EY684638

Overview
NameEY684638
Unique NameEY684638
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_ACIF2 (Indole-3-glycerol phosphate synthase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=trpC PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.010e-30
Identity = 72/137 (52.55%), Postives = 91/137 (66.42%), Query Frame = 1
Query:    1 PYQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLFF 411
            PYQ+ EARA+GAD +LLIV+AL D ++  L A A+S+ L VLVEVHD  EL+RALK L TPL+G+NNR+L  F   +E T            V+TESGI +R +V  +  +GV +FLVGE FMR   PG  LQ LFF
Sbjct:  127 PYQVWEARAIGADAILLIVAALSDAELQSLEATAQSLDLAVLVEVHDAAELQRALK-LRTPLIGINNRDLRRFVTEIETTLKLLPEIPRERIVVTESGIRSREEVATLRAAGVGAFLVGEAFMRTAQPGDALQHLFF 262          
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_NEIMF (Indole-3-glycerol phosphate synthase OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=trpC PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.116e-29
Identity = 71/135 (52.59%), Postives = 93/135 (68.89%), Query Frame = 1
Query:    4 YQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLF 408
            YQ+ +ARA GAD VLLI +AL+  ++    AVA  +G+ VL+E+HD  ELE+  + L TPL GVNNRNL TFEVSL+ T            V+TESGI  +ADVE M+  GV++FL+GETFMRA+N  AE+ +LF
Sbjct:  128 YQVYQARAWGADAVLLIAAALEQEQLERFEAVAHELGMTVLLELHDESELEKC-RNLTTPLWGVNNRNLRTFEVSLDQTLSLLPALEGKT-VVTESGITGKADVEFMQSRGVHTFLIGETFMRADNIEAEVGKLF 260          
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_DECAR (Indole-3-glycerol phosphate synthase OS=Dechloromonas aromatica (strain RCB) GN=trpC PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.904e-29
Identity = 71/135 (52.59%), Postives = 90/135 (66.67%), Query Frame = 1
Query:    4 YQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLF 408
            YQ+ EARA+GAD +LLI +AL   +M  L   A + G+ VLVEVH+G+EL+ AL+ L TPL+G+NNRNL TF V+LE T            V+TESGI+   +V LM  + V +FLVGE FMR   PGAEL RLF
Sbjct:  128 YQVAEARAMGADAILLIAAALTLEEMQALETQASAYGMAVLVEVHNGEELDAALQ-LKTPLLGINNRNLRTFAVTLETTLGLLSRIPAGRIVVTESGILKPEEVALMRTNKVNAFLVGEAFMRVPEPGAELARLF 261          
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_NEIG2 (Indole-3-glycerol phosphate synthase OS=Neisseria gonorrhoeae (strain NCCP11945) GN=trpC PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.487e-29
Identity = 70/135 (51.85%), Postives = 93/135 (68.89%), Query Frame = 1
Query:    4 YQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLF 408
            YQ+ +ARA GAD VLLI +AL+  ++    A+A  +G+ VL+E+HD  ELE+  + L TPL GVNNRNL TFEVSL+ T            V+TESGI  +ADVE M   GV++FL+GETFMRA++ GAE+ +LF
Sbjct:  128 YQVYQARAWGADAVLLIAAALEQGQLERFEALAHELGMTVLLELHDETELEKC-RNLTTPLRGVNNRNLRTFEVSLDQTLSLLPALEGKT-VVTESGITGKADVEFMRARGVHTFLIGETFMRADDIGAEVGKLF 260          
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_NEIG1 (Indole-3-glycerol phosphate synthase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=trpC PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.487e-29
