EY684744

Overview
NameEY684744
Unique NameEY684744
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684744 vs. ExPASy Swiss-Prot
Match: HIS6_BACLD (Imidazole glycerol phosphate synthase subunit hisF OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=hisF PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.772e-20
Identity = 52/105 (49.52%), Postives = 66/105 (62.86%), Query Frame = 1
Query:    1 REGRPIGAYELAKAVEDLGAGEILLNCIDCDGQGKGFDMDLIKLISDAVSIPVIASSGAGAVEHFSDVFRKTNASAALAAGIFHRKEVPIQSVKEHLYKEGIEVR 315
            R+   + A   AK     GAGEILL  +D DG+  GFD  L KL+S+AVS+PVIAS GAG  +H  D F +  A AALAA IFH KE  ++ VK +L + G+ VR
Sbjct:  148 RKKTNLEAVSWAKEAVRRGAGEILLTSMDSDGEKNGFDCRLTKLVSEAVSVPVIASGGAGRADHMYDAFAEGRADAALAASIFHYKETSVKEVKAYLKERGVNVR 252          
BLAST of EY684744 vs. ExPASy Swiss-Prot
Match: HIS6_BACCR (Imidazole glycerol phosphate synthase subunit hisF OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=hisF PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.772e-20
Identity = 54/99 (54.55%), Postives = 64/99 (64.65%), Query Frame = 1
Query:   22 AYELAKAVEDLGAGEILLNCIDCDGQGKGFDMDLIKLISDAVSIPVIASSGAGAVEHFSDVFRKTNASAALAAGIFHRKEVPIQSVKEHLYKEGIEVRI 318
            A E AK V  LGAGEILL  +D DG   G+D+ L + IS +VSIPVIAS G G  +H  +VF+KT   AALAA IFH  E  +QSVK  L    IEVR+
Sbjct:  154 AIEWAKRVVKLGAGEILLTSMDADGTKSGYDLRLTEEISKSVSIPVIASGGCGHTDHIIEVFQKTTVDAALAASIFHYGEATVQSVKRKLRDANIEVRL 252          
BLAST of EY684744 vs. ExPASy Swiss-Prot
Match: HIS6_THEFY (Imidazole glycerol phosphate synthase subunit hisF OS=Thermobifida fusca (strain YX) GN=hisF PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.927e-20
Identity = 52/105 (49.52%), Postives = 68/105 (64.76%), Query Frame = 1
Query:    1 REGRPIGAYELAKAVEDLGAGEILLNCIDCDGQGKGFDMDLIKLISDAVSIPVIASSGAGAVEHFSDVFRKTNASAALAAGIFHRKEVPIQSVKEHLYKEGIEVR 315
            R+G  I A E  +  E+LGAGEILLN +D DG   GFD++LI+ +  AV++P+IAS GAGAVEHF+       A+A LAA +FH  E+ I  VK  L  +G  VR
Sbjct:  153 RQGTGIDAVEWVQQAEELGAGEILLNSMDADGTKSGFDLELIRAVRKAVNVPLIASGGAGAVEHFAPAV-DAGANAVLAASVFHFGEITISDVKAELRAKGYPVR 256          
BLAST of EY684744 vs. ExPASy Swiss-Prot
Match: HIS6_CHLPB (Imidazole glycerol phosphate synthase subunit hisF OS=Chlorobium phaeobacteroides (strain BS1) GN=hisF PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.927e-20
Identity = 52/99 (52.53%), Postives = 69/99 (69.70%), Query Frame = 1
Query:   22 AYELAKAVEDLGAGEILLNCIDCDGQGKGFDMDLIKLISDAVSIPVIASSGAGAVEHFSDVFRKTNASAALAAGIFHRKEVPIQSVKEHLYKEGIEVRI 318
            A E A+ V++LGAGEILL  +D DG   G+D ++++ IS +V IPVIAS GAG +EH  D F K  A AALAA IFH ++  I+  KE+L + GIEVR+
Sbjct:  153 ALEWARMVQELGAGEILLTSMDRDGTKAGYDNEILREISTSVHIPVIASGGAGNLEHLYDGFAKGCADAALAASIFHFRQYTIREAKEYLRERGIEVRL 251          
BLAST of EY684744 vs. ExPASy Swiss-Prot
Match: HIS6_CAMFF (Imidazole glycerol phosphate synthase subunit hisF OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=hisF PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.927e-20
