EY684928

Overview
NameEY684928
Unique NameEY684928
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684928 vs. ExPASy Swiss-Prot
Match: AATC_CHICK (Aspartate aminotransferase, cytoplasmic OS=Gallus gallus GN=GOT1 PE=1 SV=3)

HSP 1 Score: 161.77 bits (408), Expect = 4.630e-39
Identity = 95/221 (42.99%), Postives = 129/221 (58.37%), Query Frame = 2
Query:  134 SVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTDEGKPLVLNVLRKAEQLLMNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH-----QLTIYIPQPTWGNHPKVFTLAGL-SVKTYRYYDPATPGLNFPRACWRIFRLHHPELKL-LPHAWALNPTGVTHPLSNGNTISHFIRLKGLMTFFD 775
            S+F  + RAP   +  +T  + +D    K+NLGVGAYRTDEG+P VL V+RK EQL+  D S   EYLPI+GL +F   ++++ LG DSPAI   RV +VQ L GTG+LR+GAEFL R Y+        +Y+  PTW NH  VF  AG   ++TYRY+D A  GL+       + +   PE  + + HA A NPTG          I+  ++ + L  FFD
Sbjct:    4 SIFAAVPRAPPVAVFKLTADFREDGDSRKVNLGVGAYRTDEGQPWVLPVVRKVEQLIAGDGSLNHEYLPILGLPEFRANASRIALGDDSPAIAQKRVGSVQGLGGTGALRIGAEFLRRWYNGNNNTATPVYVSSPTWENHNSVFMDAGFKDIRTYRYWDAAKRGLDLQGLLDDMEKA--PEFSIFILHACAHNPTGTDPTPDEWKQIAAVMKRRCLFPFFD 222          
BLAST of EY684928 vs. ExPASy Swiss-Prot
Match: AATC_MOUSE (Aspartate aminotransferase, cytoplasmic OS=Mus musculus GN=Got1 PE=1 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 7.898e-39
Identity = 94/225 (41.78%), Postives = 131/225 (58.22%), Query Frame = 2
Query:  122 MDSESVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTDEGKPLVLNVLRKAEQLLMNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH-----QLTIYIPQPTWGNHPKVFTLAGL-SVKTYRYYDPATPGLNFPRACWRIFRLHHPELKL-LPHAWALNPTGVTHPLSNGNTISHFIRLKGLMTFFD 775
            M   SVF ++ +AP   +  +T  +  D  P K+NLGVGAYRTDE +P VL V+RK EQ + ND S   EYLPI+GL +F   +++L+LG +SPAI++NRV  VQ L GTG+LR+GA+FL R Y+        IY+  PTW NH  VF+ AG   ++ Y Y+D    GL+       +   + PE  + + HA A NPTG          I+  ++ + L  FFD
Sbjct:    1 MAPPSVFAQVPQAPPVLVFKLTADFRDDPDPRKVNLGVGAYRTDESQPWVLPVVRKVEQKIANDNSLNHEYLPILGLAEFRSCASRLVLGDNSPAIRENRVGGVQSLGGTGALRIGADFLGRWYNGTDNKNTPIYVSSPTWENHNAVFSAAGFKDIRPYCYWDAEKRGLDLQGFLNDL--ENAPEFSIFVLHACAHNPTGTDPTPEQWKQIAAVMQRRFLFPFFD 223          
BLAST of EY684928 vs. ExPASy Swiss-Prot
Match: AATC_PANTR (Aspartate aminotransferase, cytoplasmic OS=Pan troglodytes GN=GOT1 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.760e-38
Identity = 92/225 (40.89%), Postives = 132/225 (58.67%), Query Frame = 2
Query:  122 MDSESVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTDEGKPLVLNVLRKAEQLLMNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH-----QLTIYIPQPTWGNHPKVFTLAGL-SVKTYRYYDPATPGLNFPRACWRIFRLHHPELKLLP-HAWALNPTGVTHPLSNGNTISHFIRLKGLMTFFD 775
            M   SVF ++ +A    +  +T  + +D  P K+NLGVGAYRTD+  P VL V++K EQ + ND S   EYLPI+GL +F   +++L LG DSPA+K+ RV  VQ L GTG+LR+GA+FLAR Y+        +Y+  PTW NH  VF+ AG   +++YRY+D    GL+       +   + PE  ++  HA A NPTG+         I+  ++ + L  FFD
Sbjct:    1 MAPPSVFAEVPQAQPVLVFKLTADFREDPDPRKVNLGVGAYRTDDCHPWVLPVVKKVEQKIANDNSLNHEYLPILGLAEFRSCASRLALGDDSPALKEKRVGGVQSLGGTGALRIGADFLARWYNGTNNKNTPVYVSSPTWENHNAVFSAAGFKDIRSYRYWDAEKRGLDLQGFLNDL--ENAPEFSIVVLHACAHNPTGIDPTPEQWKQIASVMKHRFLFPFFD 223          