Identity = 70/135 (51.85%), Postives = 93/135 (68.89%), Query Frame = 1
Query:    4 YQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLF 408
            YQ+ +ARA GAD VLLI +AL+  ++    A+A  +G+ VL+E+HD  ELE+  + L TPL GVNNRNL TFEVSL+ T            V+TESGI  +ADVE M   GV++FL+GETFMRA++ GAE+ +LF
Sbjct:  128 YQVYQARAWGADAVLLIAAALEQGQLERFEALAHELGMTVLLELHDETELEKC-RNLTTPLWGVNNRNLRTFEVSLDQTLSLLPALEGKT-VVTESGITGKADVEFMRARGVHTFLIGETFMRADDIGAEVGKLF 260          
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_NEIMB (Indole-3-glycerol phosphate synthase OS=Neisseria meningitidis serogroup B GN=trpC PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.541e-29
Identity = 70/135 (51.85%), Postives = 93/135 (68.89%), Query Frame = 1
Query:    4 YQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLF 408
            YQ+ +ARA GAD VLLI +AL+  ++    AVA  +G+ VL+E+HD  ELE+  + L TPL GVNNRNL TFEVSL+ T            V+TESGI  +ADVE M+  GV++FL+GETFMRA++  AE+ +LF
Sbjct:  128 YQVYQARAWGADAVLLIAAALEQEQLERFEAVAHELGMTVLLELHDETELEKC-RNLTTPLWGVNNRNLRTFEVSLDQTLSLLPALEGKT-VVTESGITGKADVEFMQSRGVHTFLIGETFMRADDIEAEVGKLF 260          
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_NEIMA (Indole-3-glycerol phosphate synthase OS=Neisseria meningitidis serogroup A GN=trpC PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.236e-29
Identity = 70/135 (51.85%), Postives = 93/135 (68.89%), Query Frame = 1
Query:    4 YQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLF 408
            YQ+ +ARA GAD VLLI +AL+  ++    AVA  +G+ VL+E+HD  ELE+  + L TPL GVNNRNL TFEVSL+ T            V+TESGI  +ADVE M+  GV++FL+GETFMRA++  AE+ +LF
Sbjct:  128 YQVYQARAWGADAVLLIAAALEREQLERFEAVAHELGMTVLLELHDESELEKC-RNLTTPLWGVNNRNLRTFEVSLDQTLSLLPALEGKT-VVTESGITGKADVEFMQSRGVHTFLIGETFMRADDIEAEVGKLF 260          
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_LEGPH (Indole-3-glycerol phosphate synthase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=trpC PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.451e-29
Identity = 64/134 (47.76%), Postives = 92/134 (68.66%), Query Frame = 1
Query:    4 YQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRL 405
            YQI E+  LGADC+LLIV+ LDDV++ +   +A+ + + VLVE H  DELERAL+ L TPL+G+NNR+LH F+  ++ +            +ITESGI  R D++LM+  G+ +FL+GE+ MRA+N G  LQ+L
Sbjct:  123 YQIYESLVLGADCILLIVALLDDVQLMDFCQLAQELKMSVLVESHTQDELERALR-LPTPLIGINNRSLHNFKTDIQLSIQLKQFVPKDKIIITESGINTREDIKLMQSHGINAFLIGESLMRADNIGKALQKL 255          
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_LEGPC (Indole-3-glycerol phosphate synthase OS=Legionella pneumophila (strain Corby) GN=trpC PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.451e-29
Identity = 64/134 (47.76%), Postives = 92/134 (68.66%), Query Frame = 1
Query:    4 YQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRL 405
            YQI E+  LGADC+LLIV+ LDDV++ +   +A+ + + VLVE H  DELERAL+ L TPL+G+NNR+LH F+  ++ +            +ITESGI  R D++LM+  G+ +FL+GE+ MRA+N G  LQ+L
