EY684888
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684888 vs. ExPASy Swiss-Prot
Match: RBS3B_SOLLC (Ribulose bisphosphate carboxylase small chain 3B, chloroplastic OS=Solanum lycopersicum GN=RBCS-3B PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 6.321e-32 Identity = 61/104 (58.65%), Postives = 78/104 (75.00%), Query Frame = 2 Query: 164 RPTMTLLPFASNGVRFQCVKVWPPTGLKKFETLSYLPPLSDETLLREINYLLRSGWIPCLEFQLEKGWVYREHHKTPRYYNGRYWTK*KMTMFGRHKPTQVLKD 475 + + + ASNG R C++VWPP +KK+ETLSYLP LSDE LL EI YLL++GW+PCLEF+ E G+VYRE+HK+P YY+GRYWT K+ MFG TQVL + Sbjct: 40 KQNLDITSIASNGGRVSCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAE 143
BLAST of EY684888 vs. ExPASy Swiss-Prot
Match: RBS3A_SOLLC (Ribulose bisphosphate carboxylase small chain 3A/3C, chloroplastic OS=Solanum lycopersicum GN=RBCS-3A/3C PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 6.321e-32 Identity = 61/104 (58.65%), Postives = 78/104 (75.00%), Query Frame = 2 Query: 164 RPTMTLLPFASNGVRFQCVKVWPPTGLKKFETLSYLPPLSDETLLREINYLLRSGWIPCLEFQLEKGWVYREHHKTPRYYNGRYWTK*KMTMFGRHKPTQVLKD 475 + + + ASNG R C++VWPP +KK+ETLSYLP LSDE LL EI YLL++GW+PCLEF+ E G+VYRE+HK+P YY+GRYWT K+ MFG TQVL + Sbjct: 40 KQNLDITSIASNGGRVSCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAE 143
BLAST of EY684888 vs. ExPASy Swiss-Prot
Match: RBS1_SOLTU (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Solanum tuberosum GN=RBCS-1 PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 6.321e-32 Identity = 59/104 (56.73%), Postives = 80/104 (76.92%), Query Frame = 2 Query: 164 RPTMTLLPFASNGVRFQCVKVWPPTGLKKFETLSYLPPLSDETLLREINYLLRSGWIPCLEFQLEKGWVYREHHKTPRYYNGRYWTK*KMTMFGRHKPTQVLKD 475 + + + ASNG R +C++VWPP +KK+ETLSYLP L+DE LL+E+ YLL++GW+PCLEF+ E G+VYRE+HK+P YY+GRYWT K+ MFG TQVL + Sbjct: 41 KQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAE 144
BLAST of EY684888 vs. ExPASy Swiss-Prot
Match: RBS_MUSAC (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Musa acuminata GN=RBCS1 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.137e-31 Identity = 67/133 (50.38%), Postives = 85/133 (63.91%), Query Frame = 2 Query: 164 RPTMTLLPFASNGVRFQCVKVWPPTGLKKFETLSYLPPLSDETLLREINYLLRSGWIPCLEFQLEKGWVYREHHKTPRYYNGRYWTK*KMTMFGRHKPTQVLKDDAGGPERNIHIFSTELSDFTTTRPVQRIT 562 +P L SNG R QC+KVWP G+KKFETLSYLP + DE L+++I YLLRS WIPCLEF KG+V+RE+H++P YY+GRYWT K+ MFG QV K+ + H F + F R VQ I+ Sbjct: 41 KPNADLSHLPSNGGRVQCMKVWPIEGVKKFETLSYLPTMKDEALVKQIEYLLRSKWIPCLEF-CPKGFVWRENHRSPGYYDGRYWTMWKLPMFGCTDAVQVAKEVEECKKEYPHAF-IRIIGFDNNRQVQCIS 171 HSP 2 Score: 28.8758 bits (63), Expect = 1.137e-31 Identity = 12/24 (50.00%), Postives = 16/24 (66.67%), Query Frame = 1 Query: 118 PFNGLTSSTAFPWTNKTNNDFTSI 189 PF GL S++AFP T K N D + + Sbjct: 26 PFTGLKSASAFPVTRKPNADLSHL 49
BLAST of EY684888 vs. ExPASy Swiss-Prot
Match: RBS7_FLAPR (Ribulose bisphosphate carboxylase small chain 7, chloroplastic OS=Flaveria pringlei GN=RBCS7 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.483e-31 Identity = 56/95 (58.95%), Postives = 75/95 (78.95%), Query Frame = 2 Query: 191 ASNGVRFQCVKVWPPTGLKKFETLSYLPPLSDETLLREINYLLRSGWIPCLEFQLEKGWVYREHHKTPRYYNGRYWTK*KMTMFGRHKPTQVLKD 475 ASNG R QC+KVWPP G K++ETLSYLP L++ L +E++YLLR+ W+PCLEF+LE G+VYRE+ ++P YY+GRYWT K+ MFG QV+K+ Sbjct: 42 ASNGGRVQCMKVWPPLGKKRYETLSYLPNLTEVQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKE 136 HSP 2 Score: 29.261 bits (64), Expect = 1.483e-31 Identity = 13/31 (41.94%), Postives = 19/31 (61.29%), Query Frame = 1 Query: 118 PFNGLTSSTAFPWTNKTNNDFTSICKQRSKI 210 PF GL S+ AFP T K NDF+++ ++ Sbjct: 19 PFTGLKSNAAFPVTKKV-NDFSTLASNGGRV 48
