EY684638
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_ECOLI (Tryptophan biosynthesis protein trpCF OS=Escherichia coli (strain K12) GN=trpC PE=1 SV=3) HSP 1 Score: 79.337 bits (194), Expect = 2.952e-14 Identity = 55/143 (38.46%), Postives = 76/143 (53.15%), Query Frame = 1 Query: 1 PYQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADV-ELMEISGVYSFLVGETFMRAENPGAELQRLFFPERGV 426 PYQI AR AD LL++S LDD + +LAAVA S+ + VL EV + +E ERA+ L +VG+NNR+L + L T VI+ESGI A V EL + FL+G M ++ A ++R+ E V Sbjct: 120 PYQIYLARYYQADACLLMLSVLDDDQYRQLAAVAHSLEMGVLTEVSNEEEQERAI-ALGAKVVGINNRDLRDLSIDLNRTRELAPKLGHNVTVISESGINTYAQVRELSHFAN--GFLIGSALMAHDDLHAAVRRVLLGENKV 259
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_CHLL2 (Indole-3-glycerol phosphate synthase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=trpC PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.952e-14 Identity = 44/118 (37.29%), Postives = 68/118 (57.63%), Query Frame = 1 Query: 7 QIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGE 360 QI E+R +GAD +LLIV+AL+ ++ + +A +GL VLVEVHD EL+ A + ++GVNNRNL F VSL+ + ESG+ + D++ + + + L+GE Sbjct: 126 QIFESRLIGADAILLIVAALEASQLRDYLQLAAEIGLAVLVEVHDRQELDTAAEA-GAGIIGVNNRNLKDFSVSLDTAIDLRPHFPEGVIAVAESGLKSADDIQRIGQASFDAVLIGE 242
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_BACCQ (Indole-3-glycerol phosphate synthase OS=Bacillus cereus (strain Q1) GN=trpC PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.952e-14 Identity = 49/126 (38.89%), Postives = 72/126 (57.14%), Query Frame = 1 Query: 7 QIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXV-ITESGIVNRADVELMEISGVYSFLVGETFMRAEN 381 QI A GAD +LLIV+AL K+ EL + GL+ +VEVHD ELE A++ + ++G+NNRNL TFEV L T + I+ESG+ ++ D+ ++ +G LVGE M + + Sbjct: 117 QIDRAYEAGADIILLIVAALTKEKLKELYSYVLEKGLEAIVEVHDEQELEIAIQ-FNPHVIGINNRNLKTFEVDLSQTEKLGKRLNEEKLLWISESGVHSKEDMIRVKRAGAKGVLVGEALMTSSS 241
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_BACC7 (Indole-3-glycerol phosphate synthase OS=Bacillus cereus (strain AH187) GN=trpC PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.952e-14 Identity = 49/126 (38.89%), Postives = 72/126 (57.14%), Query Frame = 1 Query: 7 QIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXV-ITESGIVNRADVELMEISGVYSFLVGETFMRAEN 381 QI A GAD +LLIV+AL K+ EL + GL+ +VEVHD ELE A++ + ++G+NNRNL TFEV L T + I+ESG+ ++ D+ ++ +G LVGE M + + Sbjct: 117 QIDRAYEAGADIILLIVAALTKEKLKELYSYVLEKGLEAIVEVHDEQELEIAIQ-FNPHVIGINNRNLKTFEVDLSQTEKLGKRLNEEKLLWISESGVHSKEDMIRVKRAGAKGVLVGEALMTSSS 241
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_STRGC (Indole-3-glycerol phosphate synthase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=trpC PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.855e-14 Identity = 49/133 (36.84%), Postives = 75/133 (56.39%), Query Frame = 1 Query: 7 QIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRL 405 QIV AR GA +LLIV+AL + ++ EL A +GL+VLVE H+ ELE A + + ++GVNNRNL TFE + + ++ES I ++ D E + ++ LVG M+AE+ +++ L Sbjct: 120 QIVRARNAGATIILLIVAALSEKRLQELYDFATGLGLEVLVETHNLAELETAHR-IGARIIGVNNRNLVTFETDINTSLQLSAHFKDDRVYVSESAIFSKEDAEQV-APYFHAILVGTALMQAEDVAEKIKEL 250
