EY684688

Overview
NameEY684688
Unique NameEY684688
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: SAR1_CHAGB (Small COPII coat GTPase SAR1 OS=Chaetomium globosum GN=SAR1 PE=3 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.576e-19
Identity = 53/152 (34.87%), Postives = 91/152 (59.87%), Query Frame = 2
Query:  125 LNW----LQSL-FFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDR 565
            +NW    L SL    +  +L  +GL NAGKT+L++++     +  + PT+     + + GNV    +DLGG  + R +W+ Y   V+ +V++VDA D++  P +++EL  LL+   L+ +P +VLGNKID P A+S+++L  Q+G+   T +
Sbjct:    4 INWFYDVLSSLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAI-LQPTLHPTSEELSIGNVRFTTFDLGGHQQARRLWKDYFPEVNGVVFLVDAKDHERFPEAKAELDALLSMEELSKVPFVVLGNKIDHPDAVSEDELRHQLGMYQTTGK 154          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: SAR1_ASPCL (Small COPII coat GTPase sar1 OS=Aspergillus clavatus GN=sar1 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.576e-19
Identity = 53/152 (34.87%), Postives = 85/152 (55.92%), Query Frame = 2
Query:  125 LNWLQSLF-----FKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDR 565
            +NW   +        +  +L  +GL NAGKT+L++++     +  + PT      +   GN     +DLGG  + R +W+ Y   VS IV++VDA D++  P S++EL  LL    L+ +P L+LGNKID P A+S+++L  Q+GL   T +
Sbjct:    4 INWFYDVLASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAT-LQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELSKVPFLILGNKIDHPDAVSEDELRHQLGLYQTTGK 154          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: ARL11_RAT (ADP-ribosylation factor-like protein 11 OS=Rattus norvegicus GN=Arl11 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.576e-19
Identity = 48/134 (35.82%), Postives = 82/134 (61.19%), Query Frame = 2
Query:  164 ELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRK-ETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITD 562
            ++ ++GL  AGKT+++  +  G    D +PTVGFN+   E  G+V++ LWD+GGQ + R+ W+ Y   +  +VYV+D+ D   LP + +EL ++L   ++ G+P LVL NK + P AL   ++  ++ L+   D
Sbjct:   12 QVVMLGLDCAGKTTILYKLK-GNRLVDTLPTVGFNVEPLEAPGHVSLTLWDIGGQTQLRATWKDYLEGIDLLVYVLDSTDEARLPEAVAELEEVLEDPNMAGVPFLVLANKQEAPDALPLLEIRNRLDLERFQD 144          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: SAR1_ASPNC (Small COPII coat GTPase SAR1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=sar1 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.395e-19
Identity = 54/152 (35.53%), Postives = 84/152 (55.26%), Query Frame = 2
Query:  125 LNWLQSLF-----FKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDR 565
            +NW   L        +  +L  +GL NAGKT+L++++     +  + PT      +   GN     +DLGG  + R +W+ Y   VS IV++VDA D++  P S++EL  LL    L  +P L+LGNKID P A+S+++L  Q+GL   T +
Sbjct:    4 INWFYDLLASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAI-LQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQTTGK 154          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: SAR1_ASPFU (Small COPII coat GTPase sar1 OS=Aspergillus fumigatus GN=sar1 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.395e-19
Identity = 53/152 (34.87%), Postives = 84/152 (55.26%), Query Frame = 2
Query:  125 LNWLQSLF-----FKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDR 565
            +NW   +        +  +L  +GL NAGKT+L++++     +  + PT      +   GN     +DLGG  + R +W+ Y   VS IV++VDA D++  P S++EL  LL    L  +P L+LGNKID P A+S+++L  Q+GL   T +
Sbjct:    4 INWFYDILASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAT-LQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQTTGK 154          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: ARL3_DANRE (ADP-ribosylation factor-like protein 3 OS=Danio rerio GN=arl3 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.395e-19
Identity = 47/137 (34.31%), Postives = 77/137 (56.20%), Query Frame = 2
Query:  155 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDR 565
            QE+ + L+GL N GKT+L+  +A+   +  + PT GFN++        + +WD+GGQ + R  W  Y      ++YV+D+AD      +  EL +LL++  L+G+P+LV  NK D   A    ++ E + L +I DR
Sbjct:   16 QEVRILLLGLDNGGKTTLLKQLASEDITH-ITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDVLIYVIDSADRKRFEETGQELAELLDEEKLSGVPVLVFANKQDLLTAAPASEIAEGLNLHTIRDR 151          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: ARL1_YEAST (ADP-ribosylation factor-like protein 1 OS=Saccharomyces cerevisiae GN=ARL1 PE=1 SV=4)

HSP 1 Score: 95.1301 bits (235), Expect = 4.395e-19
Identity = 51/151 (33.77%), Postives = 83/151 (54.97%), Query Frame = 2
