EY684744

Overview
NameEY684744
Unique NameEY684744
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684744 vs. ExPASy Swiss-Prot
Match: HIS6_BRUO2 (Imidazole glycerol phosphate synthase subunit hisF OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=hisF PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.798e-15
Identity = 45/106 (42.45%), Postives = 63/106 (59.43%), Query Frame = 1
Query:    1 REGRPIGAYELAKAVEDLGAGEILLNCIDCDGQGKGFDMDLIKLISDAVSIPVIASSGAGAVEHFSDVFRKTNASAALAAGIFHRKEVPIQSVKEHLYKEGIEVRI 318
            R+   I A E A+ V DLGAGEILL  +D DG   G+D+ L + ++D+V  PVIAS G G ++H     R  +A+A LAA IFH     I   K ++ + GI +R+
Sbjct:  152 RQPTGIDAVEFAQKVVDLGAGEILLTSMDRDGTKAGYDVALTRAVADSVRAPVIASGGVGTLDHLVAGIRDGHATAVLAASIFHFGTYTIGEAKRYMAEAGIPMRL 257          
BLAST of EY684744 vs. ExPASy Swiss-Prot
Match: HIS6_BRUME (Imidazole glycerol phosphate synthase subunit hisF OS=Brucella melitensis GN=hisF PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.798e-15
Identity = 45/106 (42.45%), Postives = 63/106 (59.43%), Query Frame = 1
Query:    1 REGRPIGAYELAKAVEDLGAGEILLNCIDCDGQGKGFDMDLIKLISDAVSIPVIASSGAGAVEHFSDVFRKTNASAALAAGIFHRKEVPIQSVKEHLYKEGIEVRI 318
            R+   I A E A+ V DLGAGEILL  +D DG   G+D+ L + ++D+V  PVIAS G G ++H     R  +A+A LAA IFH     I   K ++ + GI +R+
Sbjct:  152 RQPTGIDAVEFAQKVVDLGAGEILLTSMDRDGTKAGYDVALTRAVADSVRAPVIASGGVGTLDHLVAGIRDGHATAVLAASIFHFGTYTIGEAKRYMAEAGIPMRL 257          
BLAST of EY684744 vs. ExPASy Swiss-Prot
Match: HIS6_BRUMB (Imidazole glycerol phosphate synthase subunit hisF OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=hisF PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.798e-15
Identity = 45/106 (42.45%), Postives = 63/106 (59.43%), Query Frame = 1
Query:    1 REGRPIGAYELAKAVEDLGAGEILLNCIDCDGQGKGFDMDLIKLISDAVSIPVIASSGAGAVEHFSDVFRKTNASAALAAGIFHRKEVPIQSVKEHLYKEGIEVRI 318
            R+   I A E A+ V DLGAGEILL  +D DG   G+D+ L + ++D+V  PVIAS G G ++H     R  +A+A LAA IFH     I   K ++ + GI +R+
Sbjct:  152 RQPTGIDAVEFAQKVVDLGAGEILLTSMDRDGTKAGYDVALTRAVADSVRAPVIASGGVGTLDHLVAGIRDGHATAVLAASIFHFGTYTIGEAKRYMAEAGIPMRL 257          
BLAST of EY684744 vs. ExPASy Swiss-Prot
Match: HIS6_BRUC2 (Imidazole glycerol phosphate synthase subunit hisF OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=hisF PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.798e-15
Identity = 45/106 (42.45%), Postives = 63/106 (59.43%), Query Frame = 1
Query:    1 REGRPIGAYELAKAVEDLGAGEILLNCIDCDGQGKGFDMDLIKLISDAVSIPVIASSGAGAVEHFSDVFRKTNASAALAAGIFHRKEVPIQSVKEHLYKEGIEVRI 318
            R+   I A E A+ V DLGAGEILL  +D DG   G+D+ L + ++D+V  PVIAS G G ++H     R  +A+A LAA IFH     I   K ++ + GI +R+
Sbjct:  152 RQPTGIDAVEFAQKVVDLGAGEILLTSMDRDGTKAGYDVALTRAVADSVRAPVIASGGVGTLDHLVAGIRDGHATAVLAASIFHFGTYTIGEAKRYMAEAGIPMRL 257          
BLAST of EY684744 vs. ExPASy Swiss-Prot
Match: HIS6_BRUAB (Imidazole glycerol phosphate synthase subunit hisF OS=Brucella abortus GN=hisF PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.798e-15
