EY684612

Overview
NameEY684612
Unique NameEY684612
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684612 vs. ExPASy Swiss-Prot
Match: GLYR1_RAT (Putative oxidoreductase GLYR1 OS=Rattus norvegicus GN=Glyr1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.246e-14
Identity = 51/176 (28.98%), Postives = 75/176 (42.61%), Query Frame = 2
Query:   35 LDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHY 562
            L+APVSG    +  G L  +  G    Y+     F +MGK + + G  GN A   +  N+     M  ++E LTL Q  G S  TL  ILN         D       +++G     N+   F  K + KDL LA+A    V    P+ + A ++Y +         D S V++ Y
Sbjct:  382 LEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDILNQGQLASIFLD--QKCQNILQG-----NFKPDFYLKYIQKDLRLAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYRAY 550          
BLAST of EY684612 vs. ExPASy Swiss-Prot
Match: GLYR1_PONAB (Putative oxidoreductase GLYR1 OS=Pongo abelii GN=GLYR1 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 5.246e-14
Identity = 51/176 (28.98%), Postives = 75/176 (42.61%), Query Frame = 2
Query:   35 LDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHY 562
            L+APVSG    +  G L  +  G    Y+     F +MGK + + G  GN A   +  N+     M  ++E LTL Q  G S  TL  ILN         D       +++G     N+   F  K + KDL LA+A    V    P+ + A ++Y +         D S V++ Y
Sbjct:  383 LEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDILNQGQLASIFLD--QKCQNILQG-----NFKPDFYLKYIQKDLRLAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYRAY 551          
BLAST of EY684612 vs. ExPASy Swiss-Prot
Match: GLYR1_MOUSE (Putative oxidoreductase GLYR1 OS=Mus musculus GN=Glyr1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.246e-14
Identity = 51/176 (28.98%), Postives = 75/176 (42.61%), Query Frame = 2
Query:   35 LDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHY 562
            L+APVSG    +  G L  +  G    Y+     F +MGK + + G  GN A   +  N+     M  ++E LTL Q  G S  TL  ILN         D       +++G     N+   F  K + KDL LA+A    V    P+ + A ++Y +         D S V++ Y
Sbjct:  376 LEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDILNQGQLASIFLD--QKCQNILQG-----NFKPDFYLKYIQKDLRLAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYRAY 544          
BLAST of EY684612 vs. ExPASy Swiss-Prot
Match: GLYR1_BOVIN (Putative oxidoreductase GLYR1 OS=Bos taurus GN=GLYR1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.246e-14
Identity = 51/176 (28.98%), Postives = 75/176 (42.61%), Query Frame = 2
Query:   35 LDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHY 562
            L+APVSG    +  G L  +  G    Y+     F +MGK + + G  GN A   +  N+     M  ++E LTL Q  G S  TL  ILN         D       +++G     N+   F  K + KDL LA+A    V    P+ + A ++Y +         D S V++ Y
Sbjct:  383 LEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDILNQGQLASIFLD--QKCQNILQG-----NFKPDFYLKYIQKDLRLAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYRAY 551          
BLAST of EY684612 vs. ExPASy Swiss-Prot
Match: GLYR1_HUMAN (Putative oxidoreductase GLYR1 OS=Homo sapiens GN=GLYR1 PE=1 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 1.993e-13
Identity = 50/176 (28.41%), Postives = 74/176 (42.05%), Query Frame = 2
Query:   35 LDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHY 562