BLAST of EY684928 vs. ExPASy Swiss-Prot
Match: AATC_HUMAN (Aspartate aminotransferase, cytoplasmic OS=Homo sapiens GN=GOT1 PE=1 SV=3)

HSP 1 Score: 159.844 bits (403), Expect = 1.760e-38
Identity = 92/225 (40.89%), Postives = 132/225 (58.67%), Query Frame = 2
Query:  122 MDSESVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTDEGKPLVLNVLRKAEQLLMNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH-----QLTIYIPQPTWGNHPKVFTLAGL-SVKTYRYYDPATPGLNFPRACWRIFRLHHPELKLLP-HAWALNPTGVTHPLSNGNTISHFIRLKGLMTFFD 775
            M   SVF ++ +A    +  +T  + +D  P K+NLGVGAYRTD+  P VL V++K EQ + ND S   EYLPI+GL +F   +++L LG DSPA+K+ RV  VQ L GTG+LR+GA+FLAR Y+        +Y+  PTW NH  VF+ AG   +++YRY+D    GL+       +   + PE  ++  HA A NPTG+         I+  ++ + L  FFD
Sbjct:    1 MAPPSVFAEVPQAQPVLVFKLTADFREDPDPRKVNLGVGAYRTDDCHPWVLPVVKKVEQKIANDNSLNHEYLPILGLAEFRSCASRLALGDDSPALKEKRVGGVQSLGGTGALRIGADFLARWYNGTNNKNTPVYVSSPTWENHNAVFSAAGFKDIRSYRYWDAEKRGLDLQGFLNDL--ENAPEFSIVVLHACAHNPTGIDPTPEQWKQIASVMKHRFLFPFFD 223          
BLAST of EY684928 vs. ExPASy Swiss-Prot
Match: AATC_PONAB (Aspartate aminotransferase, cytoplasmic OS=Pongo abelii GN=GOT1 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 3.001e-38
Identity = 92/225 (40.89%), Postives = 131/225 (58.22%), Query Frame = 2
Query:  122 MDSESVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTDEGKPLVLNVLRKAEQLLMNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH-----QLTIYIPQPTWGNHPKVFTLAGL-SVKTYRYYDPATPGLNFPRACWRIFRLHHPELKLLP-HAWALNPTGVTHPLSNGNTISHFIRLKGLMTFFD 775
            M   SVF ++ +A    +  +T  + +D  P K+NLGVGAYRTD+  P VL V++K EQ + ND S   EYLPI+GL +F   +++L LG DSPA+K+ RV  VQ L GTG+LR+GA+FLAR Y+        +Y+  PTW NH  VF+ AG   +++YRY+D    GL+       +   + PE  ++  HA A NPTG          I+  ++ + L  FFD
Sbjct:    1 MAPPSVFAEVPQAQPVLVFKLTADFREDPDPRKVNLGVGAYRTDDCHPWVLPVVKKVEQKIANDNSLNHEYLPILGLAEFRSCASRLALGDDSPALKEKRVGGVQSLGGTGALRIGADFLARWYNGTNNKNTPVYVSSPTWENHNAVFSAAGFKDIRSYRYWDAEKRGLDLQGLLNDL--ENAPEFSIVVLHACAHNPTGTDPTPEQWKQIASVMKHRFLFPFFD 223          
BLAST of EY684928 vs. ExPASy Swiss-Prot
Match: AATC_PIG (Aspartate aminotransferase, cytoplasmic OS=Sus scrofa GN=GOT1 PE=1 SV=3)

HSP 1 Score: 159.073 bits (401), Expect = 3.001e-38
Identity = 93/225 (41.33%), Postives = 131/225 (58.22%), Query Frame = 2
Query:  122 MDSESVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTDEGKPLVLNVLRKAEQLLMNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH-----QLTIYIPQPTWGNHPKVFTLAGL-SVKTYRYYDPATPGLNFPRACWRIFRLHHPELKL-LPHAWALNPTGVTHPLSNGNTISHFIRLKGLMTFFD 775
            M   SVF ++ +A    +  +   + +D  P K+NLGVGAYRTD+ +P VL V+RK EQ + ND S   EYLPI+GL +F   +++L LG DSPA+++ RV  VQ L GTG+LR+GAEFLAR Y+        +Y+  PTW NH  VFT AG   +++YRY+D    GL+       +   + PE  + + HA A NPTG          I+  ++ + L  FFD
Sbjct:    1 MAPPSVFAEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANDSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDL--ENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFD 223          
