EY684638

Overview
NameEY684638
Unique NameEY684638
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_BACAC (Indole-3-glycerol phosphate synthase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=trpC PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.554e-15
Identity = 51/126 (40.48%), Postives = 73/126 (57.94%), Query Frame = 1 
Query:    7 QIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXV-ITESGIVNRADVELMEISGVYSFLVGETFMRAEN 381
            QI  A   GAD +LLIV+AL   K+ EL +     GL+ +VEVHD  ELE A++ L+  ++G+NNRNL TFEV L  T            + I+ESGI ++ D+  ++ +G    LVGE  M + +
Sbjct:  117 QIDRAYEAGADIILLIVAALTKEKLKELYSYVLEKGLEAIVEVHDEQELEIAIQ-LNPHVIGINNRNLKTFEVDLSQTEKLGKRLNEEKLLWISESGIHSKEDIIRVKRAGAKGVLVGEALMTSSS 241
[Close]
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_BACAA (Indole-3-glycerol phosphate synthase OS=Bacillus anthracis (strain A0248) GN=trpC PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.554e-15
Identity = 51/126 (40.48%), Postives = 73/126 (57.94%), Query Frame = 1 
Query:    7 QIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXV-ITESGIVNRADVELMEISGVYSFLVGETFMRAEN 381
            QI  A   GAD +LLIV+AL   K+ EL +     GL+ +VEVHD  ELE A++ L+  ++G+NNRNL TFEV L  T            + I+ESGI ++ D+  ++ +G    LVGE  M + +
Sbjct:  117 QIDRAYEAGADIILLIVAALTKEKLKELYSYVLEKGLEAIVEVHDEQELEIAIQ-LNPHVIGINNRNLKTFEVDLSQTEKLGKRLNEEKLLWISESGIHSKEDIIRVKRAGAKGVLVGEALMTSSS 241
[Close]
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_STRZT (Indole-3-glycerol phosphate synthase OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=trpC PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.947e-15
Identity = 54/135 (40.00%), Postives = 75/135 (55.56%), Query Frame = 1 
Query:    7 QIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELME--ISGVYSFLVGETFMRAENPGAELQRL 405
            QI+ AR  GA  +LLIV+AL + ++ EL   A  +GL+VLVE H+  ELE A + L   ++GVNNRNL TFEV L+ +             I+ES I    D E +    +G+   LVG   M+AEN    ++ L
Sbjct:  120 QIIRARNAGATVILLIVAALSEERLKELYDYATELGLEVLVETHNLAELEVAHR-LGAEIIGVNNRNLTTFEVDLQTSVDLAPYFEEGRYYISESAIFTGQDAERLAPYFNGI---LVGTALMQAENVAQRIKEL 250
[Close]
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_STRZP (Indole-3-glycerol phosphate synthase OS=Streptococcus pneumoniae (strain P1031) GN=trpC PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.947e-15
Identity = 54/135 (40.00%), Postives = 75/135 (55.56%), Query Frame = 1 
Query:    7 QIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELME--ISGVYSFLVGETFMRAENPGAELQRL 405
            QI+ AR  GA  +LLIV+AL + ++ EL   A  +GL+VLVE H+  ELE A + L   ++GVNNRNL TFEV L+ +             I+ES I    D E +    +G+   LVG   M+AEN    ++ L
Sbjct:  120 QIIRARNAGATVILLIVAALSEERLKELYDYATELGLEVLVETHNLAELEVAHR-LGAEIIGVNNRNLTTFEVDLQTSVDLAPYFEEGRYYISESAIFTGQDAERLAPYFNGI---LVGTALMQAENVAQRIKEL 250
[Close]
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_STRPS (Indole-3-glycerol phosphate synthase OS=Streptococcus pneumoniae (strain CGSP14) GN=trpC PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.947e-15
