EY684912

Overview
NameEY684912
Unique NameEY684912
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684912 vs. ExPASy Swiss-Prot
Match: LIMD2_BOVIN (LIM domain-containing protein 2 OS=Bos taurus GN=LIMD2 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.155e-14
Identity = 30/70 (42.86%), Postives = 45/70 (64.29%), Query Frame = 1
Query:  202 QQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTGSLEKSF 411
            ++ C AC KTVY +++L AD  ++H +CF C HC   L L ++ +  G  YC+PHF QLFK  G+ ++ F
Sbjct:   38 KETCAACQKTVYPMERLVADKLIFHSSCFCCKHCHTKLSLGSYAALHGEFYCKPHFQQLFKSKGNYDEGF 107          
BLAST of EY684912 vs. ExPASy Swiss-Prot
Match: CSRP2_HUMAN (Cysteine and glycine-rich protein 2 OS=Homo sapiens GN=CSRP2 PE=1 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 7.087e-14
Identity = 41/147 (27.89%), Postives = 69/147 (46.94%), Query Frame = 1
Query:  187 PFGGTQQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTGSLEKSFEGT------------PKIVKPEKLVENENAQKVSNKFVGTRDKCVGCDRTVYPTDKVSVNGAAYHRSCFKCS 591
            P  G   KC AC +TVY  +++  D R +H+ CF C  C+  L  +     +  +YC+  + + +   G       GT            P+ V+P +   N N  K + K+ G  +KC  C  +VY  +K+   G  +H++CF+C+
Sbjct:    2 PVWGGGNKCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIHDEEIYCKSCYGKKYGPKGYGYGQGAGTLNMDRGERLGIKPESVQPHRPTTNPNTSKFAQKY-GGAEKCSRCGDSVYAAEKIIGAGKPWHKNCFRCA 147          
BLAST of EY684912 vs. ExPASy Swiss-Prot
Match: CSRP2_BOVIN (Cysteine and glycine-rich protein 2 OS=Bos taurus GN=CSRP2 PE=2 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 7.087e-14
Identity = 41/147 (27.89%), Postives = 69/147 (46.94%), Query Frame = 1
Query:  187 PFGGTQQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTGSLEKSFEGT------------PKIVKPEKLVENENAQKVSNKFVGTRDKCVGCDRTVYPTDKVSVNGAAYHRSCFKCS 591
            P  G   KC AC +TVY  +++  D R +H+ CF C  C+  L  +     +  +YC+  + + +   G       GT            P+ V+P +   N N  K + K+ G  +KC  C  +VY  +K+   G  +H++CF+C+
Sbjct:    2 PVWGGGNKCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIHDEEIYCKSCYGKKYGPKGYGYGQGAGTLNMDRGERLGIKPESVQPHRPTTNPNTSKFAQKY-GGAEKCSRCGDSVYAAEKIIGAGKPWHKNCFRCA 147          
BLAST of EY684912 vs. ExPASy Swiss-Prot
Match: CSRP2_RAT (Cysteine and glycine-rich protein 2 OS=Rattus norvegicus GN=Csrp2 PE=2 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 1.209e-13
Identity = 40/147 (27.21%), Postives = 68/147 (46.26%), Query Frame = 1
Query:  187 PFGGTQQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTGSLEKSFEGT------------PKIVKPEKLVENENAQKVSNKFVGTRDKCVGCDRTVYPTDKVSVNGAAYHRSCFKCS 591
            P  G   KC AC +TVY  +++  D R +H+ CF C  C+  L  +     +  +YC+  + + +   G       GT            P+  +P +   N N  K + K+ G  +KC  C  +VY  +K+   G  +H++CF+C+
Sbjct:    2 PVWGGGNKCGACGRTVYHAEEVQCDGRTFHRCCFLCMVCRKNLDSTTVAIHDEEIYCKSCYGKKYGPKGYGYGQGAGTLNMDRGERLGIKPESAQPHRPTTNPNTSKFAQKY-GGAEKCSRCGDSVYAAEKIIGAGKPWHKNCFRCA 147          
BLAST of EY684912 vs. ExPASy Swiss-Prot
Match: CSRP2_MOUSE (Cysteine and glycine-rich protein 2 OS=Mus musculus GN=Csrp2 PE=2 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 2.062e-13
Identity = 40/147 (27.21%), Postives = 68/147 (46.26%), Query Frame = 1