BLAST of EY684928 vs. ExPASy Swiss-Prot
Match: AATC_MACFA (Aspartate aminotransferase, cytoplasmic OS=Macaca fascicularis GN=GOT1 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 3.001e-38
Identity = 92/225 (40.89%), Postives = 131/225 (58.22%), Query Frame = 2
Query:  122 MDSESVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTDEGKPLVLNVLRKAEQLLMNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH-----QLTIYIPQPTWGNHPKVFTLAGL-SVKTYRYYDPATPGLNFPRACWRIFRLHHPELKLLP-HAWALNPTGVTHPLSNGNTISHFIRLKGLMTFFD 775
            M   SVF ++ +A    +  +T  + +D  P K+NLGVGAYRTD+  P VL V++K EQ + ND S   EYLPI+GL +F   +++L LG DSPA+K+ RV  VQ L GTG+LR+GA+FLAR Y+        +Y+  PTW NH  VF+ AG   +++YRY+D    GL+       +   + PE  ++  HA A NPTG          I+  ++ + L  FFD
Sbjct:    1 MAPPSVFSEVPQAQPVLVFKLTADFREDPDPRKVNLGVGAYRTDDCHPWVLPVVKKVEQKIANDNSLNHEYLPILGLAEFRSCASRLALGDDSPALKEKRVGGVQSLGGTGALRIGADFLARWYNGTNNKNTPVYVSSPTWENHNAVFSAAGFKDIRSYRYWDAEKRGLDLQGFLNDL--ENAPEFSIIVLHACAHNPTGTDPTPEQWKQIASVMKHRFLFPFFD 223          
BLAST of EY684928 vs. ExPASy Swiss-Prot
Match: AATC_RAT (Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus GN=Got1 PE=1 SV=3)

HSP 1 Score: 157.918 bits (398), Expect = 6.686e-38
Identity = 90/225 (40.00%), Postives = 131/225 (58.22%), Query Frame = 2
Query:  122 MDSESVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTDEGKPLVLNVLRKAEQLLMNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH-----QLTIYIPQPTWGNHPKVFTLAGL-SVKTYRYYDPATPGLNFPRACWRIFRLHHPELKL-LPHAWALNPTGVTHPLSNGNTISHFIRLKGLMTFFD 775
            M   S F ++ +AP   +  +   +  D  P K+NLGVGAYRTD+ +P VL V+RK EQ + ND S   EYLPI+GL +F   +++L+LG +SPA+++NRV  VQ L GTG+LR+GA+FL R Y+        +Y+  PTW NH  VF+ AG   +++YRY+D    GL+       +   + PE  + + HA A NPTG          I+  ++ + L  FFD
Sbjct:    1 MAPPSFFAQVPQAPPVLVFKLIADFRDDPDPRKVNLGVGAYRTDDSQPWVLPVVRKVEQKIANDHSLNHEYLPILGLAEFRSCASQLVLGDNSPALRENRVGGVQSLGGTGALRIGADFLGRWYNGTDNKNTPVYVSSPTWENHNGVFSAAGFKDIRSYRYWDAEKRGLDLQGFLNDL--ENAPEFSIFVLHACAHNPTGTDPTEEEWKQIAAVMKRRFLFPFFD 223          
BLAST of EY684928 vs. ExPASy Swiss-Prot
Match: AATM_SCHPO (Aspartate aminotransferase, mitochondrial OS=Schizosaccharomyces pombe GN=aat1 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.141e-37
Identity = 89/189 (47.09%), Postives = 113/189 (59.79%), Query Frame = 2
Query:  137 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTDEGKPLVLNVLRKAEQLLMNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATPGLNFPRACWRIFRLHHPELKLLPHAWALNPTGV 703
            V+  +   P DPI G+T AY KD    K+NLG G YR D GKP VL  +R+AE  L++ Q   KEY PI G+  F   + KL  G    +IKD R+ + Q +SGTG+L + A FLA  Y   TIY+  PTWGNH  VF+ AGL+VK+Y+YYDPAT GL+       +       + LL HA A NPTGV
Sbjct:   39 VWADVPMGPPDPIFGITEAYKKDGDVKKMNLGAGTYRDDAGKPYVLPSVRQAETELLS-QKLDKEYAPITGIPSFRVQATKLAYGDVYESIKD-RLVSAQSISGTGALCIAANFLASFYPSKTIYVSDPTWGNHKNVFSRAGLTVKSYKYYDPATRGLDIKGMLSDLTSAPDGSIILL-HACAHNPTGV 224          
BLAST of EY684928 vs. ExPASy Swiss-Prot
