GA                     AA+  KK  R+ PR + LA R+D+++  LL +VT+++ GV+PNI + +  KK GK     G A+P
Sbjct:   13 KSGSKSAKCGLIFPVGRVGGMMRRGQYARRIGASGAVYLAAVLEYLTAELLELSVKAAAQSGKKRCRLNPRTVMLAARHDDDIGTLLKNVTLSHSGVVPNISKAMAKKKGGKK----GKATP 130          
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2A_TRYCR (Histone H2A OS=Trypanosoma cruzi PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.087e-12
Identity = 45/113 (39.82%), Postives = 61/113 (53.98%), Query Frame = 2
Query:  146 KASKSVS--RSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKN--RIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHK 472
            KASK  S  RS KAGL FPVGR+   L+ G+YA R+GA                       AA    K   R+ PR + LAVR+D++L  LL  VT++ GGV+P++++ L  K
Sbjct:   10 KASKKRSGGRSAKAGLIFPVGRVGSLLRRGQYARRIGASGAVYMAAVLEYLTAELLELSVKAASQQAKKPKRLTPRTVTLAVRHDDDLGMLLKDVTLSRGGVMPSLNKALAKK 122          
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2A2_LILLO (Histone H2A.2 OS=Lilium longiflorum GN=gH2A PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.420e-12
Identity = 43/108 (39.81%), Postives = 55/108 (50.93%), Query Frame = 2
Query:  152 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKK 475
            S+   RS KA LQF V R+   LK G+Y  R+GA AP                   N    +K+  I PRHI LAVRND E++KL   VTI+  GV+P   + L  +K
Sbjct:   13 SRRKLRSEKAALQFSVSRVEYSLKKGRYCRRLGATAPVYLAAVLENLVAEVLEMAANVTEKHKRIVIKPRHIMLAVRNDVEVNKLFHGVTISASGVVPKTRKELDRRK 120          
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2A2_LEIIN (Histone H2A.2 OS=Leishmania infantum PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.854e-12
Identity = 43/114 (37.72%), Postives = 65/114 (57.02%), Query Frame = 2
Query:  149 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGA-GAPXXXXXXXXXXXXXXXXXXGNAARDNKKN-RIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGK 484
            A KS S+S K GL FPVGR+   ++ G+YA R+GA GA                     AA+  KK  R+ PR + LA R+D+++  LL +VT+++ GV+P++ + +  KK GK
Sbjct:   11 ARKSGSKSAKCGLIFPVGRVGGMMRRGQYARRIGASGAVYLAAVLEYLTAELLELSVKAAAQSGKKRCRLNPRTVMLAARHDDDIGTLLKNVTLSHSGVVPSVSKAVAKKKGGK 124          
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2A_OLILU (Histone H2A (Fragment) OS=Olisthodiscus luteus PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.163e-12
Identity = 42/67 (62.69%), Postives = 47/67 (70.15%), Query Frame = 2
Query:  251 AGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNI 451
            AGAP     XXX       X  GNAARDNKK+RI+PRH+QLAV     L+KLLG+VTIA GGVLPNI
Sbjct:    1 AGAPVYLAAXXXYLTAEILXLAGNAARDNKKSRIIPRHVQLAVXXXXXLNKLLGNVTIAQGGVLPNI 67          
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2AV1_DICDI (Histone H2A.v1 OS=Dictyostelium discoideum GN=H2Av1 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.497e-11
Identity = 41/108 (37.96%), Postives = 54/108 (50.00%), Query Frame = 2
Query:  164 SRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGKG 487
            SRS +A L FPV RI + ++ G++ +R  + AP                     A    K RI P+HI L++  D EL+ LL +VTIANGGV   IH  LL     KG
Sbjct:  132 SRSARADLTFPVSRIEKMIREGRFTKRCSSDAPVFLAAVLEYLTLEILELSITYANQKNKTRITPQHIHLSICCDAELNDLLKNVTIANGGVPKFIHPILLDTPKKKG 239          
The following BLAST results are available for this feature:
BLAST of EY684951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
H2AZ_ASPTN5.213e-1546.96Histone H2A.Z OS=Aspergillus terreus (strain NIH 2... [more]
H2AZ_PHANO6.809e-1546.85Histone H2A.Z OS=Phaeosphaeria nodorum GN=HTZ1 PE=... [more]
H2AX_DICDI9.832e-1442.59Histone H2A.x OS=Dictyostelium discoideum GN=H2AX ... [more]
H2A1_LEIIN4.879e-1338.52Histone H2A.1 OS=Leishmania infantum PE=2 SV=1[more]
H2A_TRYCR1.087e-1239.82Histone H2A OS=Trypanosoma cruzi PE=3 SV=2[more]
H2A2_LILLO1.420e-1239.81Histone H2A.2 OS=Lilium longiflorum GN=gH2A PE=1 S... [more]
H2A2_LEIIN1.854e-1237.72Histone H2A.2 OS=Leishmania infantum PE=2 SV=1[more]
H2A_OLILU3.163e-1262.69Histone H2A (Fragment) OS=Olisthodiscus luteus PE=... [more]
H2AV1_DICDI3.497e-1137.96Histone H2A.v1 OS=Dictyostelium discoideum GN=H2Av... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-005-F11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684951 ID=EY684951; Name=EY684951; organism=Citrus sinensis; type=EST; length=929bp
CCACGCGTCCGAAGCAATTTCACCGATCTTTTTTGTGGCTTCACTTTCAA
TCGCTTCAAACCAAACCGAAATCTAGGGTTAGGGTTTTTCTGTAATAAGA
ATGAGTTCAACTGGAGGGTCAACGAAGGGCGGCAGGGGTAAGCCGAAGGC
TTCGAAATCGGTCTCGCGGTCGCATAAGGCGGGCCTTCAGTTCCCGGTGG
GCAGGATCGCTAGGTTTTTGAAGGCCGGAAAGTACGCTGAGCGAGTCGGC
GCCGGAGCTCCTGTTTACCTCTCTGCCGTGCTTGAGTACCTCGCTGCTGA
GGTTCTGGAGCTTGCTGGCAATGCAGCAAGGGACAACAAGAAGAACCGTA
TAGTGCCAAGGCATATTCAGCTTGCAGTTCGAAATGATGAGGAATTGAGC
AAGCTGCTGGGGTCGGTTACCATTGCCAATGGAGGTGTTTTACCCAACAT
TCACCAGACGCTGCTTCACAAGAAGATGGGGAAAGGAACGGGTGAAATTG
GCTCTGCTTCTCCCAAATTCTACACTCTGCTCCTCCCGAATTATACTAGT
AGCCAGGAACCAAACACCCCCCCCAACCACACGCACGAACATTCAGCCCT
CACGAAAACCGGACATGGGCTTTGATCACCTTGAACGACGAAACAAGCAA
GGGAATAGCAGAACGATCACCCCAAGACGCACAAACCACAGACTACACGC
CAGGCCCGCCAGCGGCCTAAACGACGACCCCGCAACCAACACCGACGAGA
ACGACAGAGCTAGCAGTAACAAACGCAAAGACACAGACAAGGAAACGAAC
TGAAATAGGGCGAAGCAAAGCGACCAGAACAGAGCCTCAACTCAGGAAAT
GGGCCCGCACCCCCGCACGATTGTGGGCCTGCCCGAAGAACCCCCCCGCC
ACACAACTCACACACGACACGATAAAGCA
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