EY684646

Overview
NameEY684646
Unique NameEY684646
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684646 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.207e-24
Identity = 46/147 (31.29%), Postives = 77/147 (52.38%), Query Frame = 3
Query:  258 FENLFAKRNTPVAHAVGFWDYHSFITAAALYQPHGFGTSAGKLMGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEMSPN--QIYCDDDFKYTYPCTPGVSYHGRGALPLYWNYNYGETGEPLKLIY*TTPNNLKNNATLTF 692
            F+ +   RN     A  F+ Y +F+ AA  +    F T+      ++EVAAFL     +T+ G+  A  GP +WG C+ +E + N    YC    ++  PC  G  Y+GRG + + +NYNYG  G+ +     + P+ + ++AT++F
Sbjct:   88 FDQMLLHRNDAACPAKNFYTYDAFVAAANAFP--SFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQW--PCAAGKKYYGRGPIQISYNYNYGPAGQAIGSNLLSNPDLVASDATVSF 230          

HSP 2 Score: 45.4394 bits (106), Expect = 1.207e-24
Identity = 21/56 (37.50%), Postives = 27/56 (48.21%), Query Frame = 1
Query:  691 FQAAMWKWMTPMXKH*PAAHDPFVGNWKPTKNEPWAKRGLGFGPTMKVLNGGPVVG 858
            F+ A W WMTP     P+ H    G W P  N+  A R  G+G    ++NGG   G
Sbjct:  230 FKTAFWFWMTPQSPK-PSCHAVMTGQWTPNGNDQAAGRVPGYGVVTNIINGGVECG 284          
BLAST of EY684646 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.209e-24
Identity = 46/158 (29.11%), Postives = 73/158 (46.20%), Query Frame = 3
Query:  231 ISDYFQTYQFENLFAKRNTPVAHAVG-FWDYHSFITAAALYQPHGFGTSAGKLMGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEMSPNQIYCDDDFKYTYPCTPGVSYHGRGALPLYWNYNYGETGEPLKLIY*TTPNNLKNNATLTFSGS 701
            I        F+ +   RN         F+ Y++FI AA  +   GFGT+      ++E+AAF      +T+ G+  A  GP AWG C+ +E      YC    +  +PC PG  Y GRG + +  NYNYG  G  + +     P+ +  +  ++F  +
Sbjct:   78 IGSVISNSMFDQMLKHRNDNACQGKNNFYSYNAFINAARSFG--GFGTTGDTTARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSGQ--WPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSA 231          

HSP 2 Score: 49.2914 bits (116), Expect = 1.209e-24
Identity = 21/52 (40.38%), Postives = 31/52 (59.62%), Query Frame = 1
Query:  691 FQAAMWKWMTPMXKH*PAAHDPFVGNWKPTKNEPWAKRGLGFGPTMKVLNGG 846
            F++A+W WMTP     P+ HD  +G W+P+  +  A R  GFG    ++NGG
Sbjct:  228 FKSAIWFWMTPQSPK-PSCHDVIIGRWQPSAADRAANRLPGFGVITNIINGG 278          
BLAST of EY684646 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.844e-23
Identity = 46/146 (31.51%), Postives = 69/146 (47.26%), Query Frame = 3
Query:  255 QFENLFAKRNTPVAHAVGFWDYHSFITAAALYQPHGFGTSAGKLMGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEMSPNQIYCDDDFKYTYPCTPGVSYHGRGALPLYWNYNYGETGEPLKLIY*TTPNNLKNNATLTF 692
            QFE +   R+     A GF+ Y +F+ AA  +    F  +      ++EVAAFL      TS       GGP +WG CY +       +C  + ++  PC PG +YH RG + + +NYNYG  GE +       P  +  + T+ F
Sbjct:  105 QFERMLPHRDDAACPARGFYAYRAFVAAAGAFP--AFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNARW--PCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAF 239          

