EY684638
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_ACISJ (Indole-3-glycerol phosphate synthase OS=Acidovorax sp. (strain JS42) GN=trpC PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.664e-33 Identity = 76/136 (55.88%), Postives = 95/136 (69.85%), Query Frame = 1 Query: 1 PYQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLF 408 PYQI E+RA GADCVLLI + L+D MAE+ +A+S+ + VLVEVHDG ELERAL+ L TPLVG+NNRNL TFEVSL+ T ++ ESGI+ DV + +GV +FLVGE FMRA +PG L +LF Sbjct: 131 PYQIYESRAFGADCVLLIAACLEDGLMAEMEQIARSLDMAVLVEVHDGAELERALR-LQTPLVGINNRNLRTFEVSLQTTLDLKKEVPADRLLVAESGILAPVDVHTLRDAGVNAFLVGEAFMRAPDPGRALAQLF 265
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_ACIAC (Indole-3-glycerol phosphate synthase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=trpC PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.174e-33 Identity = 74/135 (54.81%), Postives = 96/135 (71.11%), Query Frame = 1 Query: 4 YQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLF 408 YQI E+RA+GAD +LLI + L+D +MAE A+A S+G+ LVEVHDG EL+RALK L TPLVG+NNRNL TFEVSL+ T ++ ESGI+ DV+ + + V++FLVGE FMRA+ PGA L +LF Sbjct: 132 YQIYESRAMGADAILLIAACLEDAQMAEFEAIAHSLGMAALVEVHDGAELDRALK-LRTPLVGINNRNLRTFEVSLDTTVSLRKAVPSDRLLVAESGILTPQDVKTLRDADVHAFLVGEAFMRAQEPGAALAKLF 265
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_DIAST (Indole-3-glycerol phosphate synthase OS=Diaphorobacter sp. (strain TPSY) GN=trpC PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.839e-33 Identity = 76/136 (55.88%), Postives = 95/136 (69.85%), Query Frame = 1 Query: 1 PYQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLF 408 PYQI E+RA+GADCVLLI + L+D MAE+ A+S+ + VLVEVHDG ELERAL+ L TPLVG+NNRNL TFEVSL+ T ++ ESGI+ DV + +GV +FLVGE FMRA +PG L +LF Sbjct: 131 PYQIYESRAMGADCVLLIAACLEDGLMAEMEQFARSLDMAVLVEVHDGAELERALR-LQTPLVGINNRNLRTFEVSLQTTLDLKKEVPADRLLVAESGILAPVDVHTLRDAGVNAFLVGEAFMRAPDPGRALAQLF 265
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_VEREI (Indole-3-glycerol phosphate synthase OS=Verminephrobacter eiseniae (strain EF01-2) GN=trpC PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.843e-33 Identity = 72/136 (52.94%), Postives = 93/136 (68.38%), Query Frame = 1 Query: 1 PYQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLF 408 PYQ+ EARA+GAD +LLI + LDD ++A+ A+A+S+ + VL+EVHD ELERAL TPLVG+NNRNL +FEVSL T +TESGI+ DV+ + +GV +FLVGE FMRA +PG L RLF Sbjct: 131 PYQVYEARAMGADAILLIAACLDDAQLADFEAIARSLDMAVLLEVHDRPELERALARCKTPLVGINNRNLRSFEVSLSTTLDMLADMPPERLPVTESGILTPQDVKTLRDAGVQAFLVGEAFMRAADPGLALARLF 266
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_THIDA (Indole-3-glycerol phosphate synthase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=trpC PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.843e-33 Identity = 78/135 (57.78%), Postives = 94/135 (69.63%), Query Frame = 1 Query: 4 YQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLF 408 YQ+ EARA+GADC+LLIV+AL+ M L A+A +G+ VLVE HD EL+ AL TL TPL G+NNRNL TFEVSL+ T V+TESGI+ ADV+ M GV +FLVGE FMRA +PGAEL RLF Sbjct: 128 YQVYEARAMGADCILLIVAALELPAMQALEALANELGMAVLVESHDAAELDAAL-TLRTPLQGINNRNLRTFEVSLDTTLSLLPKIGPERIVVTESGILAPADVDTMRSRGVNTFLVGEAFMRAADPGAELARLF 261
