EY684658

Overview
NameEY684658
Unique NameEY684658
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684658 vs. ExPASy Swiss-Prot
Match: TBA_CANAL (Tubulin alpha chain OS=Candida albicans GN=TUB1 PE=3 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 2.231e-65
Identity = 121/197 (61.42%), Postives = 147/197 (74.62%), Query Frame = 3
Query:   12 AIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQXVDWCPTXFKCGINYQPPTVVPGGDLAKVHRADGMISKSGSGAETLSRIRHPFHLPVATAGF 602
            AIYD+CRR+LDI RP +++LN L++QV+SS+TASLRFDG+LNVD+ EFQTNLVPYPRIHF L SYAPV S  +A HE  SV+EIT S FEP + M KCDPR GKYMA CL+YRGDVV +DV  AVA +K+K+T+Q VDWCPT FK GI YQPPT + G +LA   RA  M+S + + AE   RI   F L  +   F
Sbjct:  209 AIYDMCRRNLDIARPNFSSLNNLIAQVVSSVTASLRFDGSLNVDLNEFQTNLVPYPRIHFPLVSYAPVFSKSRATHEANSVSEITQSCFEPGNQMVKCDPRTGKYMATCLLYRGDVVTRDVQNAVAQVKSKKTVQLVDWCPTGFKIGICYQPPTAIKGSELASASRAVCMLSNTTAIAEAWRRIDRKFDLMYSKRAF 405          
BLAST of EY684658 vs. ExPASy Swiss-Prot
Match: TBA_ASHGO (Tubulin alpha chain OS=Ashbya gossypii GN=TUB1 PE=3 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 2.231e-65
Identity = 118/197 (59.90%), Postives = 146/197 (74.11%), Query Frame = 3
Query:   12 AIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQXVDWCPTXFKCGINYQPPTVVPGGDLAKVHRADGMISKSGSGAETLSRIRHPFHLPVATAGF 602
            AIY++C+++LDI RP++ NLN L++QV+SS+TASLRFDG+LNVD+ EFQTNLVPYPRIHF L SYAP++S  KA HE  SV EITN+ FEP + M KCDPR GKYMA CL+YRGDVV +DV  AVA +K K+T+Q VDWCPT FK GI Y+PPT  P   L+ V RA  M+S + + A+   RI   F L  A   F
Sbjct:  210 AIYEMCKKNLDISRPSFANLNNLIAQVVSSVTASLRFDGSLNVDLNEFQTNLVPYPRIHFPLVSYAPILSKSKAHHESNSVGEITNACFEPGNQMVKCDPRVGKYMATCLLYRGDVVTRDVQTAVAQVKNKKTVQLVDWCPTGFKIGICYEPPTATPNSQLSSVSRAVCMLSNTTAIADAWKRIDRKFDLMYAKRAF 406          
BLAST of EY684658 vs. ExPASy Swiss-Prot
Match: TBAB_SCHCO (Tubulin alpha-1B chain OS=Schizophyllum commune GN=TUB-1B PE=3 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.914e-65
Identity = 119/190 (62.63%), Postives = 150/190 (78.95%), Query Frame = 3
Query:   12 AIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQXVDWCPTXFKCGINYQPPTVVPGGDLAKVHRADGMISKSGSGAETLSRIRHPFHL 581
            AIYDIC+++L + +P +TNLNRL++QV+SS+TASLRFDG+LNVD+ EFQTNLVP+PRIHF L+SYAP++SA +  HEQ SV E+T S FE  + M KCD + GKYMACCL+YRGDVVPKD  AAVA+IKTKRTIQ VDWCPT FK G+  + P  VPGGDLAKV R+  M+S + + A   +R+ + F L
Sbjct:  206 AIYDICKKNLGVAQPGFTNLNRLIAQVVSSITASLRFDGSLNVDLNEFQTNLVPFPRIHFPLASYAPLLSAPRRQHEQNSVEEMTFSCFESGNQMVKCDAKDGKYMACCLLYRGDVVPKDTQAAVASIKTKRTIQFVDWCPTGFKLGVCNEAPATVPGGDLAKVPRSLCMLSNTTAIAAAWNRLDYKFDL 395          
BLAST of EY684658 vs. ExPASy Swiss-Prot
