EY684658

Overview
NameEY684658
Unique NameEY684658
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684658 vs. ExPASy Swiss-Prot
Match: TBA_EUGGR (Tubulin alpha chain OS=Euglena gracilis GN=TUBA PE=2 SV=1)

HSP 1 Score: 341.273 bits (874), Expect = 4.314e-93
Identity = 166/197 (84.26%), Postives = 179/197 (90.86%), Query Frame = 3
Query:   12 AIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQXVDWCPTXFKCGINYQPPTVVPGGDLAKVHRADGMISKSGSGAETLSRIRHPFHLPVATAGF 602
            AIYDICRR+LDIERPTYTNLNRL++QVISSLTASLRFDGALNVD+TEFQTNLVPYPRIHF+LSSYAP+ISAEKA+HEQLSVAEITN+AFEP+SMMAKCDPRHGKYMACCLMYRGDVVPKDVNA+VATIKTKRTIQ VDWCPT FKCGINYQPPTVVPGGDLAKV RA  MIS S + AE  +RI H F L  +   F
Sbjct:  208 AIYDICRRNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFVLSSYAPIISAEKAYHEQLSVAEITNAAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNASVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIAEVFARIDHKFDLMYSKRAF 404          
BLAST of EY684658 vs. ExPASy Swiss-Prot
Match: TBA_PLAFK (Tubulin alpha chain OS=Plasmodium falciparum (isolate K1 / Thailand) PE=3 SV=1)

HSP 1 Score: 340.502 bits (872), Expect = 7.359e-93
Identity = 168/197 (85.28%), Postives = 178/197 (90.36%), Query Frame = 3
Query:   12 AIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQXVDWCPTXFKCGINYQPPTVVPGGDLAKVHRADGMISKSGSGAETLSRIRHPFHLPVATAGF 602
            AIYDICRR+LDIERPTYTNLNRL++QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPV+SAEKA+HEQLSV+EITNSAFEP++MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQ VDWCPT FKCGINYQPPTVVPGGDLAKV RA  MIS S + AE  SR+   F L  A   F
Sbjct:  208 AIYDICRRNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVVSAEKAYHEQLSVSEITNSAFEPANMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAEVFSRMDQKFDLMYAKRAF 404          
BLAST of EY684658 vs. ExPASy Swiss-Prot
Match: TBA_PLAYO (Tubulin alpha chain OS=Plasmodium yoelii yoelii GN=PY01155 PE=2 SV=2)

HSP 1 Score: 338.191 bits (866), Expect = 3.652e-92
Identity = 166/197 (84.26%), Postives = 178/197 (90.36%), Query Frame = 3
Query:   12 AIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQXVDWCPTXFKCGINYQPPTVVPGGDLAKVHRADGMISKSGSGAETLSRIRHPFHLPVATAGF 602
            AIYDIC+++LDIERPTYTNLNRL++QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPV+SAEKA+HEQLSV+EITNSAFEP++MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQ VDWCPT FKCGINYQPPTVVPGGDLAKV RA  MIS S + AE  SR+   F L  A   F
Sbjct:  208 AIYDICKKNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVVSAEKAYHEQLSVSEITNSAFEPANMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAEVFSRMDQKFDLMYAKRAF 404          
BLAST of EY684658 vs. ExPASy Swiss-Prot
Match: TBA3_ARATH (Tubulin alpha-3/alpha-5 chain OS=Arabidopsis thaliana GN=TUBA3 PE=2 SV=1)

HSP 1 Score: 337.806 bits (865), Expect = 4.770e-92
Identity = 164/197 (83.25%), Postives = 174/197 (88.32%), Query Frame = 3
Query:   12 AIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQXVDWCPTXFKCGINYQPPTVVPGGDLAKVHRADGMISKSGSGAETLSRIRHPFHLPVATAGF 602
            AIYDICRRSLDIERPTYTNLNRL+SQ+ISSLT SLRFDGA+NVD+TEFQTNLVPYPRIHFMLSSYAPVISA KA+HEQLSV EITN+ FEP+SMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV TIKTKRT+Q VDWCPT FKCGINYQPPTVVPGGDLAKV RA  MIS + + AE  SRI H F L  A   F
Sbjct:  208 AIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAF 404          
BLAST of EY684658 vs. ExPASy Swiss-Prot
Match: TBA2_STYLE (Tubulin alpha-2 chain OS=Stylonychia lemnae PE=3 SV=1)