Sbjct:  123 YQIYESLVLGADCILLIVALLDDVQLMDFCQLAQELKMSVLVESHTQDELERALR-LPTPLIGINNRSLHNFKTDIQLSIQLKQFVPKDKIIITESGINTREDIKLMQSHGINAFLIGESLMRADNIGKALQKL 255          
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_LEGPA (Indole-3-glycerol phosphate synthase OS=Legionella pneumophila (strain Paris) GN=trpC PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.451e-29
Identity = 64/134 (47.76%), Postives = 92/134 (68.66%), Query Frame = 1
Query:    4 YQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRL 405
            YQI E+  LGADC+LLIV+ LDDV++ +   +A+ + + VLVE H  DELERAL+ L TPL+G+NNR+LH F+  ++ +            +ITESGI  R D++LM+  G+ +FL+GE+ MRA+N G  LQ+L
Sbjct:  123 YQIYESLVLGADCILLIVALLDDVQLMDFCQLAQELKMSVLVESHTQDELERALR-LPTPLIGINNRSLHNFKTDIQLSIQLKQFVPKDKIIITESGINTREDIKLMQSHGINAFLIGESLMRADNIGKALQKL 255          
The following BLAST results are available for this feature:
BLAST of EY684638 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 383
Match NameE-valueIdentityDescription
TRPC_ACIF21.010e-3052.55Indole-3-glycerol phosphate synthase OS=Acidithiob... [more]
TRPC_NEIMF1.116e-2952.59Indole-3-glycerol phosphate synthase OS=Neisseria ... [more]
TRPC_DECAR1.904e-2952.59Indole-3-glycerol phosphate synthase OS=Dechloromo... [more]
TRPC_NEIG22.487e-2951.85Indole-3-glycerol phosphate synthase OS=Neisseria ... [more]
TRPC_NEIG12.487e-2951.85Indole-3-glycerol phosphate synthase OS=Neisseria ... [more]
TRPC_NEIMB5.541e-2951.85Indole-3-glycerol phosphate synthase OS=Neisseria ... [more]
TRPC_NEIMA7.236e-2951.85Indole-3-glycerol phosphate synthase OS=Neisseria ... [more]
TRPC_LEGPH9.451e-2947.76Indole-3-glycerol phosphate synthase OS=Legionella... [more]
TRPC_LEGPC9.451e-2947.76Indole-3-glycerol phosphate synthase OS=Legionella... [more]
TRPC_LEGPA9.451e-2947.76Indole-3-glycerol phosphate synthase OS=Legionella... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-015-E11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684638 ID=EY684638; Name=EY684638; organism=Citrus sinensis; type=EST; length=851bp
CCCTACCAGATCGTCGAAGCTCGTGCCTTGGGCGCCGATTGCGTGCTGTT
GATCGTCTCCGCACTGGATGACGTGAAGATGGCCGAACTGGCGGCCGTGG
CCAAAAGCGTCGGCCTCGACGTGCTGGTGGAAGTGCACGACGGTGATGAA
CTGGAACGCGCGTTGAAAACCCTCGACACACCGTTGGTGGGCGTCAACAA
CCGCAACCTGCACACGTTTGAAGTCAGCCTGGAAAACACCCTCGACCTGT
TGCCGCGTATCCCGCGTGACCGGTTGGTGATTACCGAAAGTGGCATCGTC
AATCGCGCCGATGTCGAACTGATGGAAATCAGCGGCGTGTACTCGTTCCT
CGTCGGCGAAACCTTCATGCGTGCCGAGAACCCGGGGGCTGAATTGCAGC
GCCTGTTCTTCCCGGAGCGTGGCGTTGCTGTCAGCGGTTCGACCCTGGAT
TGATGATGACCCAGCCGGTGGCGATGACGGTCGAGGCAGGCCTTAAGGCC
GAGCAGGATTTGCTCGCCGCTGTCTGCGCGGGGGAGCAGCCGTTCGGCCT
GCTGTTCTGGCAGCCCAGCGATCCAACGTTGGTGATGCCTCCGCGTTTGA
GCCGACTTCCGGCATTCGAGACGCGCAGTCAGGTATCCGGCACGAGGCCG
GTTGCCCGGGGCTGCGTGCGGGAAGACGGCGGTGGACTGGGACCGGCACG
AAGAGGCGACGGACGAACCGTCCCTGGCGGGAGCGCAAGCAGCGGGGAGG
GCGTGAGCGAGGGGGGTCGCGAGCGGAGAGGGAGGGTTGTAAACGTGCAT
CCGGCGGCCCGCAACCCAACGGGGGAGCCGCCCCACCGGCCGCATGGGGG
G
back to top