HSP 2 Score: 45.4394 bits (106), Expect = 2.844e-23
Identity = 20/52 (38.46%), Postives = 26/52 (50.00%), Query Frame = 1
Query:  691 FQAAMWKWMTPMXKH*PAAHDPFVGNWKPTKNEPWAKRGLGFGPTMKVLNGG 846
            F+ A+W WMT      P+ H    G W PT  +  A R  G+G T  +L GG
Sbjct:  239 FKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGG 290          
BLAST of EY684646 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.844e-23
Identity = 46/146 (31.51%), Postives = 69/146 (47.26%), Query Frame = 3
Query:  255 QFENLFAKRNTPVAHAVGFWDYHSFITAAALYQPHGFGTSAGKLMGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEMSPNQIYCDDDFKYTYPCTPGVSYHGRGALPLYWNYNYGETGEPLKLIY*TTPNNLKNNATLTF 692
            QFE +   R+     A GF+ Y +F+ AA  +    F  +      ++EVAAFL      TS       GGP +WG CY +       +C  + ++  PC PG +YH RG + + +NYNYG  GE +       P  +  + T+ F
Sbjct:  105 QFERMLPHRDDAACPARGFYAYRAFVAAAGAFP--AFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNARW--PCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAF 239          

HSP 2 Score: 45.4394 bits (106), Expect = 2.844e-23
Identity = 20/52 (38.46%), Postives = 26/52 (50.00%), Query Frame = 1
Query:  691 FQAAMWKWMTPMXKH*PAAHDPFVGNWKPTKNEPWAKRGLGFGPTMKVLNGG 846
            F+ A+W WMT      P+ H    G W PT  +  A R  G+G T  +L GG
Sbjct:  239 FKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGG 290          
BLAST of EY684646 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 2.847e-23
Identity = 47/148 (31.76%), Postives = 77/148 (52.03%), Query Frame = 3
Query:  258 FENLFAKRNTPVAHAVGFWDYHSFITAAALYQPHGFGTSAGKL-MGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEM--SPNQIYCDDDFKYTYPCTPGVSYHGRGALPLYWNYNYGETGEPLKLIY*TTPNNLKNNATLTF 692
            F+ +   RN     A  F+ Y +F+ AA+ +   GF  + G     ++EVAAFL     +T+ G+  A  GP AWG C+ +E   +    YC    ++  PC  G  Y+GRG + L +N+NYG  G+ +       P+ + ++AT++F
Sbjct:   90 FDQMLLHRNDAACPASNFYTYDAFVAAASAFP--GFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQW--PCAAGKKYYGRGPIQLSYNFNYGPAGQAIGADLLGDPDLVASDATVSF 233          

HSP 2 Score: 42.3578 bits (98), Expect = 2.847e-23
Identity = 19/52 (36.54%), Postives = 26/52 (50.00%), Query Frame = 1
Query:  691 FQAAMWKWMTPMXKH*PAAHDPFVGNWKPTKNEPWAKRGLGFGPTMKVLNGG 846
            F  A W WMTP     P+ H    G W P+ ++  A R  G+G    ++NGG
Sbjct:  233 FDTAFWFWMTPQSPK-PSCHAVATGQWTPSADDQAAGRVPGYGVITNIINGG 283          
BLAST of EY684646 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 2.480e-17
Identity = 45/156 (28.85%), Postives = 72/156 (46.15%), Query Frame = 3
Query:  225 QTISDYFQTYQFENLFAKRNTPVAHAVGFWDYHSFITAAALYQPHGFGTSAGKLMGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEMSPNQIYCDDDFKYTYPCTPGVSYHGRGALPLYWNYNYGETGEPLKLIY*TTPNNLKNNATLTF 692
            Q +     +  F+ +   RN     AV F+ Y +FI AA  +   GFGT+      +KE+AAF G    +T+ G  ++  GP A G C+ +E   NQ+              G  Y+GRG + L    NY   G+ ++      P+ +  +AT++F
Sbjct:   24 QNVGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFP--GFGTTGDDTARKKEIAAFFGQTSHETT-GGTLSPDGPYAGGYCFLRE--GNQM--------------GNGYYGRGPIQLTGQSNYDLAGKAIEQDLVNNPDLVATDATVSF 160          

HSP 2 Score: 46.9802 bits (110), Expect = 2.480e-17
Identity = 20/52 (38.46%), Postives = 28/52 (53.85%), Query Frame = 1
Query:  691 FQAAMWKWMTPMXKH*PAAHDPFVGNWKPTKNEPWAKRGLGFGPTMKVLNGG 846
            F+ A+W WMTP     P+ HD   G W P+  +  A R  G+G    ++NGG
Sbjct:  160 FKTAIWFWMTPQGNK-PSCHDVITGRWTPSAADTSANRVPGYGVITNIINGG 210          
BLAST of EY684646 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 3.422e-16
Identity = 43/145 (29.66%), Postives = 67/145 (46.21%), Query Frame = 3
Query:  258 FENLFAKRNTPVAHAVGFWDYHSFITAAALYQPHGFGTSAGKLMGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEMSPNQIYCDDDFKYTYPCTPGVSYHGRGALPLYWNYNYGETGEPLKLIY*TTPNNLKNNATLTF 692
            F  +   RN     A GF+ Y +FI AA  +   GFGT+      +KE+AAF G    +T+ G  ++  GP A G C+ +E   NQ+              G  ++GRG + L    NY   G+ +       P+ +  +AT++F
Sbjct:   28 FNEMLKNRNDDRCPAKGFYTYDAFIAAANSFP--GFGTTGDDTARKKEIAAFFGQTSHETT-GGSLSADGPFAGGYCFVRE--GNQM--------------GSGFYGRGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSF 153          