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_HERAR (Indole-3-glycerol phosphate synthase OS=Herminiimonas arsenicoxydans GN=trpC PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.843e-33 Identity = 78/136 (57.35%), Postives = 94/136 (69.12%), Query Frame = 1 Query: 1 PYQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLF 408 PYQI EAR+ GADC+LLIV+ LD MAEL A A +G+ VLVEVH+G+EL AL+ L T L+GVNNRNL TFE SL+ T VITES IV DV+ M + V++FL+GETFMRA +PG EL RLF Sbjct: 131 PYQIYEARSWGADCILLIVAGLDHGLMAELEACAHELGMHVLVEVHNGEELNAALR-LKTTLLGVNNRNLRTFETSLQTTLDLLPRIPPEKLVITESAIVTPDDVKKMRDADVHAFLIGETFMRAPDPGQELNRLF 265
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_VARPS (Indole-3-glycerol phosphate synthase OS=Variovorax paradoxus (strain S110) GN=trpC PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 8.260e-33 Identity = 73/135 (54.07%), Postives = 92/135 (68.15%), Query Frame = 1 Query: 4 YQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLF 408 YQ+ E+RA+GAD VLLI + LDD +M + A+A+ +G+ VLVEVHD ELERALK L TPL+GVNNRNL FEVS++ T +TESGI R DV + +GV++FLVGE FMRA+ PG L LF Sbjct: 132 YQVYESRAMGADAVLLIAACLDDAQMKDYEAIARGLGMAVLVEVHDAAELERALK-LKTPLIGVNNRNLRNFEVSIQATIDLLPRLPADRLAVTESGIATREDVATLRAAGVHAFLVGEAFMRAKEPGEALAALF 265
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_POLNS (Indole-3-glycerol phosphate synthase OS=Polynucleobacter necessarius (strain STIR1) GN=trpC PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 8.260e-33 Identity = 75/136 (55.15%), Postives = 97/136 (71.32%), Query Frame = 1 Query: 1 PYQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLF 408 PYQ+ EARA+GAD +LLIV+ L+ +M +L A A +GLDVLVEVH+ ELE+AL+ L TPL+G+NNRNL TFEV+L+NT ++TESGI++ DV+LM V +FLVGE FMRA +PGA L LF Sbjct: 132 PYQVYEARAIGADAILLIVAYLELNQMKDLEACANELGLDVLVEVHNASELEQALE-LKTPLLGINNRNLKTFEVTLQNTLSLLSMVPNDKTLVTESGILSHTDVQLMRDHHVNAFLVGEAFMRAADPGAALSELF 266
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_LEPCP (Indole-3-glycerol phosphate synthase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=trpC PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 8.260e-33 Identity = 74/135 (54.81%), Postives = 96/135 (71.11%), Query Frame = 1 Query: 4 YQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLF 408 YQ+ EARA+GAD +LLI + LDD +MA+L AVA + + VLVEVHD DEL+RAL+ L TPL+G+NNRNL TFEV+L+ T ++TESGI+ R DV+ M + V++FLVGE FMRA +PG L LF Sbjct: 128 YQVHEARAMGADAILLIAACLDDAQMADLEAVALAHRMSVLVEVHDRDELQRALR-LKTPLLGINNRNLRTFEVTLDTTLGMLGEVPSDRLLVTESGILGRDDVQRMRAAQVHAFLVGEAFMRASDPGVALAALF 261
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_BORPA (Indole-3-glycerol phosphate synthase OS=Bordetella parapertussis GN=trpC PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.409e-32 Identity = 74/135 (54.81%), Postives = 92/135 (68.15%), Query Frame = 1 Query: 1 PYQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRL 405 PYQI+ ARA+GADCVLLIV+AL ++ +L +A +G+DVLVEVHD EL+ AL L TPL+G+NNRNL TFE +L+ T V+TESGI+ DV LM V +FLVGE FMRA +PG EL RL Sbjct: 127 PYQIISARAMGADCVLLIVAALAPAQLRDLETLAIDLGMDVLVEVHDAKELDAAL-ALRTPLIGINNRNLRTFETTLQTTLDLLPMIPAGKRVVTESGILKPEDVRLMREHDVQAFLVGEAFMRANDPGVELARL 260 The following BLAST results are available for this feature:
BLAST of EY684638 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 383
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684638 ID=EY684638; Name=EY684638; organism=Citrus sinensis; type=EST; length=851bpback to top |