Identity = 54/135 (40.00%), Postives = 75/135 (55.56%), Query Frame = 1 
Query:    7 QIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELME--ISGVYSFLVGETFMRAENPGAELQRL 405
            QI+ AR  GA  +LLIV+AL + ++ EL   A  +GL+VLVE H+  ELE A + L   ++GVNNRNL TFEV L+ +             I+ES I    D E +    +G+   LVG   M+AEN    ++ L
Sbjct:  120 QIIRARNAGATVILLIVAALSEERLKELYDYATELGLEVLVETHNLAELEVAHR-LGAEIIGVNNRNLTTFEVDLQTSVDLAPYFEEGRYYISESAIFTGQDAERLAPYFNGI---LVGTALMQAENVAQRIKEL 250
[Close]
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_STRPN (Indole-3-glycerol phosphate synthase OS=Streptococcus pneumoniae GN=trpC PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.947e-15
Identity = 54/135 (40.00%), Postives = 75/135 (55.56%), Query Frame = 1 
Query:    7 QIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELME--ISGVYSFLVGETFMRAENPGAELQRL 405
            QI+ AR  GA  +LLIV+AL + ++ EL   A  +GL+VLVE H+  ELE A + L   ++GVNNRNL TFEV L+ +             I+ES I    D E +    +G+   LVG   M+AEN    ++ L
Sbjct:  120 QIIRARNAGATVILLIVAALSEERLKELYDYATELGLEVLVETHNLAELEVAHR-LGAEIIGVNNRNLTTFEVDLQTSVDLAPYFEEGRYYISESAIFTGQDAERLAPYFNGI---LVGTALMQAENVAQRIKEL 250
[Close]
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_STRPJ (Indole-3-glycerol phosphate synthase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=trpC PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.947e-15
Identity = 54/135 (40.00%), Postives = 75/135 (55.56%), Query Frame = 1 
Query:    7 QIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELME--ISGVYSFLVGETFMRAENPGAELQRL 405
            QI+ AR  GA  +LLIV+AL + ++ EL   A  +GL+VLVE H+  ELE A + L   ++GVNNRNL TFEV L+ +             I+ES I    D E +    +G+   LVG   M+AEN    ++ L
Sbjct:  120 QIIRARNAGATVILLIVAALSEERLKELYDYATELGLEVLVETHNLAELEVAHR-LGAEIIGVNNRNLTTFEVDLQTSVDLAPYFEEGRYYISESAIFTGQDAERLAPYFNGI---LVGTALMQAENVAQRIKEL 250
[Close]
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_STRPI (Indole-3-glycerol phosphate synthase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=trpC PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.947e-15
Identity = 55/135 (40.74%), Postives = 76/135 (56.30%), Query Frame = 1 
Query:    7 QIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELME--ISGVYSFLVGETFMRAENPGAELQRL 405
            QI+ AR  GA  +LLIV+AL + ++ EL   A  +GL+VLVE H+  ELE A + L   ++GVNNRNL TFEV L+ +             I+ES I  R D E +    +G+   LVG   M+AEN    ++ L
Sbjct:  120 QIIRARNAGATVILLIVAALAEERLKELYDYATVLGLEVLVETHNLAELEVAHR-LGAQIIGVNNRNLTTFEVDLQTSVDLAKHFKDDCLYISESAIFTRQDAERLAPYFNGI---LVGTALMQAENVVQRIKEL 250
[Close]
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_STRP4 (Indole-3-glycerol phosphate synthase OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=trpC PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.947e-15
Identity = 54/135 (40.00%), Postives = 75/135 (55.56%), Query Frame = 1 
Query:    7 QIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELME--ISGVYSFLVGETFMRAENPGAELQRL 405
