EY684688

Overview
NameEY684688
Unique NameEY684688
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: ARF1_PLAFA (ADP-ribosylation factor 1 OS=Plasmodium falciparum GN=ARF1 PE=2 SV=3)

HSP 1 Score: 99.3673 bits (246), Expect = 2.330e-20
Identity = 51/154 (33.12%), Postives = 89/154 (57.79%), Query Frame = 2
Query:  104 MGLWEAFLNWLQSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDR 565
            MGL+ + L     LF K+++ + ++GL  AGKT+++  +  G      IPT+GFN+      N++  +WD+GGQ + R +W  Y      +++VVD+ D + +  +R ELH ++N+  L    +LV  NK D P A+S  ++ E++ L +I +R
Sbjct:    1 MGLYVSRL--FNRLFQKKDVRILMVGLDAAGKTTILYKVKLGEVVTT-IPTIGFNVETVEFRNISFTVWDVGGQDKIRPLWRHYYSNTDGLIFVVDSNDRERIDDAREELHRMINEEELKDAIILVFANKQDLPNAMSAAEVTEKLHLNTIRER 151          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: ARF1_BRARP (ADP-ribosylation factor 1 OS=Brassica rapa subsp. pekinensis GN=ARF1 PE=2 SV=3)

HSP 1 Score: 99.3673 bits (246), Expect = 2.330e-20
Identity = 51/149 (34.23%), Postives = 79/149 (53.02%), Query Frame = 2
Query:  122 FLNWLQSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDRK 568
            F     S+F  +E  + ++GL NAGKT+++  +  G      IPT+GFN+      N+  ++WDLGGQ   R  W  Y     A++YVVD++D D +  ++ E H +L +  L G  +L+  NK D P AL    + E + L  I  R+
Sbjct:    5 FTRMFSSVFGNKEARILVLGLDNAGKTTILYRLQMGEVVST-IPTIGFNVETVQYNNIKFQVWDLGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEEELKGAVVLIFANKQDLPGALDDAAVTEALELHKIKSRQ 152          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: ARL11_BOVIN (ADP-ribosylation factor-like protein 11 OS=Bos taurus GN=ARL11 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.043e-20
Identity = 52/140 (37.14%), Postives = 89/140 (63.57%), Query Frame = 2
Query:  152 KQEMELSLIGLQNAGKTSLVNVIATGGYS-EDMIPTVGFNMRK-ETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDR 565
            + E ++ ++GL +AGKT+L+  +   GY   + +PTVGFN+   E  G+V++ LWD+GGQ + R+ W+ +      +VYV+D+ D   LP + +EL ++L+  S+  +PLLVL NK + P ALS  ++ +++GL+    R
Sbjct:   10 RAEAQVVMMGLDSAGKTTLLYRLK--GYQLVETLPTVGFNVEPLEEPGHVSLTLWDVGGQSQLRASWKDHLEGTDILVYVLDSTDEARLPEAVAELREVLDDPSVASVPLLVLANKQEVPQALSLPEIRDRLGLQGFLGR 147          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: ARFH_DICDI (ADP-ribosylation factor H OS=Dictyostelium discoideum GN=arrH PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.043e-20
Identity = 50/151 (33.11%), Postives = 91/151 (60.26%), Query Frame = 2
Query:  119 AFLNWLQSLFF-KQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDRK 568
            +F + + SLF  K++  + +IGL  AGK++L+  +  G      +PT+GFN+      N+++ +WD+GGQ + R++W+ Y    +AI++VVD+ D + +   + E+  LL +  L GI +L+  NK D   A++  ++++ + L SI DRK
Sbjct:   11 SFFSNIFSLFEGKKQTRILMIGLDGAGKSTLLYKLKLGDIVST-VPTIGFNVETIEYKNLSMTVWDVGGQYKIRALWKHYYHGTNAIIFVVDSTDRERMDEVKEEIDTLLIQEELKGIQILIFANKQDMNNAMNTSEIVDSLNLNSIKDRK 160          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: ARF3_ARATH (ADP-ribosylation factor 3 OS=Arabidopsis thaliana GN=ARF3 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 3.043e-20