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_CORGL (Tryptophan biosynthesis protein trpCF OS=Corynebacterium glutamicum GN=trpC PE=3 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 3.855e-14 Identity = 51/139 (36.69%), Postives = 73/139 (52.52%), Query Frame = 1 Query: 1 PYQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYS--FLVGETFMRAENPGAELQRLFF 411 P Q+ AR GAD +LL++S LDD + A LAA A LD+L EV D +E+ RA+K L + GVN+RNLH + L+ + +++ESG+ D E + G +S FLVG EN + L + Sbjct: 126 PVQVHAARYFGADAILLMLSVLDDEEYAALAAEAARFDLDILTEVIDEEEVARAIK-LGAKIFGVNHRNLHDLSIDLDRSRRLSKLIPADAVLVSESGV---RDTETVRQLGGHSNAFLVGSQLTSQENVDLAARELVY 260
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_BEUC1 (Indole-3-glycerol phosphate synthase OS=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) GN=trpC PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.855e-14 Identity = 49/128 (38.28%), Postives = 65/128 (50.78%), Query Frame = 1 Query: 1 PYQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENP 384 PYQ+ EARA GAD VLLIV+AL+ + L S+G+ LVE HD E RA+ ++G+N RNLHT EV + ESG+ DV +G + LVGE+ + NP Sbjct: 123 PYQVWEARAHGADLVLLIVAALEQTVLTSLVERVHSLGMTALVEAHDVGEAHRAIDA-GARVLGINARNLHTLEVDRATFAEVVGVVPDGVVKVAESGVRGPHDVLEYARAGADAVLVGESLVTQGNP 249
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_STRMU (Indole-3-glycerol phosphate synthase OS=Streptococcus mutans GN=trpC PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.035e-14 Identity = 51/133 (38.35%), Postives = 75/133 (56.39%), Query Frame = 1 Query: 7 QIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRL 405 QIV +R GA +LLIV+AL + ++ EL A +GL+VLVE H+ ELE A + + ++GVNNRNL TFEV + + I+ESGI D +L+ + LVG M+A+N +++ L Sbjct: 120 QIVRSRNAGATVILLIVAALPEKRLKELYDFAAGLGLEVLVETHNLSELEIAHR-IGAQIIGVNNRNLVTFEVDINTSLELSTHFRDDKVYISESGIFTGQDSKLV-APYFNAILVGTALMQADNVADKVKEL 250
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_BUCAP (Tryptophan biosynthesis protein trpCF OS=Buchnera aphidicola subsp. Schizaphis graminum GN=trpC PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.035e-14 Identity = 47/142 (33.10%), Postives = 81/142 (57.04%), Query Frame = 1 Query: 4 YQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISG-VYSFLVGETFMRAENPGAELQRLFFPERGV 426 YQ+ AR AD +LL++S L+D + EL+ +AK + + VL E+++ EL+RA+K L+ ++G+NNRNLH + L T +++ESGI + + ++ E+S V+ FL+G + M N ++ L + V Sbjct: 122 YQVYLARYYSADAILLMLSVLNDSQYLELSRIAKELNMGVLTEINNIKELKRAIK-LNASVIGINNRNLHDLSIDLNRT-RTLSPLIKNKIIVSESGI--KKNHQIKELSNIVHGFLIGSSLMYRTNLETNIKSLIIGDNKV 259
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_SULTO (Indole-3-glycerol phosphate synthase OS=Sulfolobus tokodaii GN=trpC PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.576e-14 Identity = 49/130 (37.69%), Postives = 73/130 (56.15%), Query Frame = 1 Query: 7 QIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAEL 396 QI A LGAD +LLIV L + ++ L A+++GL+ +VEV D ++L+ AL D ++GVN RNL + EV++ N I ESGI N+ D+ ++ G +FL+G T M+ N EL Sbjct: 117 QIDTAFNLGADAILLIVKILTERELINLYEYARNLGLEAIVEVTDENDLKIALM-YDFNIIGVNARNLSSLEVNIRNARKILEMIPNDRIKIAESGIKNKEDIIELKKYGADAFLIGTTLMKDPNKIKEL 245 The following BLAST results are available for this feature:
BLAST of EY684638 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 383
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684638 ID=EY684638; Name=EY684638; organism=Citrus sinensis; type=EST; length=851bpback to top |