EY684912

Overview
NameEY684912
Unique NameEY684912
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684912 vs. ExPASy Swiss-Prot
Match: CSRP1_PONAB (Cysteine and glycine-rich protein 1 OS=Pongo abelii GN=CSRP1 PE=2 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 7.836e-13
Identity = 42/147 (28.57%), Postives = 67/147 (45.58%), Query Frame = 1
Query:  187 PFGGTQQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTGSLEKSFEGTPKIVKPEKL------------VENENAQKVSNKFVGTRDKCVGCDRTVYPTDKVSVNGAAYHRSCFKCS 591
            P  G  +KC  C KTVY  +++  +   +HK+CF C  CK  L  +        +YC+  + + +   G       GT    K E L              N NA K + K +G  ++C  C + VY  +KV   G ++H++CF+C+
Sbjct:    2 PNWGGGKKCGVCQKTVYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVAVHGEEIYCKSCYGKKYGPKGYGYGQGAGTLSTDKGESLGIKHEESPGHRPTTNPNASKFAQK-IGGSERCPRCSQAVYAAEKVIGAGKSWHKACFRCA 147          
BLAST of EY684912 vs. ExPASy Swiss-Prot
Match: CSRP1_HUMAN (Cysteine and glycine-rich protein 1 OS=Homo sapiens GN=CSRP1 PE=1 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 7.836e-13
Identity = 42/147 (28.57%), Postives = 67/147 (45.58%), Query Frame = 1
Query:  187 PFGGTQQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTGSLEKSFEGTPKIVKPEKL------------VENENAQKVSNKFVGTRDKCVGCDRTVYPTDKVSVNGAAYHRSCFKCS 591
            P  G  +KC  C KTVY  +++  +   +HK+CF C  CK  L  +        +YC+  + + +   G       GT    K E L              N NA K + K +G  ++C  C + VY  +KV   G ++H++CF+C+
Sbjct:    2 PNWGGGKKCGVCQKTVYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVAVHGEEIYCKSCYGKKYGPKGYGYGQGAGTLSTDKGESLGIKHEEAPGHRPTTNPNASKFAQK-IGGSERCPRCSQAVYAAEKVIGAGKSWHKACFRCA 147          
BLAST of EY684912 vs. ExPASy Swiss-Prot
Match: CSRP1_BOVIN (Cysteine and glycine-rich protein 1 OS=Bos taurus GN=CSRP1 PE=2 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 7.836e-13
Identity = 43/147 (29.25%), Postives = 67/147 (45.58%), Query Frame = 1
Query:  187 PFGGTQQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTGSLEKSFEGTPKIVKPEKL------------VENENAQKVSNKFVGTRDKCVGCDRTVYPTDKVSVNGAAYHRSCFKCS 591
            P  G  +KC  C KTVY  +++  +   +HK+CF C  CK  L  +        +YC+  + + +   G       GT  + K E L              N N  K + K VG  ++C  C + VY  +KV   G ++H+SCF+C+
Sbjct:    2 PNWGGGKKCGVCQKTVYFAEEVQCEGSSFHKSCFLCLVCKKNLDSTTVAVHGEEIYCKSCYGKKYGPKGYGYGQGAGTLSMDKGESLGIRHEEAPGHRPTTNPNTSKFAQK-VGGSERCPRCSQAVYAAEKVIGAGKSWHKSCFRCA 147          
BLAST of EY684912 vs. ExPASy Swiss-Prot
Match: CSRP1_COTJA (Cysteine and glycine-rich protein 1 OS=Coturnix coturnix japonica GN=CSRP1 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.978e-12
Identity = 43/146 (29.45%), Postives = 66/146 (45.21%), Query Frame = 1
Query:  187 PFGGTQQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTGSLEKSFEGTPKIVKPEKL-----------VENENAQKVSNKFVGTRDKCVGCDRTVYPTDKVSVNGAAYHRSCFKCS 591
            P  G  +KC  C K VY  +++  +   +HK+CF C  CK  L  +        +YC+  + + +   G       GT    K E L             N NA +++ K VG  D C  C + VY  +KV   G ++H+SCF+C+