Identity = 51/149 (34.23%), Postives = 79/149 (53.02%), Query Frame = 2
Query:  122 FLNWLQSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDRK 568
            F     S+F  +E  + ++GL NAGKT+++  +  G      IPT+GFN+      N+  ++WDLGGQ   R  W  Y     A++YVVD++D D +  ++ E H +L +  L G  +L+  NK D P AL    + E + L  I  R+
Sbjct:    5 FTRMFSSVFGNKEARILVLGLDNAGKTTILYRLQMGEVVST-IPTIGFNVETVQYNNIKFQVWDLGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEDELKGAVVLIFANKQDLPGALDDAAVTEALELHKIKSRQ 152          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: ARL2_DROME (ADP-ribosylation factor-like protein 2 OS=Drosophila melanogaster GN=Arf84F PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 3.975e-20
Identity = 58/147 (39.46%), Postives = 84/147 (57.14%), Query Frame = 2
Query:  122 FLNWLQSLFFKQ-EMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSIT 559
            FL  L+ +  K+ EM + L+GL NAGKT+++     G   + + PT+GFN++       T+ +WD+GGQ   RS W  Y  +   +V+VVD+AD   L +   EL  LL +  L G  LLVL NK D P ALS  ++ E + L+ IT
Sbjct:    3 FLTVLKKMRQKEREMRILLLGLDNAGKTTILKRF-NGEPIDTISPTLGFNIKTLEHNGYTLNMWDVGGQKSLRSYWRNYFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAGATLLVLCNKQDLPGALSSNEIKEILHLEDIT 148          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: SAR1_MAGGR (Small COPII coat GTPase SAR1 OS=Magnaporthe grisea GN=SAR1 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.191e-20
Identity = 56/152 (36.84%), Postives = 89/152 (58.55%), Query Frame = 2
Query:  125 LNW----LQSL-FFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDR 565
            +NW    L SL    +  +L  +GL NAGKT+L++++     +  + PT+     +   GNV    +DLGG  + R +W+ Y   V+ IV++VDA D+D  P +++EL  LL+   L  +P ++LGNKID P A+S+E+L  Q+GL   T +
Sbjct:    4 INWFYDVLSSLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAI-LQPTLHPTSEELAIGNVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAKDHDRFPEAKAELDALLSMEELAKVPFVILGNKIDHPEAISEEELRHQLGLYQTTGK 154          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: SAR1_CAEEL (GTP-binding protein SAR1 OS=Caenorhabditis elegans GN=ZK180.4 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.191e-20
Identity = 53/154 (34.42%), Postives = 91/154 (59.09%), Query Frame = 2
Query:  110 LWEAFLNWLQSL-FFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDRK 568
            LW+ F   L  L    ++ +L  +GL NAGKT+L++++     ++  +PT+     + + G ++   +DLGG  + R +W+ Y  AV A+V+++D AD + +  SR EL  LL    +  +P+L+LGNKIDKP ALS++ L  Q+ ++ +   K
Sbjct:    4 LWDWFNGVLNMLGLANKKGKLVFLGLDNAGKTTLLHMLKDDRIAQH-VPTLHPTSEQMSLGGISFTTYDLGGHAQARRVWKDYFPAVDAVVFLIDVADAERMQESRVELESLLQDEQIASVPVLILGNKIDKPGALSEDQLKWQLNIQHMCTGK 156          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: ARL1_DROME (ADP-ribosylation factor-like protein 1 OS=Drosophila melanogaster GN=Arf72A PE=1 SV=5)

HSP 1 Score: 98.2117 bits (243), Expect = 5.191e-20