Identity = 45/106 (42.45%), Postives = 63/106 (59.43%), Query Frame = 1
Query:    1 REGRPIGAYELAKAVEDLGAGEILLNCIDCDGQGKGFDMDLIKLISDAVSIPVIASSGAGAVEHFSDVFRKTNASAALAAGIFHRKEVPIQSVKEHLYKEGIEVRI 318
            R+   I A E A+ V DLGAGEILL  +D DG   G+D+ L + ++D+V  PVIAS G G ++H     R  +A+A LAA IFH     I   K ++ + GI +R+
Sbjct:  152 RQPTGIDAVEFAQKVVDLGAGEILLTSMDRDGTKAGYDVALTRAVADSVRAPVIASGGVGTLDHLVAGIRDGHATAVLAASIFHFGTYTIGEAKRYMAEAGIPMRL 257          
BLAST of EY684744 vs. ExPASy Swiss-Prot
Match: HIS6_BRUA2 (Imidazole glycerol phosphate synthase subunit hisF OS=Brucella abortus (strain 2308) GN=hisF PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.798e-15
Identity = 45/106 (42.45%), Postives = 63/106 (59.43%), Query Frame = 1
Query:    1 REGRPIGAYELAKAVEDLGAGEILLNCIDCDGQGKGFDMDLIKLISDAVSIPVIASSGAGAVEHFSDVFRKTNASAALAAGIFHRKEVPIQSVKEHLYKEGIEVRI 318
            R+   I A E A+ V DLGAGEILL  +D DG   G+D+ L + ++D+V  PVIAS G G ++H     R  +A+A LAA IFH     I   K ++ + GI +R+
Sbjct:  152 RQPTGIDAVEFAQKVVDLGAGEILLTSMDRDGTKAGYDVALTRAVADSVRAPVIASGGVGTLDHLVAGIRDGHATAVLAASIFHFGTYTIGEAKRYMAEAGIPMRL 257          
BLAST of EY684744 vs. ExPASy Swiss-Prot
Match: HIS6_BRUA1 (Imidazole glycerol phosphate synthase subunit hisF OS=Brucella abortus (strain S19) GN=hisF PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.798e-15
Identity = 45/106 (42.45%), Postives = 63/106 (59.43%), Query Frame = 1
Query:    1 REGRPIGAYELAKAVEDLGAGEILLNCIDCDGQGKGFDMDLIKLISDAVSIPVIASSGAGAVEHFSDVFRKTNASAALAAGIFHRKEVPIQSVKEHLYKEGIEVRI 318
            R+   I A E A+ V DLGAGEILL  +D DG   G+D+ L + ++D+V  PVIAS G G ++H     R  +A+A LAA IFH     I   K ++ + GI +R+
Sbjct:  152 RQPTGIDAVEFAQKVVDLGAGEILLTSMDRDGTKAGYDVALTRAVADSVRAPVIASGGVGTLDHLVAGIRDGHATAVLAASIFHFGTYTIGEAKRYMAEAGIPMRL 257          
BLAST of EY684744 vs. ExPASy Swiss-Prot
Match: HIS6_ARTAT (Imidazole glycerol phosphate synthase subunit hisF OS=Arthrobacter aurescens (strain TC1) GN=hisF PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.798e-15
Identity = 50/106 (47.17%), Postives = 60/106 (56.60%), Query Frame = 1
Query:    1 REGRPIGAYELAKAVEDLGAGEILLNCIDCDGQGKGFDMDLIKLISDAVSIPVIASSGAGAVEHFSDVFRKTNASAALAAGIFH-RKEVPIQSVKEHLYKEGIEVR 315
            R G  I A   AK   D G GEILLN ID DG   GFD++LI+L+  AV+IP+IAS GAG   HF     +  A A LAA +FH   +  I  VK  +   G EVR
Sbjct:  154 RTGTGIDAVAWAKEAADRGVGEILLNSIDADGTKDGFDLELIRLVRAAVNIPIIASGGAGVPAHFPPAV-EAGADAVLAASVFHFGPDDMIAQVKTAIRDAGFEVR 258          
BLAST of EY684744 vs. ExPASy Swiss-Prot
Match: HIS6_ANASP (Imidazole glycerol phosphate synthase subunit hisF OS=Anabaena sp. (strain PCC 7120) GN=hisF PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.798e-15
Identity = 40/106 (37.74%), Postives = 63/106 (59.43%), Query Frame = 1
Query:    1 REGRPIGAYELAKAVEDLGAGEILLNCIDCDGQGKGFDMDLIKLISDAVSIPVIASSGAGAVEHFSDVFRKTNASAALAAGIFHRKEVPIQSVKEHLYKEGIEVRI 318
