EY684613

Overview
NameEY684613
Unique NameEY684613
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY684613 vs. ExPASy Swiss-Prot
Match: KCS15_ARATH (3-ketoacyl-CoA synthase 15 OS=Arabidopsis thaliana GN=KCS15 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.077e-26
Identity = 75/261 (28.74%), Postives = 119/261 (45.59%), Query Frame = 2 
Query:   29 IDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNIALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRXXXXXXXXXXXXFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGVNLKAGIEHFCLHPGRRAVIDGTGKGLGLDEYHLEPARMALPRIGKHPPGALGYVLGY 811
            I +LV+N  + +  PSL++ +IN Y LR++ +++NL GMGCSA V+A+DL + L   ++   A+VVSTE +   WY G + +++  N  FR G  +++L++    + +A  +L  LVRTH G  D +Y+     ED+ G  G                 N+                                    A LG    L+   EH C+    + V+D   K L L E ++E +R  L R G     ++ Y L Y
Sbjct:  184 IKILVLNCGVLNTTPSLSAMVINHYKLRHNTESYNLGGMGCSAGVIAIDLAKDLLNAHQGSYALVVSTEIVSFTWYSGNDVALLPPNCFFRMGAAAVMLSSRRIDRWRAKYQLMQLVRTHKGMEDTSYKSIELREDRDGKQGLYVSRDVMEVGRHALKANI------------------------------------ATLG---RLEPSFEHICVLASSKKVLDDIHKDLKLTEENMEASRRTLERFGNTSSSSIWYELAY 405
The following BLAST results are available for this feature:
BLAST of EY684613 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
KCS15_ARATH1.077e-2628.743-ketoacyl-CoA synthase 15 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-015-C05-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684613 ID=EY684613; Name=EY684613; organism=Citrus sinensis; type=EST; length=811bp
CCACGCGTCCGCGGACGCGTGGGCTGAAATTGACGTTCTTGTCGTGAATG
TGTCGCTATTTTCTCCTGCTCCTTCTCTTACATCTCGAATTATAAATCGC
TACAACCTGAGGAACGATATTAAGGCCTTCAATTTATCCGGAATGGGCTG
CAGTGCAAGCGTGGTAGCCGTTGATCTTGTGCAGCAGCTCTTCAGAACCT
ACAAAAACAAGCTTGCAATTGTTGTGAGCACAGAGTCCATGGGACCTAAC
TGGTACTGCGGCAGAGAAAAATCTATGATGCTTTCGAATATTTTGTTCCG
CTCAGGTGGGTGCTCAATGCTTTTGACGAACAACATAGCGTTAAAGCACA
AAGCAATCTTGAAGTTGAACTGTTTAGTGAGAACCCATTTTGGCTCAAAC
GATGAAGCTTATGAATGCTGTATGCAAGTTGAAGATCAACAAGGGCACCC
CGGCTTTCGCCTCACGAAACAGCTAACAAAAGCTGCAGCTCTGGCTTTCA
CAATGAATCTCCAGGTTCTTGTTCCGAAAATATTGCCTCTCAGAGAGCAA
TTTCGGTATGTAATCCAATCCTATTATGAAAACAGAATCAGAAAAAGCAC
TTCTAGTACTAAACCTGAAGCAGTACTCGGAGCAGGGGTGAACCTGAAAG
CTGGAATTGAGCATTTCTGCTTACATCCTGGAAGAAGAGCTGTGATTGAT
GGGACTGGAAAGGGCTTGGGATTGGATGAATACCATCTTGAGCCCGCAAG
AATGGCGCTTCCTCGAATCGGAAAACATCCACCCGGGGCCCTGGGGTATG
TTTTAGGCTAC
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