EY684626

Overview
NameEY684626
Unique NameEY684626
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length385
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684626 vs. ExPASy Swiss-Prot
Match: CADH3_ORYSJ (Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza sativa subsp. japonica GN=CAD3 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.960e-15
Identity = 40/50 (80.00%), Postives = 43/50 (86.00%), Query Frame = 3
Query:   12 QEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAA 161
            QEMI+ AAKH +TADIEVI  D VNTAMERLAKADVRYRFVID+ NTL A
Sbjct:  313 QEMIELAAKHGVTADIEVIGADDVNTAMERLAKADVRYRFVIDVGNTLHA 362          
BLAST of EY684626 vs. ExPASy Swiss-Prot
Match: CADH7_ORYSJ (Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa subsp. japonica GN=CAD7 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.919e-14
Identity = 37/48 (77.08%), Postives = 41/48 (85.42%), Query Frame = 3
Query:   12 QEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 155
            QEMIDFAA+H + ADIE+I  D VNTAMERLAK DVRYRFV+DI NTL
Sbjct:  329 QEMIDFAAEHGVAADIELIGADEVNTAMERLAKGDVRYRFVVDIGNTL 376          
BLAST of EY684626 vs. ExPASy Swiss-Prot
Match: MTDH1_STYHU (Probable mannitol dehydrogenase 1 OS=Stylosanthes humilis GN=CAD1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.273e-14
Identity = 34/51 (66.67%), Postives = 46/51 (90.20%), Query Frame = 3
Query:   12 QEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAAT 164
            QEM+DF  KHNI A+IE+I MD +NTA+ERL+KADV+YRFVID+AN+L+++
Sbjct:  302 QEMLDFCGKHNIAANIELIKMDEINTAIERLSKADVKYRFVIDVANSLSSS 352          
BLAST of EY684626 vs. ExPASy Swiss-Prot
Match: MTDH_MEDSA (Probable mannitol dehydrogenase OS=Medicago sativa GN=CAD1 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.275e-14
Identity = 35/50 (70.00%), Postives = 43/50 (86.00%), Query Frame = 3
Query:   12 QEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAA 161
            QEM+DF  KHNITADIE+I M  +NTAMERL KADV+YRFVID+AN+ ++
Sbjct:  309 QEMLDFCGKHNITADIELIKMHEINTAMERLHKADVKYRFVIDVANSFSS 358          
BLAST of EY684626 vs. ExPASy Swiss-Prot
Match: GEDH1_OCIBA (Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GEDH1 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.523e-14
Identity = 34/48 (70.83%), Postives = 43/48 (89.58%), Query Frame = 3
Query:   12 QEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 155
            QEMIDFAAK+NI AD+EVI +DY+NTAM+RL K+DV+YRFVID+  +L
Sbjct:  310 QEMIDFAAKNNIVADVEVIPIDYINTAMDRLLKSDVKYRFVIDVEKSL 357          
BLAST of EY684626 vs. ExPASy Swiss-Prot
Match: CAD8C_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8C OS=Oryza sativa subsp. japonica GN=CAD8C PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 2.122e-13
Identity = 35/50 (70.00%), Postives = 41/50 (82.00%), Query Frame = 3
Query:   12 QEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAA 161
            Q M+DFA +H ITA++EVI MDYVNTAMERL K DVRYRFVID+A +  A
Sbjct:  383 QAMLDFAGEHGITAEVEVIKMDYVNTAMERLEKNDVRYRFVIDVAGSSLA 432          
BLAST of EY684626 vs. ExPASy Swiss-Prot
Match: CAD8B_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8B OS=Oryza sativa subsp. japonica GN=CAD8B PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 2.771e-13
Identity = 34/47 (72.34%), Postives = 40/47 (85.11%), Query Frame = 3
Query:   12 QEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANT 152
            Q M+DFA +H ITA++EVI MDYVNTAMERL K DVRYRFVID+A +
Sbjct:  380 QAMLDFAGEHGITAEVEVIKMDYVNTAMERLEKNDVRYRFVIDVAGS 426          
BLAST of EY684626 vs. ExPASy Swiss-Prot
Match: CADH9_ORYSJ (Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza sativa subsp. japonica GN=CAD9 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.619e-13
Identity = 33/52 (63.46%), Postives = 42/52 (80.77%), Query Frame = 3
Query:   12 QEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAATK 167
            QEM+DFA +H + A++EVI M+ VN AMERL K DVRYRFVID+ANT+A  +
Sbjct:  311 QEMVDFAVEHGVAAEVEVIGMEDVNGAMERLQKGDVRYRFVIDVANTMARAR 362          
BLAST of EY684626 vs. ExPASy Swiss-Prot
Match: CADH2_ARATH (Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis thaliana GN=CAD2 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.375e-12
Identity = 32/48 (66.67%), Postives = 42/48 (87.50%), Query Frame = 3
Query:   12 QEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 155
            QEM++F AKH I +DIE+I M  +N+AM+RLAK+DVRYRFVID+AN+L
Sbjct:  306 QEMLEFCAKHKIVSDIELIKMSDINSAMDRLAKSDVRYRFVIDVANSL 353          
BLAST of EY684626 vs. ExPASy Swiss-Prot
Match: CADH3_ARATH (Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis thaliana GN=CAD3 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.001e-12
Identity = 31/48 (64.58%), Postives = 41/48 (85.42%), Query Frame = 3
Query:   12 QEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 155
            QEM++F AKH I +DIE+I M  +N+AM+RL K+DVRYRFVID+AN+L
Sbjct:  305 QEMLEFCAKHKIVSDIELIKMSDINSAMDRLVKSDVRYRFVIDVANSL 352          
The following BLAST results are available for this feature:
BLAST of EY684626 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
CADH3_ORYSJ2.960e-1580.00Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza... [more]
CADH7_ORYSJ1.919e-1477.08Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa s... [more]
MTDH1_STYHU3.273e-1466.67Probable mannitol dehydrogenase 1 OS=Stylosanthes ... [more]
MTDH_MEDSA4.275e-1470.00Probable mannitol dehydrogenase OS=Medicago sativa... [more]
GEDH1_OCIBA9.523e-1470.83Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GE... [more]
CAD8C_ORYSJ2.122e-1370.00Probable cinnamyl alcohol dehydrogenase 8C OS=Oryz... [more]
CAD8B_ORYSJ2.771e-1372.34Probable cinnamyl alcohol dehydrogenase 8B OS=Oryz... [more]
CADH9_ORYSJ3.619e-1363.46Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza... [more]
CADH2_ARATH1.375e-1266.67Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis th... [more]
CADH3_ARATH4.001e-1264.58Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-015-D07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684626 ID=EY684626; Name=EY684626; organism=Citrus sinensis; type=EST; length=385bp
CCACGCGTCCGCAAGAGATGATTGATTTTGCAGCAAAACACAATATAACA
GCTGACATTGAGGTTATTTCGATGGATTATGTCAATACGGCAATGGAGCG
GCTCGCCAAGGCTGATGTTCGGTATCGATTTGTCATTGATATTGCAAACA
CCTTGGCCGCCACCAAACCTTGAAGAATCAGAATCAGAATCAGATTGGTG
TCTTCAATTCACAACTTTGTTCCATGATCCACTTTGCTATATGTAATGCT
CCCTCGATCATTACACTCTTTTAGCGCTTAAATTACTTTTAATTTCCAGT
TACATCACCCTAATTATGTCGTGATTGCCAAAAAACTATAAATGTTAATG
AAATAAAACATTGTTCATATAAAAAAAAAAAAAAA
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