Query:  187 PFGGTQQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTGSLEKSFEGT------------PKIVKPEKLVENENAQKVSNKFVGTRDKCVGCDRTVYPTDKVSVNGAAYHRSCFKCS 591
            P  G   KC AC +TVY  +++  D R +H+ CF C  C+  L  +     +  +YC+  + + +   G       GT            P+  +P +   N N  K + K+ G  +KC  C  +VY  +K+   G  +H++CF+C+
Sbjct:    2 PVWGGGNKCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIHDEEIYCKSCYGKKYGPKGYGYGQGAGTLNMDRGERLGIKPESAQPHRPTTNPNTSKFAQKY-GGAEKCSRCGDSVYAAEKIIGAGKPWHKNCFRCA 147          
BLAST of EY684912 vs. ExPASy Swiss-Prot
Match: CSRP1_RAT (Cysteine and glycine-rich protein 1 OS=Rattus norvegicus GN=Csrp1 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 2.062e-13
Identity = 43/147 (29.25%), Postives = 68/147 (46.26%), Query Frame = 1
Query:  187 PFGGTQQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTGSLEKSFEGTPKIVKPEKL------------VENENAQKVSNKFVGTRDKCVGCDRTVYPTDKVSVNGAAYHRSCFKCS 591
            P  G  +KC  C KTVY  +++  +   +HK+CF C  CK  L  +        +YC+  + + +   G       GT  + K E L              N NA K + K +G  ++C  C + VY  +KV   G ++H+SCF+C+
Sbjct:    2 PNWGGGKKCGVCQKTVYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVAVHGEEIYCKSCYGKKYGPKGYGYGQGAGTLSMDKGESLGIKHEEAPGHRPTTNPNASKFAQK-IGGSERCPRCSQAVYAAEKVIGAGKSWHKSCFRCA 147          
BLAST of EY684912 vs. ExPASy Swiss-Prot
Match: CSRP1_MOUSE (Cysteine and glycine-rich protein 1 OS=Mus musculus GN=Csrp1 PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 3.517e-13
Identity = 43/147 (29.25%), Postives = 67/147 (45.58%), Query Frame = 1
Query:  187 PFGGTQQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTGSLEKSFEGTPKIVKPEKL------------VENENAQKVSNKFVGTRDKCVGCDRTVYPTDKVSVNGAAYHRSCFKCS 591
            P  G  +KC  C KTVY  +++  +   +HK+CF C  CK  L  +        +YC+  + + +   G       GT    K E L              N NA K + K +G  ++C  C + VY  +KV   G ++H+SCF+C+
Sbjct:    2 PNWGGGKKCGVCQKTVYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVAVHGEEIYCKSCYGKKYGPKGYGYGQGAGTLSTDKGESLGIKHEEAPGHRPTTNPNASKFAQK-IGGSERCPRCSQAVYAAEKVIGAGKSWHKSCFRCA 147          
BLAST of EY684912 vs. ExPASy Swiss-Prot
Match: CSRP3_BOVIN (Cysteine and glycine-rich protein 3 OS=Bos taurus GN=CSRP3 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.594e-13
Identity = 43/151 (28.48%), Postives = 71/151 (47.02%), Query Frame = 1
Query:  187 PFGGTQQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTG----------------SLEKSFEGTPKIVKPEKLVENENAQKVSNKFVGTRDKCVGCDRTVYPTDKVSVNGAAYHRSCFKCS 591
            P  G   KC AC+KTVY  +++  + R +HK CF C  C+  L  +   + E  +YC+  + + +   G                 L   F+ +PK  +      + N  K + KF G  +KC  C ++VY  +KV   G  +H++CF+C+
Sbjct:    2 PNWGGGAKCGACEKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCYGRRYGPKGIGYGQGAGCLSTDTGEHLGLQFQQSPK--QARSATTSSNPSKFA-KF-GESEKCPRCGKSVYAAEKVMGGGKPWHKTCFRCA 148          
BLAST of EY684912 vs. ExPASy Swiss-Prot
Match: CSRP2_COTJA (Cysteine and glycine-rich protein 2 OS=Coturnix coturnix japonica GN=CSRP2 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 7.836e-13
Identity = 43/148 (29.05%), Postives = 69/148 (46.62%), Query Frame = 1
Query:  187 PFGGTQQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTGSLEKSFEGTPKI-------VKPE------KLVENENAQKVSNKFVGTRDKCVGCDRTVYPTDKVSVNGAAYHRSCFKCS 591