            RE   + A   AK VE  GAGE+L+  +D DG   G+D++L + I+++V IPV+AS GAG  EH      +  A AAL A + H  ++ +  +K +L++  + VR+
Sbjct:  150 RENTGLDALSWAKEVEKRGAGELLVTSMDADGTQAGYDIELTRAIAESVEIPVVASGGAGNCEHIYTALTEGKAEAALLASLLHYGQLSVAEIKNYLHESQVPVRL 255          
BLAST of EY684744 vs. ExPASy Swiss-Prot
Match: HIS61_SYNPX (Imidazole glycerol phosphate synthase subunit hisF1 OS=Synechococcus sp. (strain WH8102) GN=hisF1 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.798e-15
Identity = 42/109 (38.53%), Postives = 65/109 (59.63%), Query Frame = 1
Query:    1 REGRPIGAYELAKAVEDLGAGEILLNCIDCDGQGKGFDMDLIKLISDAVSIPVIASSGAGAVEHFSDVFRK----TNASAALAAGIFHRKEVPIQSVKEHLYKEGIEVR 315
            RE   + A + A+ V +LGAGEILL  +D DG   G+D+ L + ++DAV +PVIAS GAG ++H +          +ASAAL A + H   + ++ +K+ L   G+ +R
Sbjct:  147 RENTGLDAVDWARRVAELGAGEILLTSMDGDGTQAGYDLALTRAVADAVPVPVIASGGAGCIDHIAQALETGPDGGHASAALLASLLHDGVLTVEEIKQDLLARGLSIR 255          
The following BLAST results are available for this feature:
BLAST of EY684744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HIS6_BRUO22.798e-1542.45Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_BRUME2.798e-1542.45Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_BRUMB2.798e-1542.45Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_BRUC22.798e-1542.45Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_BRUAB2.798e-1542.45Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_BRUA22.798e-1542.45Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_BRUA12.798e-1542.45Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_ARTAT2.798e-1547.17Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_ANASP2.798e-1537.74Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS61_SYNPX2.798e-1538.53Imidazole glycerol phosphate synthase subunit hisF... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-003-B03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684744 ID=EY684744; Name=EY684744; organism=Citrus sinensis; type=EST; length=875bp
CGAGAAGGTCGACCAATTGGAGCTTATGAGCTTGCCAAAGCAGTTGAAGA
TCTTGGAGCTGGAGAGATACTATTGAATTGCATTGACTGTGATGGTCAAG
GGAAAGGGTTTGATATGGATCTAATAAAGTTGATCTCAGATGCTGTGAGC
ATCCCTGTGATTGCAAGTAGTGGTGCAGGTGCTGTTGAGCACTTCTCTGA
TGTTTTTAGGAAAACAAATGCATCTGCTGCCCTTGCTGCTGGCATTTTCC
ATCGAAAGGAGGTCCCCATTCAGTCTGTAAAAGAGCATTTGTACAAGGAA
GGGATAGAAGTTAGGATCTAACTTGGTGAATTCTGGGTAAGTTGGGATTT
AATGGTTGGCATTTGAACTTGATGAATACACTTTGCTTCGGATGAAGAAT
GAGGTAGTGAAGACTACAAGTAAAGATGGGCTGCACACTCCTCAAAGTGG
CTTTCTTCTGCTGACTTCCAAGCATTCCATGGATGACGCCCCACTAGGAC
CCACACACCCACACCTGGACCCCTCGACCACAACCGAAGTCCCTCCCCGA
AAAACCCACAATACCCTAACCAAGACGCCCCACACTCGAAATCCGCGCAT
TACAGCCACTGGGAGTCAGCCCGGGACGACCGCGCCAACCGACACAAAAA
GAACCGCACTCTCCAACCCGCAACACACATCCCCACCATGAAACAGCGAA
GGCAGAACCAAACAAAACACCACACGAGGGGAGACAACAACACGAAGCAA
GGGCAAACCACACGAGTCATGAACAACACAAAACCCCACCCCCCGCCACG
CGACGAACACGCCAACAAAGAGGCACACGGAACACAACCACACGAGCACG
CCCCACCACGACCCCACACGCCCTA
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