Identity = 54/101 (53.47%), Postives = 67/101 (66.34%), Query Frame = 1
Query:   16 IGAYELAKAVEDLGAGEILLNCIDCDGQGKGFDMDLIKLISDAVSIPVIASSGAGAVEHFSDVFRKTNASAALAAGIFHRKEVPIQSVKEHLYKEGIEVRI 318
            I AYE AK V +LGAGEILL  +D DG   G+D+++   IS+ V IPVIAS GAG +EH  + F K  A AALAA IFH KE+ I  +K++L    I VRI
Sbjct:  153 IDAYEWAKKVYELGAGEILLTSMDSDGTKNGYDLEVTSKISNLVGIPVIASGGAGTMEHILEAF-KFGADAALAASIFHYKEIEISELKKYLLANDIGVRI 252          
BLAST of EY684744 vs. ExPASy Swiss-Prot
Match: HIS6_BACC2 (Imidazole glycerol phosphate synthase subunit hisF OS=Bacillus cereus (strain G9842) GN=hisF PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.927e-20
Identity = 53/99 (53.54%), Postives = 64/99 (64.65%), Query Frame = 1
Query:   22 AYELAKAVEDLGAGEILLNCIDCDGQGKGFDMDLIKLISDAVSIPVIASSGAGAVEHFSDVFRKTNASAALAAGIFHRKEVPIQSVKEHLYKEGIEVRI 318
            A E AK V  LGAGEILL  +D DG   G+D+ L + IS +VSIPVIAS G G  +H  +VF+KT   AALAA IFH  E  +QSVK  L    +EVR+
Sbjct:  154 AIEWAKRVVKLGAGEILLTSMDADGTKSGYDLRLTEEISKSVSIPVIASGGCGHTDHIIEVFQKTTVDAALAASIFHYGEATVQSVKRKLRDANVEVRL 252          
BLAST of EY684744 vs. ExPASy Swiss-Prot
Match: HIS6_PELPB (Imidazole glycerol phosphate synthase subunit hisF OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=hisF PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.434e-20
Identity = 53/99 (53.54%), Postives = 68/99 (68.69%), Query Frame = 1
Query:   22 AYELAKAVEDLGAGEILLNCIDCDGQGKGFDMDLIKLISDAVSIPVIASSGAGAVEHFSDVFRKTNASAALAAGIFHRKEVPIQSVKEHLYKEGIEVRI 318
            A E A  V++LGAGEILL  +D DG  +G+D D++  IS +V IPVIAS GAG +EH  D F K +A AALAA IFH ++  I+  KE+L + GI VRI
Sbjct:  153 ALEWAHKVQELGAGEILLTSMDRDGTKEGYDNDILAKISTSVHIPVIASGGAGNLEHLYDGFTKGHADAALAASIFHFRQHSIREAKEYLRQRGITVRI 251          
BLAST of EY684744 vs. ExPASy Swiss-Prot
Match: HIS6_PELLD (Imidazole glycerol phosphate synthase subunit hisF OS=Pelodictyon luteolum (strain DSM 273) GN=hisF PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.434e-20
Identity = 53/99 (53.54%), Postives = 68/99 (68.69%), Query Frame = 1
Query:   22 AYELAKAVEDLGAGEILLNCIDCDGQGKGFDMDLIKLISDAVSIPVIASSGAGAVEHFSDVFRKTNASAALAAGIFHRKEVPIQSVKEHLYKEGIEVRI 318
            A E A  V++LGAGEILL  +D DG  +G+D D + LIS AV IPVIAS GAG++EH  D F K +A AALAA IFH ++  I+  K++L   GI VR+
Sbjct:  153 ALEWALKVQELGAGEILLTSMDRDGTKEGYDNDSLALISTAVHIPVIASGGAGSLEHLYDGFTKGHADAALAASIFHFRQHSIREAKQYLRDRGITVRL 251          
BLAST of EY684744 vs. ExPASy Swiss-Prot
Match: HIS6_LISW6 (Imidazole glycerol phosphate synthase subunit hisF OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=hisF PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.434e-20
Identity = 52/105 (49.52%), Postives = 68/105 (64.76%), Query Frame = 1
Query:    1 REGRPIGAYELAKAVEDLGAGEILLNCIDCDGQGKGFDMDLIKLISDAVSIPVIASSGAGAVEHFSDVFRKTNASAALAAGIFHRKEVPIQSVKEHLYKEGIEVR 315