            P  G   KC AC +TVY  +++  D R +H+ CF C  C+  L  +     +  +YC+  + + +   G       GT  +       +KPE      +   N N  K + KF G  +KC  C  +VY  +KV   G  +H++CF+C+
Sbjct:    2 PNWGGGNKCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIHDAEVYCKSCYGKKYGPKGYGYGQGAGTLNMDRGERLGIKPESSPSPHRPTTNPNTSKFAQKF-GGAEKCSRCGDSVYAAEKVIGAGKPWHKNCFRCA 148          
BLAST of EY684912 vs. ExPASy Swiss-Prot
Match: CSRP2_CHICK (Cysteine and glycine-rich protein 2 OS=Gallus gallus GN=CSRP2 PE=2 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 7.836e-13
Identity = 43/148 (29.05%), Postives = 69/148 (46.62%), Query Frame = 1
Query:  187 PFGGTQQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTGSLEKSFEGTPKI-------VKPE------KLVENENAQKVSNKFVGTRDKCVGCDRTVYPTDKVSVNGAAYHRSCFKCS 591
            P  G   KC AC +TVY  +++  D R +H+ CF C  C+  L  +     +  +YC+  + + +   G       GT  +       +KPE      +   N N  K + KF G  +KC  C  +VY  +KV   G  +H++CF+C+
Sbjct:    2 PNWGGGNKCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIHDAEVYCKSCYGKKYGPKGYGYGQGAGTLNMDRGERLGIKPESTPSPHRPTTNPNTSKFAQKF-GGAEKCSRCGDSVYAAEKVIGAGKPWHKNCFRCA 148          
The following BLAST results are available for this feature:
BLAST of EY684912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
LIMD2_BOVIN4.155e-1442.86LIM domain-containing protein 2 OS=Bos taurus GN=L... [more]
CSRP2_HUMAN7.087e-1427.89Cysteine and glycine-rich protein 2 OS=Homo sapien... [more]
CSRP2_BOVIN7.087e-1427.89Cysteine and glycine-rich protein 2 OS=Bos taurus ... [more]
CSRP2_RAT1.209e-1327.21Cysteine and glycine-rich protein 2 OS=Rattus norv... [more]
CSRP2_MOUSE2.062e-1327.21Cysteine and glycine-rich protein 2 OS=Mus musculu... [more]
CSRP1_RAT2.062e-1329.25Cysteine and glycine-rich protein 1 OS=Rattus norv... [more]
CSRP1_MOUSE3.517e-1329.25Cysteine and glycine-rich protein 1 OS=Mus musculu... [more]
CSRP3_BOVIN4.594e-1328.48Cysteine and glycine-rich protein 3 OS=Bos taurus ... [more]
CSRP2_COTJA7.836e-1329.05Cysteine and glycine-rich protein 2 OS=Coturnix co... [more]
CSRP2_CHICK7.836e-1329.05Cysteine and glycine-rich protein 2 OS=Gallus gall... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-005-C01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684912 ID=EY684912; Name=EY684912; organism=Citrus sinensis; type=EST; length=890bp
CCACGCGTCCGTTTTCCTCACATTTTGGTTTCTTTTTTTCTCCTCATTAT
CATCAATAAAACACAAAAAAGAAGAAGGCGCTGGAATCAAGAAAAAAAAT
CACGAAGTTGCTTCTCTTAATACAATAAATCTGAGGTTCGGTTGGACCGG
AAGCTAGCTAGCTAGCAAGCAGCAGCCATGGCATCACCCTTTGGAGGAAC
CCAACAAAAATGCATGGCCTGTGACAAAACTGTGTACCTTGTTGACAAGT
TGACGGCCGATAATCGGGTCTATCACAAAGCTTGCTTCCGGTGCCACCAT
TGCAAAGGAACCCTCAAGCTCAGTAACTTCAATTCCTTTGAGGGGGTCCT
GTATTGCAGGCCTCACTTTGATCAGCTCTTCAAGAGAACTGGCAGCCTGG
AGAAGAGTTTTGAAGGAACACCAAAGATTGTGAAACCTGAAAAGCTCGTT
GAAAATGAGAATGCACAGAAAGTCTCCAACAAGTTTGTGGGCACCAGAGA
TAAATGTGTGGGATGCGATAGGACTGTTTATCCCACTGACAAGGTTTCTG
TAAATGGCGCCGCATATCATAGGAGCTGCTTCAAGTGCAGCCATGGAAGT
TGAACAACGACCCATCAAAATATATTGGCCATGAGGGGAAAGTCTAATGC
AGGAATCGTACGCATACAAATCGTTCGGGAAAAAGGCAACTAACACAAGT
GGCGACCAACTTGAAAAAAATCGAATGTCCACAAAACAAACTCCGGTACA
CATGAGGCCGAAACTAACATCCAAAGGAGACTTGCCCCATAAGACAACGC
ACGAGCCGCCCGCCGCACAACCAACATCAACCGCGGCGGGACCAGCCCAG
CCGAGAGAGACGACCACCAACGAGACACATGGGAACAAAC
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