Match: TBA3_YEAST (Tubulin alpha-3 chain OS=Saccharomyces cerevisiae GN=TUB3 PE=1 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 4.970e-65
Identity = 119/197 (60.41%), Postives = 149/197 (75.63%), Query Frame = 3
Query:   12 AIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQXVDWCPTXFKCGINYQPPTVVPGGDLAKVHRADGMISKSGSGAETLSRIRHPFHLPVATAGF 602
            AIYDIC+R+L I RP+++NLN L++QVISS+TASLRFDG+LNVD+ EFQTNLVPYPRIHF L SYAP++S ++A HE  SV+EITN+ FEP + M KCDP  GKYMA CL+YRGDVV +DV  AV  +K K+T+Q VDWCPT FK GI Y+PP+V+P  +LA V RA  M+S + + A+   RI   F L  A   F
Sbjct:  209 AIYDICKRNLGISRPSFSNLNGLIAQVISSVTASLRFDGSLNVDLNEFQTNLVPYPRIHFPLVSYAPILSKKRATHESNSVSEITNACFEPGNQMVKCDPTKGKYMANCLLYRGDVVTRDVQRAVEQVKNKKTVQMVDWCPTGFKIGICYEPPSVIPSSELANVDRAVCMLSNTTAIADAWKRIDQKFDLMYAKRAF 405          
BLAST of EY684658 vs. ExPASy Swiss-Prot
Match: TBA_AJECA (Tubulin alpha chain (Fragment) OS=Ajellomyces capsulata GN=TUB1 PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.309e-62
Identity = 124/198 (62.63%), Postives = 150/198 (75.76%), Query Frame = 3
Query:   12 AIYDICRRSLDIERPTYTNLNRLVSQVISSLTA-SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQXVDWCPTXFKCGINYQPPTVVPGGDLAKVHRADGMISKSGSGAETLSRIRHPFHLPVATAGF 602
            AIYDICRR+L IERP+Y N NRL++Q  S +TA  L FD ALNVD+ EFQTNLVPYPRIHF L+SY+PV+SA KA HE  SV E+T   FEP++ M KCDPR+GKYMA CL+YRGDVVPKDV+A  AT+KTKRT+Q VD  PT FK GI YQPPT+VP GDLAKV+RA  M+S + + +E  + + H F L  +   F
Sbjct:  208 AIYDICRRNLGIERPSYENSNRLMAQGQSPITAIMLLFDCALNVDLNEFQTNLVPYPRIHFPLASYSPVVSAGKASHESNSVMEVTIVCFEPNNQMVKCDPRNGKYMATCLLYRGDVVPKDVHAVAATLKTKRTVQFVDLQPTGFKIGICYQPPTMVPNGDLAKVNRA-CMLSNTTAISEAWTALSHKFDLIYSKRAF 404          
BLAST of EY684658 vs. ExPASy Swiss-Prot
Match: TBA_ENCHE (Tubulin alpha chain (Fragment) OS=Encephalitozoon hellem GN=TUB1 PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 3.938e-62
Identity = 115/197 (58.38%), Postives = 149/197 (75.63%), Query Frame = 3
Query:   12 AIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQXVDWCPTXFKCGINYQPPTVVPGGDLAKVHRADGMISKSGSGAETLSRIRHPFHLPVATAGF 602
            AIYD+CR +L I+RP YT++NR+++QV+SS+TASLRF G+LNVD+TEFQTNLVPYPRIHF L +Y+P++S EKA HE+LSV EITN+ FEP S M +CD R GKYMACCL++RGDV PKD N A A +K KRT Q V+WCPT FK GIN + PTV+ G  +A+V RA   +S + + +E   R+ + F L  +   F
Sbjct:  183 AIYDMCR-NLGIQRPYYTDINRIIAQVVSSITASLRFPGSLNVDLTEFQTNLVPYPRIHFPLVAYSPMLSKEKAAHEKLSVQEITNACFEPQSQMVRCDTRKGKYMACCLLFRGDVNPKDANTATANVKAKRTNQFVEWCPTGFKVGINSRKPTVLDGEAMAEVSRAVCALSNTTAISEAWKRLNNKFDLMFSKRAF 378          
BLAST of EY684658 vs. ExPASy Swiss-Prot
Match: TBA1_NEUCR (Tubulin alpha-A chain OS=Neurospora crassa GN=tba-1 PE=2 SV=3)

HSP 1 Score: 237.269 bits (604), Expect = 8.774e-62