            RE   + A + AK    LGAGEILL  +D DG   G+D+ L K IS+AVS+PVIAS G G   H  +VF +T+A+AALAA IFH  E+ I  VK  L ++G+ +R
Sbjct:  146 REDTGLDAVKWAKKAVGLGAGEILLTSMDGDGTKNGYDIPLTKAISEAVSVPVIASGGCGNANHMVEVFEQTSATAALAASIFHYGELSITHVKNTLLEKGVNIR 250          
BLAST of EY684744 vs. ExPASy Swiss-Prot
Match: HIS6_CLOB8 (Imidazole glycerol phosphate synthase subunit hisF OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=hisF PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.434e-20
Identity = 51/107 (47.66%), Postives = 69/107 (64.49%), Query Frame = 1
Query:    7 GRPIGAYELAKAVED---LGAGEILLNCIDCDGQGKGFDMDLIKLISDAVSIPVIASSGAGAVEHFSDVFRKTNASAALAAGIFHRKEVPIQSVKEHLYKEGIEVRI 318
            GR     +L K +E+   LGAGEILL  +D DG  KGFD++L K +SD  ++PVIAS G G +E F DVF+   A AALAA +FH  E+ +  VK +L+ + + VRI
Sbjct:  147 GRIDTGLDLLKWIEEATALGAGEILLTSMDADGTKKGFDLELTKAVSDITNVPVIASGGCGCLEDFYDVFKSNIADAALAASLFHYGELTVDEVKRYLHDKNVSVRI 253          
The following BLAST results are available for this feature:
BLAST of EY684744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HIS6_BACLD3.772e-2049.52Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_BACCR3.772e-2054.55Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_THEFY4.927e-2049.52Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_CHLPB4.927e-2052.53Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_CAMFF4.927e-2053.47Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_BACC24.927e-2053.54Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_PELPB6.434e-2053.54Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_PELLD6.434e-2053.54Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_LISW66.434e-2049.52Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_CLOB86.434e-2047.66Imidazole glycerol phosphate synthase subunit hisF... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-003-B03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684744 ID=EY684744; Name=EY684744; organism=Citrus sinensis; type=EST; length=875bp
CGAGAAGGTCGACCAATTGGAGCTTATGAGCTTGCCAAAGCAGTTGAAGA
TCTTGGAGCTGGAGAGATACTATTGAATTGCATTGACTGTGATGGTCAAG
GGAAAGGGTTTGATATGGATCTAATAAAGTTGATCTCAGATGCTGTGAGC
ATCCCTGTGATTGCAAGTAGTGGTGCAGGTGCTGTTGAGCACTTCTCTGA
TGTTTTTAGGAAAACAAATGCATCTGCTGCCCTTGCTGCTGGCATTTTCC
ATCGAAAGGAGGTCCCCATTCAGTCTGTAAAAGAGCATTTGTACAAGGAA
GGGATAGAAGTTAGGATCTAACTTGGTGAATTCTGGGTAAGTTGGGATTT
AATGGTTGGCATTTGAACTTGATGAATACACTTTGCTTCGGATGAAGAAT
GAGGTAGTGAAGACTACAAGTAAAGATGGGCTGCACACTCCTCAAAGTGG
CTTTCTTCTGCTGACTTCCAAGCATTCCATGGATGACGCCCCACTAGGAC
CCACACACCCACACCTGGACCCCTCGACCACAACCGAAGTCCCTCCCCGA
AAAACCCACAATACCCTAACCAAGACGCCCCACACTCGAAATCCGCGCAT
TACAGCCACTGGGAGTCAGCCCGGGACGACCGCGCCAACCGACACAAAAA
GAACCGCACTCTCCAACCCGCAACACACATCCCCACCATGAAACAGCGAA
GGCAGAACCAAACAAAACACCACACGAGGGGAGACAACAACACGAAGCAA
GGGCAAACCACACGAGTCATGAACAACACAAAACCCCACCCCCCGCCACG
CGACGAACACGCCAACAAAGAGGCACACGGAACACAACCACACGAGCACG
CCCCACCACGACCCCACACGCCCTA
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