EY684552

Overview
NameEY684552
Unique NameEY684552
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1058
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY684552 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 9.454e-11
Identity = 36/114 (31.58%), Postives = 69/114 (60.53%), Query Frame = 3 
Query:  120 GYRSPQVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD--VELLKYHDVEKDMVQMLQIALSCVAKVPDSRPKMDDVVRMIRTNSTT 455
            GY +P+  ++ +A++K+DVYSFGVL+LE+L+GK P   S  +  +++  W++ ++ E+   ++ D   E ++   ++     +L IA  CV+  P+ RP M  VV+++ +   T
Sbjct:  470 GYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNVVGWLKFLISEKRPRDIVDPNCEGMQMESLD----ALLSIATQCVSPSPEERPTMHRVVQLLESEVMT 579
The following BLAST results are available for this feature:
BLAST of EY684552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
FEI1_ARATH9.454e-1131.58LRR receptor-like serine/threonine-protein kinase ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-001-E04-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684552 ID=EY684552; Name=EY684552; organism=Citrus sinensis; type=EST; length=1058bp
TTTTTTTTTTTTTTTTTTTGTNNNNCGGACGGGNGCCCNTATACGAGGGG
AGGAAGTTTTTCCCAAATGGTCANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNACACGCGTCCGAGGGTACCGTTCCCCACAAGTAACTGAGACCC
GGAAAGCGTCTCAAAAATCCGATGTTTATAGCTTCGGTGTGCTCCTCCTG
GAAATGCTGACAGGCAAAGCCCCTCTCCAACACTCGGGCCATGACGATGT
GGTTGATCTTCCAAGATGGGTCCGTTCTGTTGTTCGCGAGGAATGGACAG
CCGAGGTGTTTGATGTTGAGCTACTGAAGTACCACGATGTTGAAAAGGAC
ATGGTGCAGATGCTACAGATTGCATTGTCATGTGTAGCAAAGGTCCCAGA
CTCTAGGCCAAAAATGGATGACGTTGTTAGAATGATACGAACAAATTCAA
CAACCTGAGTTGAGGAACAGGGCATCTTCTGGAACTGAATCTAATGTCCA
AACACCCTGATTGCTTTGAACATTTTGCATTATGCTTCAAGCCGACTTTG
ATTGTTTGGGAGAATAACCCGTGCGCGACCTAAGATACATATGGATGGGG
GGGCGGTCCGCGCTGAAATCCGCAGAACCAACGAACTTCCAAATTCACCG
TTAGGGTCTTTGATTACGCGCGGAGTGCCACGCTGCGGAAACCGGCTGGG
GAGTGGGAAAGGGGAGCGAGGTTGCGAGGTCGAACACCCGGGGCGGGGGC
GCTTCAGACGGCGGCAGAGGGCCGAACAGTGCGGACCGAGAGAGAGCGGC
GGAGAGGCGGGCGATGAGGCGCCAGAGAATAAGAGAGCTTCTCTTGAAGT
ACTCTCCTAACCCAGTTCGTCGTCGCGCTTCTGAACTGGTATATGAGGCC
TAGTAGGTCTAACAGAGCGCGGGTCGCTAGGTCTGAACGAACGTGTGCCG
TGCTTCCCCCTACCAAGAGCCACCATCTCTTCTCTCGCATACTGAAGAGC
GGCGACACCGCCCTGGANTCTCGCCAATAACAACCGCACACAACCGCTGC
ACCGACAT
back to top