Match: AATC_CAEEL (Probable aspartate aminotransferase, cytoplasmic OS=Caenorhabditis elegans GN=T01C8.5 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.541e-37
Identity = 89/215 (41.40%), Postives = 123/215 (57.21%), Query Frame = 2
Query:  134 SVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTDEGKPLVLNVLRKAEQLLMNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGL-SVKTYRYYDPATPGLNFPRACWRIFRLHHPELKLLPHAWALNPTGVTHPLSNGNTISHFIRLKGLMTFFD 775
            S F  I  AP   +      Y  +T+PVK+NL +GAYRT+EG+P VL V+ + E  + ND S   EYLP++G   F K + +L+LGA+SPAIK+ R   VQCLSGTG+LR GAEFLA   +  T+Y+  PTWGNH  VF  AG  +V  Y ++D     ++  +    +       + +L H  A NPTG+         ++  I+ K L TFFD
Sbjct:    2 SFFDGIPVAPPIEVFHKNKMYLDETAPVKVNLTIGAYRTEEGQPWVLPVVHETEVEIANDTSLNHEYLPVLGHEGFRKAATELVLGAESPAIKEERSFGVQCLSGTGALRAGAEFLASVCNMKTVYVSNPTWGNHKLVFKKAGFTTVADYTFWDYDNKRVHIEKFLSDLESAPEKSVIIL-HGCAHNPTGMDPTQEQWKLVAEVIKRKNLFTFFD 215          
The following BLAST results are available for this feature:
BLAST of EY684928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
AATC_CHICK4.630e-3942.99Aspartate aminotransferase, cytoplasmic OS=Gallus ... [more]
AATC_MOUSE7.898e-3941.78Aspartate aminotransferase, cytoplasmic OS=Mus mus... [more]
AATC_PANTR1.760e-3840.89Aspartate aminotransferase, cytoplasmic OS=Pan tro... [more]
AATC_HUMAN1.760e-3840.89Aspartate aminotransferase, cytoplasmic OS=Homo sa... [more]
AATC_PONAB3.001e-3840.89Aspartate aminotransferase, cytoplasmic OS=Pongo a... [more]
AATC_PIG3.001e-3841.33Aspartate aminotransferase, cytoplasmic OS=Sus scr... [more]
AATC_MACFA3.001e-3840.89Aspartate aminotransferase, cytoplasmic OS=Macaca ... [more]
AATC_RAT6.686e-3840.00Aspartate aminotransferase, cytoplasmic OS=Rattus ... [more]
AATM_SCHPO1.141e-3747.09Aspartate aminotransferase, mitochondrial OS=Schiz... [more]
AATC_CAEEL2.541e-3741.40Probable aspartate aminotransferase, cytoplasmic O... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-005-D07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684928 ID=EY684928; Name=EY684928; organism=Citrus sinensis; type=EST; length=864bp
CCACGCGTCCGCCCACGCGTCCGCCGACGCCAATACTATATTAAACCCAA
ACATAATTTTCTCTTCACATTTTTTTCCCCCACAAACTCTCTCATTTCAT
TGATTTCTTGAAAGAAATTTAATGGATTCTGAATCAGTGTTTGGAAAGAT
TGTTCGTGCTCCTGAAGATCCCATTCTAGGGGTCACTGTTGCTTATAACA
AGGATACAAGCCCAGTCAAGTTGAACTTGGGTGTTGGAGCTTACCGAACT
GATGAAGGGAAACCTCTGGTGCTGAATGTATTGAGAAAGGCAGAGCAGCT
CTTAATGAATGACCAGTCACGGGTCAAAGAGTATCTTCCCATTGTTGGAC
TTGTGGATTTTAATAAATTGAGTGCAAAGCTCATCCTTGGTGCTGACAGC
CCTGCGATTAAAGACAACAGAGTGACCACCGTTCAGTGCTTGTCTGGCAC
TGGTTCTTTGAGGGTTGGAGCTGAGTTTCTGGCAAGGCATTATCACCAAC
TTACCATATATATTCCACAGCCAACATGGGGAAACCATCCCAAAGTTTTC
ACTTTAGCAGGATTGTCTGTGAAGACCTACCGCTATTATGATCCAGCAAC
ACCTGGGCTAAACTTCCCAAGGGCTTGCTGGAGGATCTTTAGGCTGCACC
ATCCGGAGCTAAAGCTCCTTCCTCATGCTTGGGCTCTTAATCCAACGGGT
GTAACCCACCCCTTGAGCAATGGGAACACAATCAGCCACTTTATAAGGCT
AAAAGGTTTGATGACTTTCTTTGACCACGGCTTAACAAGGAATTGCAGAA
CGGAACCCAGGAAGGAAAACAGCAGACACACAGCGACCAAAACTGCCAAC
ATAGAGCCCAAAAG
back to top