EY684626

Overview
NameEY684626
Unique NameEY684626
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length385
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY684626 vs. ExPASy Swiss-Prot
Match: CAD8D_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8D OS=Oryza sativa subsp. japonica GN=CAD8D PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.546e-11
Identity = 29/50 (58.00%), Postives = 39/50 (78.00%), Query Frame = 3 
Query:   12 QEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAA 161
            Q M+DFA +H I AD+EV++MD VN A+ RL + DVRYRFV+D+A T+ A
Sbjct:  305 QAMLDFAGEHGIAADVEVVAMDAVNAALGRLERNDVRYRFVVDVAGTMHA 354
The following BLAST results are available for this feature:
BLAST of EY684626 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
CAD8D_ORYSJ7.546e-1158.00Probable cinnamyl alcohol dehydrogenase 8D OS=Oryz... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-015-D07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684626 ID=EY684626; Name=EY684626; organism=Citrus sinensis; type=EST; length=385bp
CCACGCGTCCGCAAGAGATGATTGATTTTGCAGCAAAACACAATATAACA
GCTGACATTGAGGTTATTTCGATGGATTATGTCAATACGGCAATGGAGCG
GCTCGCCAAGGCTGATGTTCGGTATCGATTTGTCATTGATATTGCAAACA
CCTTGGCCGCCACCAAACCTTGAAGAATCAGAATCAGAATCAGATTGGTG
TCTTCAATTCACAACTTTGTTCCATGATCCACTTTGCTATATGTAATGCT
CCCTCGATCATTACACTCTTTTAGCGCTTAAATTACTTTTAATTTCCAGT
TACATCACCCTAATTATGTCGTGATTGCCAAAAAACTATAAATGTTAATG
AAATAAAACATTGTTCATATAAAAAAAAAAAAAAA
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