BLAST of EY684888 vs. ExPASy Swiss-Prot
Match: RBSC_SOLTU (Ribulose bisphosphate carboxylase small chain 2C, chloroplastic OS=Solanum tuberosum GN=RBCS-2C PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.839e-31 Identity = 59/104 (56.73%), Postives = 80/104 (76.92%), Query Frame = 2 Query: 164 RPTMTLLPFASNGVRFQCVKVWPPTGLKKFETLSYLPPLSDETLLREINYLLRSGWIPCLEFQLEKGWVYREHHKTPRYYNGRYWTK*KMTMFGRHKPTQVLKD 475 + + + ASNG R +C++VWPP +KK+ETLSYLP LSDE LL+E+ YLL++GW+PCLEF+ E G+VYRE++K+P YY+GRYWT K+ MFG TQVL + Sbjct: 40 KQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAE 143
BLAST of EY684888 vs. ExPASy Swiss-Prot
Match: RBSB_SOLTU (Ribulose bisphosphate carboxylase small chain 2B, chloroplastic OS=Solanum tuberosum GN=RBCS-2B PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.839e-31 Identity = 59/104 (56.73%), Postives = 80/104 (76.92%), Query Frame = 2 Query: 164 RPTMTLLPFASNGVRFQCVKVWPPTGLKKFETLSYLPPLSDETLLREINYLLRSGWIPCLEFQLEKGWVYREHHKTPRYYNGRYWTK*KMTMFGRHKPTQVLKD 475 + + + ASNG R +C++VWPP +KK+ETLSYLP LSDE LL+E+ YLL++GW+PCLEF+ E G+VYRE++K+P YY+GRYWT K+ MFG TQVL + Sbjct: 40 KQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAE 143
BLAST of EY684888 vs. ExPASy Swiss-Prot
Match: RBSA_SOLTU (Ribulose bisphosphate carboxylase small chain 2A, chloroplastic OS=Solanum tuberosum GN=RBCS-2A PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.839e-31 Identity = 59/104 (56.73%), Postives = 80/104 (76.92%), Query Frame = 2 Query: 164 RPTMTLLPFASNGVRFQCVKVWPPTGLKKFETLSYLPPLSDETLLREINYLLRSGWIPCLEFQLEKGWVYREHHKTPRYYNGRYWTK*KMTMFGRHKPTQVLKD 475 + + + ASNG R +C++VWPP +KK+ETLSYLP LSDE LL+E+ YLL++GW+PCLEF+ E G+VYRE++K+P YY+GRYWT K+ MFG TQVL + Sbjct: 40 KQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAE 143
BLAST of EY684888 vs. ExPASy Swiss-Prot
Match: RBS2_NICSY (Ribulose bisphosphate carboxylase small chain S41, chloroplastic OS=Nicotiana sylvestris PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.402e-31 Identity = 60/104 (57.69%), Postives = 79/104 (75.96%), Query Frame = 2 Query: 164 RPTMTLLPFASNGVRFQCVKVWPPTGLKKFETLSYLPPLSDETLLREINYLLRSGWIPCLEFQLEKGWVYREHHKTPRYYNGRYWTK*KMTMFGRHKPTQVLKD 475 + + + ASNG R QC++VWPP KK+ETLSYLP LS+E LLRE+ YLL++GW+PCLEF+ E G+VYRE++K+P YY+GRYWT K+ MFG TQVL + Sbjct: 41 KQNLDITSIASNGGRVQCMQVWPPINKKKYETLSYLPDLSEEQLLREVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAE 144
BLAST of EY684888 vs. ExPASy Swiss-Prot
Match: RBS_HEVBR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Hevea brasiliensis GN=RBCS PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 3.137e-31 Identity = 60/104 (57.69%), Postives = 77/104 (74.04%), Query Frame = 2 Query: 164 RPTMTLLPFASNGVRFQCVKVWPPTGLKKFETLSYLPPLSDETLLREINYLLRSGWIPCLEFQLEKGWVYREHHKTPRYYNGRYWTK*KMTMFGRHKPTQVLKD 475 + T + ASNG R QC++VWPP G K +ETLSYLPPL+ E L +E+ YLLR GW+PCLEF+LE G VYRE+H++P YY+GRYWT K+ MFG QVL++ Sbjct: 42 KTTTDITSIASNGGRVQCMQVWPPRGKKFYETLSYLPPLTREQLAKEVEYLLRKGWVPCLEFELEHGTVYREYHRSPGYYDGRYWTMWKLPMFGCTDAVQVLQE 145 The following BLAST results are available for this feature:
BLAST of EY684888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 104
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684888 ID=EY684888; Name=EY684888; organism=Citrus sinensis; type=EST; length=947bpback to top |