EY684951

Overview
NameEY684951
Unique NameEY684951
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length929
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2A7_ARATH (Probable histone H2A.7 OS=Arabidopsis thaliana GN=At5g59870 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.851e-31
Identity = 72/122 (59.02%), Postives = 84/122 (68.85%), Query Frame = 2
Query:  152 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMG-KGTGEIGSASP 514
            +KSVS+S KAGLQFPVGRI RFLK G+YA+R+G GAP                  GNAARDNKK+RI+PRH+ LA+RNDEEL KLL  VTIA+GGVLPNI+  LL KK   K   E  + SP
Sbjct:   22 TKSVSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVYMAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLPKKSATKPAEEKATKSP 143          
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2A3_MEDTR (Probable histone H2A.3 OS=Medicago truncatula PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.851e-31
Identity = 72/121 (59.50%), Postives = 82/121 (67.77%), Query Frame = 2
Query:  155 KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGKGTGEIGSASPK 517
            KSV+RS +AGLQFPVGRI R+LK G+YA+RVG GAP                  GNAARDNKKNRI+PRH+ LAVRNDEEL KLL  VTIA+GGVLPNI+  LL KK  +     G   PK
Sbjct:   23 KSVTRSIRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPILLPKKTER--ANTGGKEPK 141          
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2A2_MEDTR (Probable histone H2A.2 OS=Medicago truncatula GN=MtrDRAFT_AC149210g4v1 PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.851e-31
Identity = 69/107 (64.49%), Postives = 78/107 (72.90%), Query Frame = 2
Query:  155 KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKK 475
            KSV+RS +AGLQFPVGRI R+LK G+YA+RVG GAP                  GNAARDNKKNRI+PRH+ LAVRNDEEL KLL  VTIA+GGVLPNI+  LL KK
Sbjct:   22 KSVTRSIRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKK 128          
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2A2_CANGA (Histone H2A.2 OS=Candida glabrata GN=HTA2 PE=3 SV=3)

HSP 1 Score: 134.42 bits (337), Expect = 8.851e-31
Identity = 67/112 (59.82%), Postives = 80/112 (71.43%), Query Frame = 2
Query:  149 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGK 484
            A  S +RS KAGL FPVGR+ R L+ G YA+R+G+GAP                  GNAARDNKK+RI+PRH+QLA+RND+EL+KLLG+VTIA GGVLPNIHQ LL KK  K
Sbjct:   13 AKASQTRSAKAGLTFPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSAK 124          
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2A1_CANGA (Histone H2A.1 OS=Candida glabrata GN=HTA1 PE=3 SV=3)

HSP 1 Score: 134.42 bits (337), Expect = 8.851e-31
Identity = 67/112 (59.82%), Postives = 80/112 (71.43%), Query Frame = 2
Query:  149 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGK 484
            A  S +RS KAGL FPVGR+ R L+ G YA+R+G+GAP                  GNAARDNKK+RI+PRH+QLA+RND+EL+KLLG+VTIA GGVLPNIHQ LL KK  K
Sbjct:   13 AKASQTRSAKAGLTFPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSAK 124          
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2A_STRPU (Histone H2A, embryonic OS=Strongylocentrotus purpuratus PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 1.156e-30
Identity = 68/113 (60.18%), Postives = 80/113 (70.80%), Query Frame = 2
Query:  152 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGKGT 490
            +K+ +RS +AGLQFPVGR+ RFL+ G YA+RVG GAP                  GNAARDNKK+RI+PRH+QLAVRNDEEL+KLLG VTIA GGVLPNI   LL KK  K +
Sbjct:   12 TKAKTRSSRAGLQFPVGRVHRFLRKGNYAKRVGGGAPVYMAAVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTAKSS 124          
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2AL_STRPU (Late histone H2A.L3 OS=Strongylocentrotus purpuratus PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 1.156e-30
Identity = 69/113 (61.06%), Postives = 79/113 (69.91%), Query Frame = 2
Query:  152 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGKGT 490
            +K+ SRS +AGLQFPVGR+ RFL+ G YA+RVGAGAP                  GNAARDNKK RI+PRH+QLAVRNDEEL+KLL  VTIA GGVLPNI   LL KK  K +
Sbjct:   13 AKAKSRSARAGLQFPVGRVHRFLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTSKAS 125          
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2AE_PSAMI (Histone H2A, embryonic OS=Psammechinus miliaris PE=3 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 1.156e-30
Identity = 68/113 (60.18%), Postives = 80/113 (70.80%), Query Frame = 2
Query:  152 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGKGT 490
            +K+ +RS +AGLQFPVGR+ RFL+ G YA+RVG GAP                  GNAARDNKK+RI+PRH+QLAVRNDEEL+KLLG VTIA GGVLPNI   LL KK  K +
Sbjct:   12 TKAKTRSSRAGLQFPVGRVHRFLRKGNYAKRVGGGAPVYMAAVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTAKSS 124          
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2A2_PICST (Histone H2A.2 OS=Pichia stipitis GN=HTA2 PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.156e-30
Identity = 68/109 (62.39%), Postives = 78/109 (71.56%), Query Frame = 2
Query:  158 SVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGK 484
            S SRS KAGL FPVGR+ R L+ G YA+RVG+GAP                  GNAARDNKK+RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ+LL  K  K
Sbjct:   15 STSRSAKAGLTFPVGRVHRLLRKGNYAQRVGSGAPVYLTSVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQSLLPAKKAK 123          
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2A2_DEBHA (Histone H2A.2 OS=Debaryomyces hansenii GN=HTA2 PE=3 SV=3)