HSP 1 Score: 337.421 bits (864), Expect = 6.229e-92
Identity = 170/197 (86.29%), Postives = 177/197 (89.85%), Query Frame = 3
Query:   12 AIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQXVDWCPTXFKCGINYQPPTVVPGGDLAKVHRADGMISKSGSGAETLSRIRHPFHLPVATAGF 602
            A+YDICRR+LDIERPTYTNLNRL++QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSS APVISAEKA+HEQLSVAEITNSAFEP+SMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQ VDWCPT FKCGINYQPPTVVP GDLAKV RA  MIS S + AE  SRI H F L  A   F
Sbjct:  208 AVYDICRRNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSS-APVISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPSGDLAKVMRAVCMISNSTAIAEVFSRIDHKFDLMYAKRAF 403          
BLAST of EY684658 vs. ExPASy Swiss-Prot
Match: TBA1_PELFA (Tubulin alpha-1 chain OS=Pelvetia fastigiata GN=TUBA1 PE=2 SV=1)

HSP 1 Score: 337.421 bits (864), Expect = 6.229e-92
Identity = 163/197 (82.74%), Postives = 176/197 (89.34%), Query Frame = 3
Query:   12 AIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQXVDWCPTXFKCGINYQPPTVVPGGDLAKVHRADGMISKSGSGAETLSRIRHPFHLPVATAGF 602
            A+YD+CRR+LDIERPTYTNLNRLV+QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML+SYAP+ISAEKA+HEQLSVAEITNS FEP+ MM KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQ VDWCPT FKCGINYQPPT VPGGDLA+V RA  M++ + + AE LSRI H F L  A   F
Sbjct:  208 ALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTAVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAF 404          
BLAST of EY684658 vs. ExPASy Swiss-Prot
Match: TBA2_PELFA (Tubulin alpha-2 chain OS=Pelvetia fastigiata GN=TUBA2 PE=2 SV=1)