Sbjct:    2 PNWGGGKKCGVCQKAVYFAEEVQCEGSSFHKSCFLCMVCKKNLDSTTVAVHGDEIYCKSCYGKKYGPKGYGYGMGAGTLSTDKGESLGIKYEEGQSHRPTNPNASRMAQK-VGGSDGCPRCGQAVYAAEKVIGAGKSWHKSCFRCA 146          
BLAST of EY684912 vs. ExPASy Swiss-Prot
Match: CSRP1_CHICK (Cysteine and glycine-rich protein 1 OS=Gallus gallus GN=CSRP1 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.978e-12
Identity = 43/146 (29.45%), Postives = 66/146 (45.21%), Query Frame = 1
Query:  187 PFGGTQQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTGSLEKSFEGTPKIVKPEKL-----------VENENAQKVSNKFVGTRDKCVGCDRTVYPTDKVSVNGAAYHRSCFKCS 591
            P  G  +KC  C K VY  +++  +   +HK+CF C  CK  L  +        +YC+  + + +   G       GT    K E L             N NA +++ K VG  D C  C + VY  +KV   G ++H+SCF+C+
Sbjct:    2 PNWGGGKKCGVCQKAVYFAEEVQCEGSSFHKSCFLCMVCKKNLDSTTVAVHGDEIYCKSCYGKKYGPKGYGYGMGAGTLSTDKGESLGIKYEEGQSHRPTNPNASRMAQK-VGGSDGCPRCGQAVYAAEKVIGAGKSWHKSCFRCA 146          
BLAST of EY684912 vs. ExPASy Swiss-Prot
Match: CRIP2_BOVIN (Cysteine-rich protein 2 OS=Bos taurus GN=CRIP2 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.930e-11
Identity = 46/158 (29.11%), Postives = 67/158 (42.41%), Query Frame = 1
Query:  208 KCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYC-RPHFDQLFKRTG---------SLEKSFEGTPKIVKP-EKLVENENAQKVS------------NKFVGTRDKCVGCDRTVYPTDKVSVNGAAYHRSCFKCSHGS*TTT 612
            KC  CDKTVY  +K+++  + +H+ C RC HC  TL        +G  +C +P +  LF   G           EK     P++  P E  V     +K S              F G  + C  C++ VY  +KV+  G  +HR C +C     T T
Sbjct:    4 KCPKCDKTVYFAEKVSSLGKDWHRFCLRCEHCSKTLTPGGHAEHDGKPFCHKPCYATLFGPKGVNIGGAGSYIYEKPSAEKPQVTGPIEVPVARTEERKASGPPKGPSKASSVTTFTGEPNMCPRCNKRVYFAEKVTSLGKDWHRPCLRCERCGKTLT 161          
BLAST of EY684912 vs. ExPASy Swiss-Prot
Match: LIMC_DICDI (LIM domain-containing protein C OS=Dictyostelium discoideum GN=limC PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.334e-11
Identity = 37/137 (27.01%), Postives = 61/137 (44.53%), Query Frame = 1
Query:  211 CMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRT-----GSLEKSFEGTPKIVKPEKLVEN------ENAQKVSNKFVGTRDKCVGCDRTVYPTDKVSVNGAAYHRSCFKC 588
            C  C K VY  + + A  + YHK C +C HC   L+L  ++  +G  YC+  +D+LF++      G +  SFE  PK+     +            ++V  +   T   C  C +  Y  +    N   +H++CF C
Sbjct:    5 CPTCTKRVYAAEAVKACEKQYHKLCLQCFHCHKILQLGQYSERDGQPYCKTDYDRLFRQAGYRGGGVVADSFEPAPKVETTTPVEPTPPPTFLTPTEEVKVQLFPT--NCPKCGKKAYFNELKVYNSRDWHKTCFAC 139          
BLAST of EY684912 vs. ExPASy Swiss-Prot
Match: CRIP2_MOUSE (Cysteine-rich protein 2 OS=Mus musculus GN=Crip2 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.334e-11
Identity = 46/158 (29.11%), Postives = 67/158 (42.41%), Query Frame = 1
Query:  208 KCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYC-RPHFDQLFKRTG---------SLEKSFEGTPKIVKP-EKLVENENAQKVS------------NKFVGTRDKCVGCDRTVYPTDKVSVNGAAYHRSCFKCSHGS*TTT 612
            KC  CDKTVY  +K+++  + +HK C +C  C  TL        +G  +C +P +  LF   G           EK     P++  P E  V     +K S              F G  + C  C++ VY  +KV+  G  +HR C +C   S T T