HSP 1 Score: 134.035 bits (336), Expect = 1.156e-30
Identity = 68/109 (62.39%), Postives = 78/109 (71.56%), Query Frame = 2
Query:  158 SVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGK 484
            S SRS KAGL FPVGR+ R L+ G YA+RVG+GAP                  GNAARDNKK+RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ+LL  K  K
Sbjct:   15 STSRSAKAGLTFPVGRVHRLLRKGNYAQRVGSGAPVYLTSVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQSLLPAKKAK 123          
The following BLAST results are available for this feature:
BLAST of EY684951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
H2A7_ARATH8.851e-3159.02Probable histone H2A.7 OS=Arabidopsis thaliana GN=... [more]
H2A3_MEDTR8.851e-3159.50Probable histone H2A.3 OS=Medicago truncatula PE=3... [more]
H2A2_MEDTR8.851e-3164.49Probable histone H2A.2 OS=Medicago truncatula GN=M... [more]
H2A2_CANGA8.851e-3159.82Histone H2A.2 OS=Candida glabrata GN=HTA2 PE=3 SV=... [more]
H2A1_CANGA8.851e-3159.82Histone H2A.1 OS=Candida glabrata GN=HTA1 PE=3 SV=... [more]
H2A_STRPU1.156e-3060.18Histone H2A, embryonic OS=Strongylocentrotus purpu... [more]
H2AL_STRPU1.156e-3061.06Late histone H2A.L3 OS=Strongylocentrotus purpurat... [more]
H2AE_PSAMI1.156e-3060.18Histone H2A, embryonic OS=Psammechinus miliaris PE... [more]
H2A2_PICST1.156e-3062.39Histone H2A.2 OS=Pichia stipitis GN=HTA2 PE=3 SV=1[more]
H2A2_DEBHA1.156e-3062.39Histone H2A.2 OS=Debaryomyces hansenii GN=HTA2 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-005-F11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684951 ID=EY684951; Name=EY684951; organism=Citrus sinensis; type=EST; length=929bp
CCACGCGTCCGAAGCAATTTCACCGATCTTTTTTGTGGCTTCACTTTCAA
TCGCTTCAAACCAAACCGAAATCTAGGGTTAGGGTTTTTCTGTAATAAGA
ATGAGTTCAACTGGAGGGTCAACGAAGGGCGGCAGGGGTAAGCCGAAGGC
TTCGAAATCGGTCTCGCGGTCGCATAAGGCGGGCCTTCAGTTCCCGGTGG
GCAGGATCGCTAGGTTTTTGAAGGCCGGAAAGTACGCTGAGCGAGTCGGC
GCCGGAGCTCCTGTTTACCTCTCTGCCGTGCTTGAGTACCTCGCTGCTGA
GGTTCTGGAGCTTGCTGGCAATGCAGCAAGGGACAACAAGAAGAACCGTA
TAGTGCCAAGGCATATTCAGCTTGCAGTTCGAAATGATGAGGAATTGAGC
AAGCTGCTGGGGTCGGTTACCATTGCCAATGGAGGTGTTTTACCCAACAT
TCACCAGACGCTGCTTCACAAGAAGATGGGGAAAGGAACGGGTGAAATTG
GCTCTGCTTCTCCCAAATTCTACACTCTGCTCCTCCCGAATTATACTAGT
AGCCAGGAACCAAACACCCCCCCCAACCACACGCACGAACATTCAGCCCT
CACGAAAACCGGACATGGGCTTTGATCACCTTGAACGACGAAACAAGCAA
GGGAATAGCAGAACGATCACCCCAAGACGCACAAACCACAGACTACACGC
CAGGCCCGCCAGCGGCCTAAACGACGACCCCGCAACCAACACCGACGAGA
ACGACAGAGCTAGCAGTAACAAACGCAAAGACACAGACAAGGAAACGAAC
TGAAATAGGGCGAAGCAAAGCGACCAGAACAGAGCCTCAACTCAGGAAAT
GGGCCCGCACCCCCGCACGATTGTGGGCCTGCCCGAAGAACCCCCCCGCC
ACACAACTCACACACGACACGATAAAGCA
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