Query:  128 NWLQSLFFK-----QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDR 565
            N   S+F K     +E+ + ++GL  AGKT+++  +  G       PT+GFN+   +  N+ + +WDLGGQ   R  W  Y    +A+++VVD+ D D +  +  ELH +L +  L    LLV  NK D+P ALS  ++ +++ L  + DR
Sbjct:    3 NIFSSMFDKLWGSNKELRILILGLDGAGKTTILYRLQIGEVVTTK-PTIGFNVETLSYKNLKLNVWDLGGQTSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQDQPGALSASEVSKELNLVELKDR 152          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: SAR1_TRIRE (Small COPII coat GTPase sar1 OS=Trichoderma reesei GN=sar1 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.740e-19
Identity = 53/152 (34.87%), Postives = 89/152 (58.55%), Query Frame = 2
Query:  125 LNW----LQSL-FFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDR 565
            +NW    L SL    +  +L  +GL NAGKT+L++++     +  + PT+     +   GNV    +DLGG  + R +W  Y   V+ +V++VDA D++  P +++EL  LL+   L+ +P ++LGNKID P A+S+++L  Q+GL   T +
Sbjct:    4 VNWFYDVLSSLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAI-LQPTLHPTSEELAIGNVRFNTFDLGGHQQARRIWRDYFPDVNGVVFLVDAKDHERFPEAKAELDALLSMEELSKVPFVILGNKIDHPDAVSEDELRHQLGLYQTTGK 154          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: SAR1_NEOFI (Small COPII coat GTPase sar1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=sar1 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.740e-19
Identity = 53/152 (34.87%), Postives = 84/152 (55.26%), Query Frame = 2
Query:  125 LNWLQSLF-----FKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDR 565
            +NW   +        +  +L  +GL NAGKT+L++++     +  + PT      +   GN     +DLGG  + R +W+ Y   VS IV++VDA D++  P S++EL  LL    L  +P L+LGNKID P A+S+++L  Q+GL   T +
Sbjct:    4 INWFYDVLASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAT-LQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQTTGK 154          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: ARF2_DROME (ADP-ribosylation factor 2 OS=Drosophila melanogaster GN=Arf102F PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 5.740e-19
Identity = 47/144 (32.64%), Postives = 81/144 (56.25%), Query Frame = 2
Query:  134 LQSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDR 565
            L  LF K++M + ++GL  AGKT+++  +  G      IPT+GFN+      N+   +WD+GGQ + R +W  Y +    +++VVD+ D D +  +  EL ++L +  L    LLV  NK D P A++  +L +++ L  + +R
Sbjct:    9 LTRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAVLLVFANKQDLPNAMTAAELTDKLRLNQLRNR 151          
The following BLAST results are available for this feature:
BLAST of EY684688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
SAR1_CHAGB2.576e-1934.87Small COPII coat GTPase SAR1 OS=Chaetomium globosu... [more]
SAR1_ASPCL2.576e-1934.87Small COPII coat GTPase sar1 OS=Aspergillus clavat... [more]
ARL11_RAT2.576e-1935.82ADP-ribosylation factor-like protein 11 OS=Rattus ... [more]
SAR1_ASPNC4.395e-1935.53Small COPII coat GTPase SAR1 OS=Aspergillus niger ... [more]
SAR1_ASPFU4.395e-1934.87Small COPII coat GTPase sar1 OS=Aspergillus fumiga... [more]
ARL3_DANRE4.395e-1934.31ADP-ribosylation factor-like protein 3 OS=Danio re... [more]
ARL1_YEAST4.395e-1933.77ADP-ribosylation factor-like protein 1 OS=Saccharo... [more]
SAR1_TRIRE5.740e-1934.87Small COPII coat GTPase sar1 OS=Trichoderma reesei... [more]
SAR1_NEOFI5.740e-1934.87Small COPII coat GTPase sar1 OS=Neosartorya fische... [more]
ARF2_DROME5.740e-1932.64ADP-ribosylation factor 2 OS=Drosophila melanogast... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-002-C09-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684688 ID=EY684688; Name=EY684688; organism=Citrus sinensis; type=EST; length=763bp
AATTGTAGGAGAAAAGAGAAGAAGCAAGAAAAGTTTTTTCGCTTTTTCCC
AGCTTTTATACTTCAAAGGCGAAACCCTAGCTTCTTATTTTGTCGAATAA
AAGATGGGATTATGGGAAGCTTTTCTCAACTGGCTTCAAAGTCTCTTCTT
TAAACAAGAAATGGAGCTATCTTTGATAGGGCTTCAGAATGCAGGCAAGA
CATCCCTTGTGAATGTTATCGCAACTGGTGGATATAGTGAAGATATGATC
CCAACAGTAGGATTTAATATGAGGAAAGAGACTAAGGGGAATGTCACAAT
AAAGCTGTGGGATCTTGGAGGCCAACCACGGTTTCGCAGTATGTGGGAGA
GATACTGTCGTGCAGTTTCAGCTATTGTTTACGTTGTTGATGCTGCTGAT
TATGATAACTTGCCTGCGTCAAGAAGTGAACTCCATGACTTGTTAAATAA
AGCCTCGCTGAATGGTATCCCATTGCTGGTACTGGGAAACAAGATTGATA
AACCATAAGCCTTGTCTAAAGAGGATCTGATGGAACAAATGGGGCTGAAG
TCCATTACCGATAGAAAAGTTGTTGCTACATGATTTCATGCAAGAACTCT
ACCAACATTGAAAAGGCTATTGATTGGCCTGTAAAGCATTCAAAAACCAA
AGAGTGAAGTTTCTACCCTCTAGTATAGACACCAATGGGAAGCCTGTTAT
ACAGAACTTGGAATTATGGAAAAATTACAAGGAAGATGAATTGGTAAAGG
CACCGTCGCACCA
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