Sbjct:    4 KCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCNKTLTPGGHAEHDGKPFCHKPCYATLFGPKGVNIGGAGSYIYEKPQTEAPQVTGPIEVPVVRTEERKTSGPPKGPSKASSVTTFTGEPNMCPRCNKRVYFAEKVTSLGKDWHRPCLRCERCSKTLT 161          
BLAST of EY684912 vs. ExPASy Swiss-Prot
Match: CRIP2_RAT (Cysteine-rich protein 2 OS=Rattus norvegicus GN=Crip2 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.579e-11
Identity = 46/158 (29.11%), Postives = 67/158 (42.41%), Query Frame = 1
Query:  208 KCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYC-RPHFDQLFKRTG---------SLEKSFEGTPKIVKP-EKLVENENAQKVS------------NKFVGTRDKCVGCDRTVYPTDKVSVNGAAYHRSCFKCSHGS*TTT 612
            KC  CDKTVY  +K+++  + +HK C +C  C  TL        +G  +C +P +  LF   G           EK     P++  P E  V     +K S              F G  + C  C++ VY  +KV+  G  +HR C +C   S T T
Sbjct:    4 KCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCNKTLTPGGHAEHDGKPFCHKPCYATLFGPKGVNIGGAGSYIYEKPPTEAPQVTGPIEVPVVRTEERKTSGPPKGPSKASSVTTFTGEPNMCPRCNKRVYFAEKVTSLGKDWHRPCLRCERCSKTLT 161          
The following BLAST results are available for this feature:
BLAST of EY684912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
CSRP1_PONAB7.836e-1328.57Cysteine and glycine-rich protein 1 OS=Pongo abeli... [more]
CSRP1_HUMAN7.836e-1328.57Cysteine and glycine-rich protein 1 OS=Homo sapien... [more]
CSRP1_BOVIN7.836e-1329.25Cysteine and glycine-rich protein 1 OS=Bos taurus ... [more]
CSRP1_COTJA2.978e-1229.45Cysteine and glycine-rich protein 1 OS=Coturnix co... [more]
CSRP1_CHICK2.978e-1229.45Cysteine and glycine-rich protein 1 OS=Gallus gall... [more]
CRIP2_BOVIN1.930e-1129.11Cysteine-rich protein 2 OS=Bos taurus GN=CRIP2 PE=... [more]
LIMC_DICDI7.334e-1127.01LIM domain-containing protein C OS=Dictyostelium d... [more]
CRIP2_MOUSE7.334e-1129.11Cysteine-rich protein 2 OS=Mus musculus GN=Crip2 P... [more]
CRIP2_RAT9.579e-1129.11Cysteine-rich protein 2 OS=Rattus norvegicus GN=Cr... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-005-C01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684912 ID=EY684912; Name=EY684912; organism=Citrus sinensis; type=EST; length=890bp
CCACGCGTCCGTTTTCCTCACATTTTGGTTTCTTTTTTTCTCCTCATTAT
CATCAATAAAACACAAAAAAGAAGAAGGCGCTGGAATCAAGAAAAAAAAT
CACGAAGTTGCTTCTCTTAATACAATAAATCTGAGGTTCGGTTGGACCGG
AAGCTAGCTAGCTAGCAAGCAGCAGCCATGGCATCACCCTTTGGAGGAAC
CCAACAAAAATGCATGGCCTGTGACAAAACTGTGTACCTTGTTGACAAGT
TGACGGCCGATAATCGGGTCTATCACAAAGCTTGCTTCCGGTGCCACCAT
TGCAAAGGAACCCTCAAGCTCAGTAACTTCAATTCCTTTGAGGGGGTCCT
GTATTGCAGGCCTCACTTTGATCAGCTCTTCAAGAGAACTGGCAGCCTGG
AGAAGAGTTTTGAAGGAACACCAAAGATTGTGAAACCTGAAAAGCTCGTT
GAAAATGAGAATGCACAGAAAGTCTCCAACAAGTTTGTGGGCACCAGAGA
TAAATGTGTGGGATGCGATAGGACTGTTTATCCCACTGACAAGGTTTCTG
TAAATGGCGCCGCATATCATAGGAGCTGCTTCAAGTGCAGCCATGGAAGT
TGAACAACGACCCATCAAAATATATTGGCCATGAGGGGAAAGTCTAATGC
AGGAATCGTACGCATACAAATCGTTCGGGAAAAAGGCAACTAACACAAGT
GGCGACCAACTTGAAAAAAATCGAATGTCCACAAAACAAACTCCGGTACA
CATGAGGCCGAAACTAACATCCAAAGGAGACTTGCCCCATAAGACAACGC
ACGAGCCGCCCGCCGCACAACCAACATCAACCGCGGCGGGACCAGCCCAG
CCGAGAGAGACGACCACCAACGAGACACATGGGAACAAAC
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