Identity = 52/147 (35.37%), Postives = 85/147 (57.82%), Query Frame = 2
Query:  125 LNWLQSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDR 565
            L++ + L   +EM + ++GL  AGKT+++  +  G      IPT+GFN+ + T  N+  ++WDLGGQ   R  W  Y     AI+YVVD+AD D +  S+ EL  +L +  L G  L+VL NK D    ++  ++   +GL+++ +R
Sbjct:    5 LSYFRGLLGSREMRILILGLDGAGKTTILYRLQVGEVVTT-IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDMDGCMTVAEVHHALGLENLKNR 150          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: ARF1_SOLTU (ADP-ribosylation factor 1 OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 5.191e-20
Identity = 49/141 (34.75%), Postives = 82/141 (58.16%), Query Frame = 2
Query:  143 LFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDR 565
            LF K+EM + ++GL  AGKT+++  +  G      IPT+GFN+      N++  +WD+GGQ + R +W  Y +    +++VVD+ D D +  +R EL  +L +  L    LLV  NK D P A++  ++ +++GL S+  R
Sbjct:   12 LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQR 151          
The following BLAST results are available for this feature:
BLAST of EY684688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
ARF1_PLAFA2.330e-2033.12ADP-ribosylation factor 1 OS=Plasmodium falciparum... [more]
ARF1_BRARP2.330e-2034.23ADP-ribosylation factor 1 OS=Brassica rapa subsp. ... [more]
ARL11_BOVIN3.043e-2037.14ADP-ribosylation factor-like protein 11 OS=Bos tau... [more]
ARFH_DICDI3.043e-2033.11ADP-ribosylation factor H OS=Dictyostelium discoid... [more]
ARF3_ARATH3.043e-2034.23ADP-ribosylation factor 3 OS=Arabidopsis thaliana ... [more]
ARL2_DROME3.975e-2039.46ADP-ribosylation factor-like protein 2 OS=Drosophi... [more]
SAR1_MAGGR5.191e-2036.84Small COPII coat GTPase SAR1 OS=Magnaporthe grisea... [more]
SAR1_CAEEL5.191e-2034.42GTP-binding protein SAR1 OS=Caenorhabditis elegans... [more]
ARL1_DROME5.191e-2035.37ADP-ribosylation factor-like protein 1 OS=Drosophi... [more]
ARF1_SOLTU5.191e-2034.75ADP-ribosylation factor 1 OS=Solanum tuberosum PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-002-C09-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684688 ID=EY684688; Name=EY684688; organism=Citrus sinensis; type=EST; length=763bp
AATTGTAGGAGAAAAGAGAAGAAGCAAGAAAAGTTTTTTCGCTTTTTCCC
AGCTTTTATACTTCAAAGGCGAAACCCTAGCTTCTTATTTTGTCGAATAA
AAGATGGGATTATGGGAAGCTTTTCTCAACTGGCTTCAAAGTCTCTTCTT
TAAACAAGAAATGGAGCTATCTTTGATAGGGCTTCAGAATGCAGGCAAGA
CATCCCTTGTGAATGTTATCGCAACTGGTGGATATAGTGAAGATATGATC
CCAACAGTAGGATTTAATATGAGGAAAGAGACTAAGGGGAATGTCACAAT
AAAGCTGTGGGATCTTGGAGGCCAACCACGGTTTCGCAGTATGTGGGAGA
GATACTGTCGTGCAGTTTCAGCTATTGTTTACGTTGTTGATGCTGCTGAT
TATGATAACTTGCCTGCGTCAAGAAGTGAACTCCATGACTTGTTAAATAA
AGCCTCGCTGAATGGTATCCCATTGCTGGTACTGGGAAACAAGATTGATA
AACCATAAGCCTTGTCTAAAGAGGATCTGATGGAACAAATGGGGCTGAAG
TCCATTACCGATAGAAAAGTTGTTGCTACATGATTTCATGCAAGAACTCT
ACCAACATTGAAAAGGCTATTGATTGGCCTGTAAAGCATTCAAAAACCAA
AGAGTGAAGTTTCTACCCTCTAGTATAGACACCAATGGGAAGCCTGTTAT
ACAGAACTTGGAATTATGGAAAAATTACAAGGAAGATGAATTGGTAAAGG
CACCGTCGCACCA
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