            QI+ AR  GA  +LLIV+AL + ++ EL   A  +GL+VLVE H+  ELE A + L   ++GVNNRNL TFEV L+ +             I+ES I    D E +    +G+   LVG   M+AEN    ++ L
Sbjct:  120 QIIRARNAGATVILLIVAALSEERLKELYDYATELGLEVLVETHNLAELEVAHR-LGAEIIGVNNRNLTTFEVDLQTSVDLAPYFEEGRYYISESAIFTGQDAERLAPYFNGI---LVGTALMQAENVAQRIKEL 250
[Close]
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_PROVI (Indole-3-glycerol phosphate synthase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=trpC PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.947e-15
Identity = 50/136 (36.76%), Postives = 76/136 (55.88%), Query Frame = 1 
Query:    7 QIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLFFP 414
            QI E+R +GAD +LLIV+AL+  ++ +   +A  +GLDVLVEVHD  EL  A+++    +VGVNNRNL  F V    +             ++ESG+    D+ L+  +G  + L+GE         +EL+ L +P
Sbjct:  126 QIFESRIMGADAILLIVAALEPSELHDYLQMAGEIGLDVLVEVHDRHELALAIES-GAEVVGVNNRNLKDFSVDPATSASLRPYFPSGVIAVSESGLKTADDIALVRDAGFDAVLIGEGL----QVSSELRSLSWP 256
The following BLAST results are available for this feature:
BLAST of EY684638 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 383
Match NameE-valueIdentityDescription
TRPC_BACAC4.554e-1540.48Indole-3-glycerol phosphate synthase OS=Bacillus a... [more]
TRPC_BACAA4.554e-1540.48Indole-3-glycerol phosphate synthase OS=Bacillus a... [more]
TRPC_STRZT5.947e-1540.00Indole-3-glycerol phosphate synthase OS=Streptococ... [more]
TRPC_STRZP5.947e-1540.00Indole-3-glycerol phosphate synthase OS=Streptococ... [more]
TRPC_STRPS5.947e-1540.00Indole-3-glycerol phosphate synthase OS=Streptococ... [more]
TRPC_STRPN5.947e-1540.00Indole-3-glycerol phosphate synthase OS=Streptococ... [more]
TRPC_STRPJ5.947e-1540.00Indole-3-glycerol phosphate synthase OS=Streptococ... [more]
TRPC_STRPI5.947e-1540.74Indole-3-glycerol phosphate synthase OS=Streptococ... [more]
TRPC_STRP45.947e-1540.00Indole-3-glycerol phosphate synthase OS=Streptococ... [more]
TRPC_PROVI5.947e-1536.76Indole-3-glycerol phosphate synthase OS=Prosthecoc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-015-E11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684638 ID=EY684638; Name=EY684638; organism=Citrus sinensis; type=EST; length=851bp
CCCTACCAGATCGTCGAAGCTCGTGCCTTGGGCGCCGATTGCGTGCTGTT
GATCGTCTCCGCACTGGATGACGTGAAGATGGCCGAACTGGCGGCCGTGG
CCAAAAGCGTCGGCCTCGACGTGCTGGTGGAAGTGCACGACGGTGATGAA
CTGGAACGCGCGTTGAAAACCCTCGACACACCGTTGGTGGGCGTCAACAA
CCGCAACCTGCACACGTTTGAAGTCAGCCTGGAAAACACCCTCGACCTGT
TGCCGCGTATCCCGCGTGACCGGTTGGTGATTACCGAAAGTGGCATCGTC
AATCGCGCCGATGTCGAACTGATGGAAATCAGCGGCGTGTACTCGTTCCT
CGTCGGCGAAACCTTCATGCGTGCCGAGAACCCGGGGGCTGAATTGCAGC
GCCTGTTCTTCCCGGAGCGTGGCGTTGCTGTCAGCGGTTCGACCCTGGAT
TGATGATGACCCAGCCGGTGGCGATGACGGTCGAGGCAGGCCTTAAGGCC
GAGCAGGATTTGCTCGCCGCTGTCTGCGCGGGGGAGCAGCCGTTCGGCCT
GCTGTTCTGGCAGCCCAGCGATCCAACGTTGGTGATGCCTCCGCGTTTGA
GCCGACTTCCGGCATTCGAGACGCGCAGTCAGGTATCCGGCACGAGGCCG
GTTGCCCGGGGCTGCGTGCGGGAAGACGGCGGTGGACTGGGACCGGCACG
AAGAGGCGACGGACGAACCGTCCCTGGCGGGAGCGCAAGCAGCGGGGAGG
GCGTGAGCGAGGGGGGTCGCGAGCGGAGAGGGAGGGTTGTAAACGTGCAT
CCGGCGGCCCGCAACCCAACGGGGGAGCCGCCCCACCGGCCGCATGGGGG
G
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