HSP 2 Score: 44.2838 bits (103), Expect = 3.422e-16
Identity = 19/52 (36.54%), Postives = 27/52 (51.92%), Query Frame = 1
Query:  691 FQAAMWKWMTPMXKH*PAAHDPFVGNWKPTKNEPWAKRGLGFGPTMKVLNGG 846
            F+ A+W WMT      P+ HD   G W P+  +  A R  G+G    ++NGG
Sbjct:  153 FKTAIWFWMTAQGNK-PSCHDVITGQWTPSAADASANRQPGYGVITNIINGG 203          
BLAST of EY684646 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.648e-15
Identity = 41/145 (28.28%), Postives = 65/145 (44.83%), Query Frame = 3
Query:  258 FENLFAKRNTPVAHAVGFWDYHSFITAAALYQPHGFGTSAGKLMGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEMSPNQIYCDDDFKYTYPCTPGVSYHGRGALPLYWNYNYGETGEPLKLIY*TTPNNLKNNATLTF 692
            FE++ + R         F+ Y +FI AA  +    FGT+      ++E+AAF G    +T+ G+  A  GP AWG C   E++P+                   Y+GRG + L   YNY   G+ L L     P+ + ++  + F
Sbjct:   36 FESMLSHRGDQGCQGA-FYTYDAFIKAAGDFPR--FGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYCRVNEITPSD----------------PPYYGRGPIQLTHKYNYQLAGDALGLDLVNNPDLVSSDPVVAF 161          

HSP 2 Score: 40.4318 bits (93), Expect = 1.648e-15
Identity = 18/56 (32.14%), Postives = 28/56 (50.00%), Query Frame = 1
Query:  691 FQAAMWKWMTPMXKH*PAAHDPFVGNWKPTKNEPWAKRGLGFGPTMKVLNGGPVVG 858
            F+ A+W WMT      P+ HD     W P+ ++  + R  G+G    ++NGG   G
Sbjct:  161 FRTAIWFWMTAQSPK-PSCHDVITNQWTPSGDDRSSGRLPGYGMATNIINGGEECG 215          
BLAST of EY684646 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 2.142e-15
Identity = 39/145 (26.90%), Postives = 62/145 (42.76%), Query Frame = 3
Query:  258 FENLFAKRNTPVAHAVGFWDYHSFITAAALYQPHGFGTSAGKLMGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEMSPNQIYCDDDFKYTYPCTPGVSYHGRGALPLYWNYNYGETGEPLKLIY*TTPNNLKNNATLTF 692
            F  +   RN     A GF+ Y +FI AA  +   GFGTS      +KE+AAF G    +T+   G  +  P   G C+ ++   +                   Y+GRG + L    NY + G  ++      P+ +  +AT++F
Sbjct:   36 FNEMLKNRNDGRCPANGFYTYDAFIAAANSFP--GFGTSGDDTARRKEIAAFFGQTSHETT--GGSLSAEPFTGGYCFVRQNDQSD-----------------RYYGRGPIQLTNQNNYEKAGNAIRQDLVNNPDLVATDATISF 159          