Identity = 115/202 (56.93%), Postives = 147/202 (72.77%), Query Frame = 3
Query:   12 AIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQXVDWCPTXFKCGINYQPPTVVP-----GGDLAKVHRADGMISKSGSGAETLSRIRHPFHLPVATAGF 602
            A+YDICRR+LDI RP+Y +LNRL++QV+SS+T+SLRFDGALNVD+ EFQTNLVP+PR+H+ L SYAPVISA K+ HE    +E+T   FEP++ M  CDPR+GKYMA  L+YRGDVVP+D +AAVA +K K +   V+WCPT FK GIN+Q P  VP      G LA V R+  M+S + + AE  SR+ H F L  +   F
Sbjct:  209 AVYDICRRNLDIPRPSYEHLNRLIAQVVSSITSSLRFDGALNVDLNEFQTNLVPFPRVHYPLISYAPVISATKSAHESFKTSELTLQCFEPNNQMVVCDPRNGKYMAVALLYRGDVVPRDTSAAVAALKAKSSFNLVEWCPTGFKIGINHQKPMSVPTASPADGGLASVDRSVSMLSNTTAIAEAWSRLDHKFDLMYSKRAF 410          
BLAST of EY684658 vs. ExPASy Swiss-Prot
Match: TBA_ENCCU (Tubulin alpha chain OS=Encephalitozoon cuniculi GN=TUB1 PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 5.687e-61
Identity = 113/197 (57.36%), Postives = 149/197 (75.63%), Query Frame = 3
Query:   12 AIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQXVDWCPTXFKCGINYQPPTVVPGGDLAKVHRADGMISKSGSGAETLSRIRHPFHLPVATAGF 602
            AIYD+CR +L I+RP YT++NR+++QV+SS+TASLRF G+LNVD+TEFQTNLVPYPRIHF L +Y+P++S EKA HE+LSV EITN+ FEP + M +CD R GKYMACCL++RGDV PK+ N A A +K KRT Q V+WCPT FK GIN + PTV+ G  +A+V RA   +S + + +E   R+ + F L  +   F
Sbjct:  205 AIYDMCR-NLGIQRPYYTDINRVIAQVVSSITASLRFPGSLNVDLTEFQTNLVPYPRIHFPLVAYSPMLSKEKAAHEKLSVQEITNACFEPQNQMVRCDTRKGKYMACCLLFRGDVNPKEANNATANVKAKRTNQFVEWCPTGFKVGINSRKPTVLDGEAMAEVSRAVCALSNTTAISEAWKRLNNKFDLMFSKRAF 400          
BLAST of EY684658 vs. ExPASy Swiss-Prot
Match: TBA2_EMENI (Tubulin alpha-2 chain OS=Emericella nidulans GN=tubB PE=3 SV=2)

HSP 1 Score: 234.187 bits (596), Expect = 7.427e-61
Identity = 109/197 (55.33%), Postives = 145/197 (73.60%), Query Frame = 3
Query:   12 AIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQXVDWCPTXFKCGINYQPPTVVPGGDLAKVHRADGMISKSGSGAETLSRIRHPFHLPVATAGF 602
            A+YDICRR+LDI RP++ +LNRL++QV+SS+T+SLRFDGALNVD+ EFQTNLVP+PRIH+ L SYAPVIS+ ++ HE   V ++T    EP++ M  CDPR+GKYMA  L+YRGD VP+D   A+A++K K +   V+WCPT FK GINYQ P  VPG +LA V R+  M+S + + +E  SR+ H F L  +   F
Sbjct:  210 AVYDICRRNLDIPRPSFEHLNRLIAQVVSSITSSLRFDGALNVDLNEFQTNLVPFPRIHYPLISYAPVISSNRSSHESFKVQDLTLQCAEPNNQMVVCDPRNGKYMAVALLYRGDCVPRDCTQAIASLKAKASFNLVEWCPTGFKVGINYQKPARVPGSELAPVDRSVSMLSNTTAISEAWSRLDHKFDLMYSKRAF 406          
BLAST of EY684658 vs. ExPASy Swiss-Prot
Match: TBA_DICDI (Tubulin alpha chain OS=Dictyostelium discoideum GN=tubA PE=1 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 8.212e-60
Identity = 110/199 (55.28%), Postives = 144/199 (72.36%), Query Frame = 3
Query:   12 AIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTK--RTIQXVDWCPTXFKCGINYQPPTVVPGGDLAKVHRADGMISKSGSGAETLSRIRHPFHLPVATAGF 602
