EY684548
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684548 vs. ExPASy Swiss-Prot
Match: NFI_XANCP (Endonuclease V OS=Xanthomonas campestris pv. campestris GN=nfi PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.833e-13 Identity = 41/108 (37.96%), Postives = 61/108 (56.48%), Query Frame = 3 Query: 378 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLADLTTIGVGK 701 + G D+ F ++D V+LD QTL + + + +PYVPG L+FRE P LL L + + P ++ +DG G+ HPR FG+A+H GV+ L +IGV K Sbjct: 43 LAGFDVGF-EDDGQTTRAAAVLLDAQTLLPLETHVARVPTSMPYVPGLLSFRELPALLRALALLART-----PDLVFIDGQGIAHPRRFGIAAHFGVVTGLPSIGVAK 144
BLAST of EY684548 vs. ExPASy Swiss-Prot
Match: NFI_XANCB (Endonuclease V OS=Xanthomonas campestris pv. campestris (strain B100) GN=nfi PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.833e-13 Identity = 41/108 (37.96%), Postives = 60/108 (55.56%), Query Frame = 3 Query: 378 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLADLTTIGVGK 701 + G D+ F E + V+LD QTL + + + +PYVPG L+FRE P LL L + + P ++ +DG G+ HPR FG+A+H GV+ L +IGV K Sbjct: 43 LAGFDVGFEDEGQTTRAAA-VLLDAQTLLPLETHVARVPTSMPYVPGLLSFRELPALLRALALLSRT-----PDLVFIDGQGIAHPRRFGIAAHFGVVTGLPSIGVAK 144
BLAST of EY684548 vs. ExPASy Swiss-Prot
Match: NFI_XANC8 (Endonuclease V OS=Xanthomonas campestris pv. campestris (strain 8004) GN=nfi PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.833e-13 Identity = 41/108 (37.96%), Postives = 61/108 (56.48%), Query Frame = 3 Query: 378 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLADLTTIGVGK 701 + G D+ F ++D V+LD QTL + + + +PYVPG L+FRE P LL L + + P ++ +DG G+ HPR FG+A+H GV+ L +IGV K Sbjct: 43 LAGFDVGF-EDDGQTTRAAAVLLDAQTLLPLETHVARVPTSMPYVPGLLSFRELPALLRALALLART-----PDLVFIDGQGIAHPRRFGIAAHFGVVTGLPSIGVAK 144
BLAST of EY684548 vs. ExPASy Swiss-Prot
Match: NFI_METTP (Endonuclease V OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=nfi PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 5.007e-13 Identity = 41/109 (37.61%), Postives = 63/109 (57.80%), Query Frame = 3 Query: 378 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLADLTTIGVGKN 704 + G D+SFS S A V+LD ++++ ++ + + PY+PG L FRE PV+L L+ + + VL+ DG G+ HPR FG ASH+G+L D +IG K+ Sbjct: 40 VAGADVSFSG---SRAHAAAVLLDYHDMRLLDVSFAEMDVVYPYIPGLLTFREGPVILRALEGIDEA------DVLLFDGQGIAHPRRFGEASHLGLLLDRPSIGCAKS 139
BLAST of EY684548 vs. ExPASy Swiss-Prot
Match: NFI_MYXXD (Endonuclease V OS=Myxococcus xanthus (strain DK 1622) GN=nfi PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.539e-13 Identity = 43/119 (36.13%), Postives = 65/119 (54.62%), Query Frame = 3 Query: 378 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLADLTTIGVGKNVNIDYTAPCG 734 I G D+S K + G VVLD++TL V + +++ L PYVPG L+FRE P + + + + R P V++ DG G HPR G+A H G+L + +IG K++ + P G Sbjct: 43 IAGADISTEKGKDT-GFGGFVVLDVETLAPVAQSEAVVTLHFPYVPGLLSFRELPTIAAAWERLTVR-----PDVVIFDGQGTAHPRRMGIACHGGLLFGVPSIGCAKSLLVGTHGPLG 155
BLAST of EY684548 vs. ExPASy Swiss-Prot