            L+APVSG    +  G L  +  G    Y+     F +MGK + + G  GN A   +  N+     M  ++E LTL    G S  TL  ILN         D       +++G     N+   F  K + KDL LA+A    V    P+ + A ++Y +         D S V++ Y
Sbjct:  383 LEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAHVTGQSQQTLLDILNQGQLASIFLD--QKCQNILQG-----NFKPDFYLKYIQKDLRLAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYRAY 551          
BLAST of EY684612 vs. ExPASy Swiss-Prot
Match: YGBJ_ECOLI (Uncharacterized oxidoreductase ygbJ OS=Escherichia coli (strain K12) GN=ygbJ PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.688e-12
Identity = 50/180 (27.78%), Postives = 84/180 (46.67%), Query Frame = 2
Query:   32 MLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGKNTIYCGG-AGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYG 568
            MLDAPVSGG + A  G +T M  GS+ A++   P+  ++       G   G G+  KI + L   V +   +EA+ L    GI    +  ++ +++   W  +  N +  V++G     +Y    A  +  KDL L   +AK +    PL S A +++      G+  +D S V + + G
Sbjct:  122 MLDAPVSGGAVKAANGEMTVMASGSDIAFERLAPVLEAVAGKVYRIGAEPGLGSTVKIIHQLLAGVHIAAGAEAMALAARAGIPLDVMYDVVTNAAGNSWMFE--NRMRHVVDG-----DYTPHSAVDIFVKDLGLVADTAKALHFPLPLASTALNMFTSASNAGYGKEDDSAVIKIFSG 294          
BLAST of EY684612 vs. ExPASy Swiss-Prot
Match: Y1010_HAEIN (Uncharacterized oxidoreductase HI1010 OS=Haemophilus influenzae GN=HI1010 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.094e-11
Identity = 50/181 (27.62%), Postives = 82/181 (45.30%), Query Frame = 2
Query:   29 VMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGKNTIYCG-GAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYG 568
            +MLDAPVSGG   A  G +T M  GS+ A++  +P+  +        G   G GA  KI + L   V +   +EA+ L    GI    +  ++ +++   W  +  N +  V+EG     +Y       +  KDL L   +AK +     L S A  ++ +    G+  +D S V + + G
Sbjct:  120 IMLDAPVSGGAAKALKGEMTVMASGSKQAFELLQPVLDATAAKVYNIGEEIGLGATVKIVHQLLAGVHIAAGAEAMALASKAGIPLDVMYDVVTNAAGNSWMFE--NRMKHVVEG-----DYTPLSMVDIFVKDLGLVNDTAKSLHFPLHLASTAYSMFTEASNAGYGKEDDSAVIKIFSG 293          
BLAST of EY684612 vs. ExPASy Swiss-Prot
Match: GLYR1_DANRE (Putative oxidoreductase GLYR1 OS=Danio rerio GN=glyr1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.094e-11
Identity = 48/177 (27.12%), Postives = 75/177 (42.37%), Query Frame = 2
Query:   35 LDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGKNTIYCGG-AGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHY 562
            L+APVSG    +  G L  +  G    Y+     F +MGK + +  G AGN A   +  N+     M  ++E LTL Q+ G S  T   IL          D       +++G     N+   +  K + KDL LA++    V    P+ + A ++Y +         D S V++ Y
Sbjct:  291 LEAPVSGSQQLSNDGMLVIVAAGDRSVYEDCSSCFQAMGKTSFFIAGEAGNAARMMLILNMVQGSFMATIAEGLTLAQATGQSQQTFLDILCQGQMASTFVD--QKCQNILQG-----NFKPDYYLKHIQKDLRLAISMGDSVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYRAY 460          
BLAST of EY684612 vs. ExPASy Swiss-Prot
Match: YIHU_SALTY (Uncharacterized oxidoreductase yihU OS=Salmonella typhimurium GN=yihU PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.866e-11
Identity = 49/176 (27.84%), Postives = 89/176 (50.57%), Query Frame = 2
Query:   32 MLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNN-LTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQ 556