            AIY+IC+ SLDIE+PTYTNLNRL++QVISSLT+SLRF G LN+D+ + QTNLVP+PR+HF+L SYAPVIS EKA HE ++V  IT++ F   ++MAKC P  GKYMACCLMYRGD+VPK+   AV  I+++  R +  VDW PT FKCGIN Q P      ++A+V ++  M+S + + ++  SRI H F L      F
Sbjct:  215 AIYNICKNSLDIEKPTYTNLNRLIAQVISSLTSSLRFPGQLNLDINDIQTNLVPFPRLHFVLCSYAPVISREKAHHETITVDNITSAVFSEKNIMAKCQPNLGKYMACCLMYRGDIVPKEAQKAVQNIRSEKSRNVSFVDWSPTGFKCGINNQAPVSTKDSEMAEVKKSVCMLSNTTAISQVFSRINHKFDLMFVKRAF 413          
The following BLAST results are available for this feature:
BLAST of EY684658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 412
Match NameE-valueIdentityDescription
TBA_CANAL2.231e-6561.42Tubulin alpha chain OS=Candida albicans GN=TUB1 PE... [more]
TBA_ASHGO2.231e-6559.90Tubulin alpha chain OS=Ashbya gossypii GN=TUB1 PE=... [more]
TBAB_SCHCO2.914e-6562.63Tubulin alpha-1B chain OS=Schizophyllum commune GN... [more]
TBA3_YEAST4.970e-6560.41Tubulin alpha-3 chain OS=Saccharomyces cerevisiae ... [more]
TBA_AJECA2.309e-6262.63Tubulin alpha chain (Fragment) OS=Ajellomyces caps... [more]
TBA_ENCHE3.938e-6258.38Tubulin alpha chain (Fragment) OS=Encephalitozoon ... [more]
TBA1_NEUCR8.774e-6256.93Tubulin alpha-A chain OS=Neurospora crassa GN=tba-... [more]
TBA_ENCCU5.687e-6157.36Tubulin alpha chain OS=Encephalitozoon cuniculi GN... [more]
TBA2_EMENI7.427e-6155.33Tubulin alpha-2 chain OS=Emericella nidulans GN=tu... [more]
TBA_DICDI8.212e-6055.28Tubulin alpha chain OS=Dictyostelium discoideum GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-015-G11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684658 ID=EY684658; Name=EY684658; organism=Citrus sinensis; type=EST; length=869bp
CCACGCGTCCGGCCATCTATGATATCTGCAGGCGCTCTCTTGACATTGAG
CGCCCCACTTACACCAATCTCAACCGACTTGTCTCTCAGGTGATCTCATC
CCTCACTGCCTCTTTGAGGTTTGATGGAGCTCTGAATGTGGATGTGACTG
AGTTCCAGACCAATTTGGTTCCCTATCCAAGGATCCATTTCATGCTCTCC
TCTTATGCCCCAGTTATCTCTGCAGAGAAGGCATTCCATGAGCAACTTTC
AGTTGCTGAGATCACCAACAGTGCTTTTGAGCCATCATCCATGATGGCCA
AATGTGACCCTCGTCATGGCAAGTATATGGCCTGCTGTTTGATGTATCGT
GGTGATGTTGTGCCTAAGGATGTGAATGCAGCTGTGGCCACCATCAAGAC
CAAGCGCACAATTCAGNTTGTTGACTGGTGCCCTACTGNATTCAAGTGTG
GTATCAACTATCAGCCACCAACTGTGGTCCCTGGCGGTGACCTTGCCAAG
GTGCACAGGGCTGACGGCATGATTTCCAAATCCGGCAGCGGGGCGGAGAC
GCTGTCGCGCATAAGACATCCGTTCCACCTACCCGTTGCCACAGCCGGCT
TCCGTGCCACAGACAAGCCGCCCACCCAAACCAAACACCCGACCGGACCC
CCACCACCACCGAAACCCCCCAACCGCACCCACCACGAGGAAGGGGCACG
GGGCGGGACACGGAAAGAGCCGACCATAAAAGACGCGACCGTGCCGAGAC
TGAGCAGCCGCAAGGAGGATCGGTCGGCACGCCGGGTGCGCTGGGTGGAC
AGCCCGGGCGTGGCACAGACGAGAGCGCGCCAGGGCGCCAGTCTGACCAC
CGAGGCGAACAGGAGGAGA
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