Match: NFI_GEOUR (Endonuclease V OS=Geobacter uraniireducens (strain Rf4) GN=nfi PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.539e-13 Identity = 41/109 (37.61%), Postives = 61/109 (55.96%), Query Frame = 3 Query: 378 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLADLTTIGVGKN 704 + GVD +++ E+ V+ DL TL V + + R +PY+PGFL+FRE P L + + KR P +L+VDG G+ H + FGLA H+GV + IG K+ Sbjct: 38 VAGVDAAYAGEE---IVAVAVLFDLATLTPVARSFVVARPALPYIPGFLSFREGPHLAEAVRRLSKR-----PDLLIVDGQGIAHLKRFGLACHLGVELGIPAIGCAKS 138
BLAST of EY684548 vs. ExPASy Swiss-Prot
Match: NFI_ALHEH (Endonuclease V OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=nfi PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.115e-12 Identity = 39/111 (35.14%), Postives = 63/111 (56.76%), Query Frame = 3 Query: 372 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLADLTTIGVGKN 704 + + GVD +I +VV+ L L +V + + +PYVPG L+FRE P ++ L+ + P++L+ DG G+ HPR G+A+H+G++ DL IGVGK+ Sbjct: 40 RLVAGVDAGVVDGGRTIRAA-VVVMSLPDLAVVTQSVARAPAIMPYVPGLLSFRELPGVVRALEQLDVT-----PELLLCDGQGIAHPRRLGIAAHLGLITDLPAIGVGKS 144
BLAST of EY684548 vs. ExPASy Swiss-Prot
Match: NFI_THET8 (Endonuclease V OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=nfi PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.902e-12 Identity = 43/115 (37.39%), Postives = 64/115 (55.65%), Query Frame = 3 Query: 369 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQV--PYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLADLTTIGVGKNV 707 ++ I +D S + P +A + L+ L + +LL + PYVPG L+FREAP L L + + P+ L+VDG G+ HPRG G+ASH+GV DL ++GV K + Sbjct: 35 VRRIAALDASHKRGRPLVAVALLYDLEKGPLHVAT---ALLPEEALFPYVPGLLSFREAPAYLEALAALPEA-----PEALLVDGQGVAHPRGLGIASHLGVHLDLPSVGVAKRL 141
BLAST of EY684548 vs. ExPASy Swiss-Prot
Match: NFI_THET2 (Endonuclease V OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=nfi PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.902e-12 Identity = 43/115 (37.39%), Postives = 64/115 (55.65%), Query Frame = 3 Query: 369 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQV--PYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLADLTTIGVGKNV 707 ++ I +D S + P +A + L+ L + +LL + PYVPG L+FREAP L L + + P+ L+VDG G+ HPRG G+ASH+GV DL ++GV K + Sbjct: 35 VRRIAALDASHKRGRPLVAVALLYDLEKGPLHVAT---ALLPEEALFPYVPGLLSFREAPAYLEALAALPEA-----PEALLVDGQGVAHPRGLGIASHLGVHLDLPSVGVAKRL 141
BLAST of EY684548 vs. ExPASy Swiss-Prot
Match: NFI_XANAC (Endonuclease V OS=Xanthomonas axonopodis pv. citri GN=nfi PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.485e-12 Identity = 39/108 (36.11%), Postives = 59/108 (54.63%), Query Frame = 3 Query: 378 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLADLTTIGVGK 701 + G D+ F ++D V+LD QTL + + + +PYVPG L+FRE P LL L + + P ++ +DG G+ HPR G+A+H GV+ L IG+ K Sbjct: 42 LAGFDVGF-EDDGQTTRAAAVLLDAQTLLPLETHIARVPTSMPYVPGLLSFRELPALLQALALLSRT-----PDLVFIDGQGIAHPRKLGIAAHFGVVTGLPCIGIAK 143 The following BLAST results are available for this feature:
BLAST of EY684548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 113
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684548 ID=EY684548; Name=EY684548; organism=Citrus sinensis; type=EST; length=945bpback to top |