HSP 1 Score: 337.035 bits (863), Expect = 8.136e-92
Identity = 163/197 (82.74%), Postives = 176/197 (89.34%), Query Frame = 3
Query:   12 AIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQXVDWCPTXFKCGINYQPPTVVPGGDLAKVHRADGMISKSGSGAETLSRIRHPFHLPVATAGF 602
            A+YD+CRR+LDIERPTYTNLNRLV+QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML+SYAP+ISAEKA+HEQLSVAEITNS FEP+ MM  CDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQ VDWCPT FKCGINYQPPTVVPGGDLA+V RA  M++ + + AE LSRI H F L  A   F
Sbjct:  208 ALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTNCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAF 404          
BLAST of EY684658 vs. ExPASy Swiss-Prot
Match: TBA2_CHLRE (Tubulin alpha-2 chain OS=Chlamydomonas reinhardtii GN=TUBA2 PE=1 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.813e-91
Identity = 165/197 (83.76%), Postives = 175/197 (88.83%), Query Frame = 3
Query:   12 AIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQXVDWCPTXFKCGINYQPPTVVPGGDLAKVHRADGMISKSGSGAETLSRIRHPFHLPVATAGF 602
            AIYDICRRSLDIERPTYTNLNRL++QVISSLTASLRFDGALNVD+TEFQTNLVPYPRIHFMLSSYAP+ISAEKA+HEQLSVAEITN+AFEP+SMM KCDP HGKYMACCLMYRGDVVPKDVNA+VATIKTKRTIQ VDWCPT FKCGINYQPPTVVPG DLAKV RA  MIS S +  E  SR+ H F L  A   F
Sbjct:  208 AIYDICRRSLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNAAFEPASMMVKCDPLHGKYMACCLMYRGDVVPKDVNASVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGVDLAKVQRAVCMISNSTAIGEIFSRLDHKFDLMYAKRAF 404          
BLAST of EY684658 vs. ExPASy Swiss-Prot
Match: TBA2_ANEPH (Tubulin alpha-2 chain (Fragment) OS=Anemia phyllitidis GN=TUBA2 PE=2 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.813e-91
Identity = 168/198 (84.85%), Postives = 175/198 (88.38%), Query Frame = 3
Query:   12 AIYDICRRSL-DIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQXVDWCPTXFKCGINYQPPTVVPGGDLAKVHRADGMISKSGSGAETLSRIRHPFHLPVATAGF 602
            AIYDICRRSL DIERPTYTNLNRLVSQ+ISSLT SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISA KA+HEQLSV EITN+ FEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRT+Q VDWCPT FKCGINYQPP+VVPGGDLAKV RA  MIS + + AE  SRI H F L  A   F
Sbjct:  123 AIYDICRRSLLDIERPTYTNLNRLVSQIISSLTTSLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKLAF 320          
BLAST of EY684658 vs. ExPASy Swiss-Prot
Match: TBA_AVESA (Tubulin alpha chain OS=Avena sativa GN=TUBA PE=2 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 2.367e-91
Identity = 165/197 (83.76%), Postives = 174/197 (88.32%), Query Frame = 3
Query:   12 AIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQXVDWCPTXFKCGINYQPPTVVPGGDLAKVHRADGMISKSGSGAETLSRIRHPFHLPVATAGF 602
            AIYDICRRSLDIERPTYTNLNRL+SQ+ISSLT SLRFDGA+NVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKA+HEQLSV EITN+ FEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV TIKTKRT+Q VD CPT FKCGINYQPP+VVPGGDLAKV RA  MIS + + AE  SRI H F L  A   F
Sbjct:  208 AIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVVTIKTKRTVQFVDXCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAF 404          
The following BLAST results are available for this feature:
BLAST of EY684658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 412
Match NameE-valueIdentityDescription
TBA_EUGGR4.314e-9384.26Tubulin alpha chain OS=Euglena gracilis GN=TUBA PE... [more]
TBA_PLAFK7.359e-9385.28Tubulin alpha chain OS=Plasmodium falciparum (isol... [more]
TBA_PLAYO3.652e-9284.26Tubulin alpha chain OS=Plasmodium yoelii yoelii GN... [more]
TBA3_ARATH4.770e-9283.25Tubulin alpha-3/alpha-5 chain OS=Arabidopsis thali... [more]
TBA2_STYLE6.229e-9286.29Tubulin alpha-2 chain OS=Stylonychia lemnae PE=3 S... [more]
TBA1_PELFA6.229e-9282.74Tubulin alpha-1 chain OS=Pelvetia fastigiata GN=TU... [more]
TBA2_PELFA8.136e-9282.74Tubulin alpha-2 chain OS=Pelvetia fastigiata GN=TU... [more]
TBA2_CHLRE1.813e-9183.76Tubulin alpha-2 chain OS=Chlamydomonas reinhardtii... [more]
TBA2_ANEPH1.813e-9184.85Tubulin alpha-2 chain (Fragment) OS=Anemia phyllit... [more]
TBA_AVESA2.367e-9183.76Tubulin alpha chain OS=Avena sativa GN=TUBA PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-015-G11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684658 ID=EY684658; Name=EY684658; organism=Citrus sinensis; type=EST; length=869bp
CCACGCGTCCGGCCATCTATGATATCTGCAGGCGCTCTCTTGACATTGAG
CGCCCCACTTACACCAATCTCAACCGACTTGTCTCTCAGGTGATCTCATC
CCTCACTGCCTCTTTGAGGTTTGATGGAGCTCTGAATGTGGATGTGACTG
AGTTCCAGACCAATTTGGTTCCCTATCCAAGGATCCATTTCATGCTCTCC
TCTTATGCCCCAGTTATCTCTGCAGAGAAGGCATTCCATGAGCAACTTTC
AGTTGCTGAGATCACCAACAGTGCTTTTGAGCCATCATCCATGATGGCCA
AATGTGACCCTCGTCATGGCAAGTATATGGCCTGCTGTTTGATGTATCGT
GGTGATGTTGTGCCTAAGGATGTGAATGCAGCTGTGGCCACCATCAAGAC
CAAGCGCACAATTCAGNTTGTTGACTGGTGCCCTACTGNATTCAAGTGTG
GTATCAACTATCAGCCACCAACTGTGGTCCCTGGCGGTGACCTTGCCAAG
GTGCACAGGGCTGACGGCATGATTTCCAAATCCGGCAGCGGGGCGGAGAC
GCTGTCGCGCATAAGACATCCGTTCCACCTACCCGTTGCCACAGCCGGCT
TCCGTGCCACAGACAAGCCGCCCACCCAAACCAAACACCCGACCGGACCC
CCACCACCACCGAAACCCCCCAACCGCACCCACCACGAGGAAGGGGCACG
GGGCGGGACACGGAAAGAGCCGACCATAAAAGACGCGACCGTGCCGAGAC
TGAGCAGCCGCAAGGAGGATCGGTCGGCACGCCGGGTGCGCTGGGTGGAC
AGCCCGGGCGTGGCACAGACGAGAGCGCGCCAGGGCGCCAGTCTGACCAC
CGAGGCGAACAGGAGGAGA
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