HSP 2 Score: 48.1358 bits (113), Expect = 2.142e-15
Identity = 20/52 (38.46%), Postives = 30/52 (57.69%), Query Frame = 1
Query:  691 FQAAMWKWMTPMXKH*PAAHDPFVGNWKPTKNEPWAKRGLGFGPTMKVLNGG 846
            F+ A+W WMTP     P++HD  +G+W P+  +  A R  G G    ++NGG
Sbjct:  159 FKTAIWFWMTPQDNK-PSSHDVIIGSWTPSAADQSANRAPGCGVITNIINGG 209          
BLAST of EY684646 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 51.6026 bits (122), Expect = 1.341e-14
Identity = 38/145 (26.21%), Postives = 61/145 (42.07%), Query Frame = 3
Query:  258 FENLFAKRNTPVAHAVGFWDYHSFITAAALYQPHGFGTSAGKLMGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEMSPNQIYCDDDFKYTYPCTPGVSYHGRGALPLYWNYNYGETGEPLKLIY*TTPNNLKNNATLTF 692
            F  +   RN     A GF+ Y +FI AA  +   GFGT+      +KE+AAF G    +T+   G  +  P   G C+ ++   +                   Y+GRG + L    NY + G  +       P+ +  +AT++F
Sbjct:   36 FNEMLKNRNDGRCPANGFYTYDAFIAAANSFP--GFGTTGDDTARRKEIAAFFGQTSHETT--GGSLSAEPFTGGYCFVRQNDQSD-----------------RYYGRGPIQLTNRNNYEKAGTAIGQELVNNPDLVATDATISF 159          

HSP 2 Score: 48.521 bits (114), Expect = 1.341e-14
Identity = 20/52 (38.46%), Postives = 30/52 (57.69%), Query Frame = 1
Query:  691 FQAAMWKWMTPMXKH*PAAHDPFVGNWKPTKNEPWAKRGLGFGPTMKVLNGG 846
            F+ A+W WMTP     P++HD  +G W P+  +  A R  G+G    ++NGG
Sbjct:  159 FKTAIWFWMTPQDNK-PSSHDVIIGRWTPSAADQAANRVPGYGVITNIINGG 209          
The following BLAST results are available for this feature:
BLAST of EY684646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
CHI1_ORYSJ1.207e-2431.29Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI4_SOLTU1.209e-2429.11Endochitinase 4 (Fragment) OS=Solanum tuberosum GN... [more]
CHI7_ORYSJ2.844e-2331.51Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI7_ORYSI2.844e-2331.51Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 ... [more]
CHI12_ORYSJ2.847e-2331.76Chitinase 12 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHIT_PETHY2.480e-1728.85Acidic endochitinase OS=Petunia hybrida PE=2 SV=1[more]
CHIB_SOLLC3.422e-1629.66Acidic 27 kDa endochitinase OS=Solanum lycopersicu... [more]
CHI11_ORYSJ1.648e-1528.28Chitinase 11 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHIP_TOBAC2.142e-1526.90Acidic endochitinase P OS=Nicotiana tabacum PE=1 S... [more]
CHIQ_TOBAC1.341e-1426.21Acidic endochitinase Q OS=Nicotiana tabacum PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-015-F08-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684646 ID=EY684646; Name=EY684646; organism=Citrus sinensis; type=EST; length=859bp
CCACGCGTCCGAATTTCTAAACGTAGCTCATTTAATTTCCTCCCATTCAT
TTAGCTATGAAGCTCAAATGGCAGCTAGTACTTTTTGCAACGGCAATTTT
ATCAGTGCTAGTCATTGTGCATGGCGATGAATCTTCAGTGAAGCCATTAG
TGAAGATTGTGAAGGGCAAGAAATTGTGTGACAAAGGGTGGGAGTGTAAA
GGATGGTCTGAGTATTGCTGCAATCAAACGATATCGGATTACTTTCAGAC
TTACCAATTTGAGAACCTTTTTGCAAAGCGTAACACCCCTGTGGCTCATG
CTGTTGGGTTTTGGGACTACCATTCTTTTATAACCGCTGCTGCTTTATAT
CAGCCTCATGGGTTTGGTACCAGTGCAGGAAAGCTCATGGGTCAAAAGGA
AGTTGCTGCTTTTCTTGGCCACGTTGGAAGCAAAACCTCGTGTGGGTATG
GAGTGGCAACTGGTGGACCATTGGCTTGGGGTCTATGCTACAACAAGGAG
ATGAGTCCTAACCAGATATACTGCGATGATGACTTCAAATACACATATCC
TTGCACTCCTGGAGTTTCATATCATGGCCGCGGTGCCTTGCCCCTCTACT
GGAACTACAACTATGGGGAAACAGGAGAGCCCCTAAAGTTGATATATTGA
ACCACCCCGAATAACTTAAAAAACAATGCGACCCTAACCTTTTCAGGCAG
CAATGTGGAAGTGGATGACTCCAATGAANAAACATTAGCCCGCGGCGCAC
GACCCGTTCGTTGGTAACTGGAAACCTACCAAGAATGAACCTTGGGCCAA
AAGGGGGCTTGGATTCGGCCCAACCATGAAGGTCCTGAATGGGGGACCAG
TTGTGGGCA
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