            M+D P+      A  GTL  + GG+ +  + A P+ ++MG   +  GG G G   K+ NN +++A++ L  +EA  L ++LG+S     K+++ ++A      +  P   VM+G     +    F   L  KDL +AL  A ++ V  PL + ++++Y      G   +D+S + +
Sbjct:  116 MMDVPIGRTSDNAITGTLLLLAGGTAEQVERATPVLMAMGNELVNTGGPGMGIRVKLINNYMSIALNALS-AEAAVLCEALGLSFDVALKVMSGTAAGKGHFTTTWP-NKVMKG-----DLSPAFMIDLAHKDLGIALDVANQLHVPMPLGAASREVYNLARAAGRGREDWSAILE 284          
BLAST of EY684612 vs. ExPASy Swiss-Prot
Match: YIHU_SHIFL (Uncharacterized oxidoreductase yihU OS=Shigella flexneri GN=yihU PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.437e-11
Identity = 47/176 (26.70%), Postives = 86/176 (48.86%), Query Frame = 2
Query:   32 MLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNN-LTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQ 556
            M+D PV      A  GTL  + GG+ +  + A P+ ++MG   I  GG G G   K+ NN +++A++ L  +EA  L ++L +      K+++ ++A      +  P          S +    F   L  KDL +AL  A ++ V  PL + ++++Y++    G   +D+S + +
Sbjct:  116 MMDVPVGRTSANAITGTLLLLAGGTAEQVERATPILMAMGSELINAGGPGMGIRVKLINNYMSIALNALS-AEAAVLCEALNLPFDVAVKVMSGTAAGKGHFTTSWP------NKVLSGDLSPAFMIDLAHKDLGIALDVANQLHVPMPLGAASREVYSQARAAGRGRQDWSAILE 284          
The following BLAST results are available for this feature:
BLAST of EY684612 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
GLYR1_RAT5.246e-1428.98Putative oxidoreductase GLYR1 OS=Rattus norvegicus... [more]
GLYR1_PONAB5.246e-1428.98Putative oxidoreductase GLYR1 OS=Pongo abelii GN=G... [more]
GLYR1_MOUSE5.246e-1428.98Putative oxidoreductase GLYR1 OS=Mus musculus GN=G... [more]
GLYR1_BOVIN5.246e-1428.98Putative oxidoreductase GLYR1 OS=Bos taurus GN=GLY... [more]
GLYR1_HUMAN1.993e-1328.41Putative oxidoreductase GLYR1 OS=Homo sapiens GN=G... [more]
YGBJ_ECOLI1.688e-1227.78Uncharacterized oxidoreductase ygbJ OS=Escherichia... [more]
Y1010_HAEIN1.094e-1127.62Uncharacterized oxidoreductase HI1010 OS=Haemophil... [more]
GLYR1_DANRE1.094e-1127.12Putative oxidoreductase GLYR1 OS=Danio rerio GN=gl... [more]
YIHU_SALTY1.866e-1127.84Uncharacterized oxidoreductase yihU OS=Salmonella ... [more]
YIHU_SHIFL2.437e-1126.70Uncharacterized oxidoreductase yihU OS=Shigella fl... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-015-C04-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684612 ID=EY684612; Name=EY684612; organism=Citrus sinensis; type=EST; length=871bp
CCACGCGTCCGATTCATGGGAAAACCCTGTCATGTTGGATGCTCCCGTCT
CTGGGGGTGTTCTTGCTGCAGAGGCTGGTACACTAACTTTCATGGTTGGT
GGCTCTGAGGATGCATATCAGGCTGCAAAACCCTTGTTCCTCTCAATGGG
GAAAAACACAATATACTGTGGTGGAGCAGGAAATGGGGCGGCAGCAAAAA
TTTGCAATAACTTGACAATGGCTGTGAGCATGCTTGGGGTGTCAGAAGCC
CTGACACTTGGTCAGTCGCTAGGAATATCTGCTAGTACTCTAACAAAGAT
ATTGAACTCTTCAAGTGCTCGCTGTTGGAGTAGTGACAGTTATAATCCTG
TTCCTGGGGTGATGGAAGGGGTGCCGGCTTCAAGGAATTATGGTGGTGGG
TTTGCATCTAAGCTCATGGCCAAAGACTTGAACCTTGCTTTGGCATCAGC
AAAAGAGGTTGGCGTCGATTGCCCGTTAACATCACAAGCACAAGACATAT
ACGCGAAGCTCTGTGAGAATGGACATGATTCCAAGGACTTCTCCTGCGTT
TTCCAGCATTATTATGGAGGCAAGGATGAAGTTTAGCTTCAACATTCAAG
GACACTGCTTTTACCAATCCATTCTGATTCTCTTGTAAAATCAAAGCGCA
TTCAATCGAAATTAACCTCCCTAAGGCTCGTCCCTTTTCACAGAATAAAT
TGCAGCCTATAAAATCTTTTTCAGGTATATGAATATTTACCCCTGAAGAG
ATAGAGATAGAGAATCCTGGTATATGCATGTTGGAAAACCAATTAACCAA
TGGGCTTTTTCTTGGCCAAAAAAANAAAACANCNGNGCGCGTGNGTGGAA
AAAAGAAGCGAAAAAGAAAGG
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