EY684547

Overview
NameEY684547
Unique NameEY684547
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: ARLY_STRAW (Argininosuccinate lyase OS=Streptomyces avermitilis GN=argH PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.038e-12
Identity = 61/219 (27.85%), Postives = 99/219 (45.21%), Query Frame = -3
Query:   97 GRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQLGVPEQPWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATR----VPGLVATMFSAMPQEHERSL 741
            GR ++D +AT   + LR    +I   LA   D L   A+ +    + GRT LQHA PV     +   + A++R  +RL +   R  V  +G  +   ++LG     VA+ L  E             RD + EFA +  +I  +L ++  ++ ++  T+             GSS MP K+NP  A +    + R    + GL+AT+  A+P  + R L
Sbjct:  113 GRSRNDQVATLFRMYLRDHARVIGGLLADLQDALIGLAEAHPDVAMPGRTHLQHAQPVLFAHHVLAHVQALSRDAERLRQWDERTAVSPYGSGALAGSSLGLDPESVAKDLGFEHGSVANSIDGTASRDFVAEFAFITAMIGVNLSRIAEEV-IIWNTKEFSFVTLHDAFSTGSSIMPQKKNPDIAELARGKSGRLIGNLTGLMATL-KALPLAYNRDL 329          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: ARLY_COLLI (Argininosuccinate lyase OS=Columba livia GN=ASL PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.038e-12
Identity = 70/257 (27.24%), Postives = 113/257 (43.97%), Query Frame = -3
Query:    1 GRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQ---LGVPEQPWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGLVAT---MFSAMPQEHERSL----GLWHAEWETLPEICRLVSGALHQAQLVSEGLE 741
            GR ++D + T L L ++++  +I   L +    L  +A       L G T LQ   P+     +     A+TR  +RL E+K R+ +L  G  SG LA  G       + L +EL    + +       QRD +VEF SV  L+   L K+  D+ ++  T        S     GSS MP K+NP    ++ S A RV G +A    +   +P  + + L           +TL  + ++ +G +   Q+  E +E
Sbjct:  110 GRSRNDQVVTDLKLFMKNSLSVISTHLLQLIKTLVERAAIEVDVILPGYTHLQKTQPIRWSQFLLSHAVALTRDSERLGEIKKRINILPLG--SGALA--GNPLEIDRELLRSELDFASISLNSMDAVRQRDSVVEFLSVAALLMIHLSKMAEDL-IIYSTSEFGFLTLSDTYCTGSSVMPQKKNPDSLELIRSKAGRVFGRLAAILMVLKGLPSTYNKDLQEDKEAVFDVVDTLNAVLQVATGVISTLQINKENME 361          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: ARLY_ACICJ (Argininosuccinate lyase OS=Acidiphilium cryptum (strain JF-5) GN=argH PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.038e-12
Identity = 59/211 (27.96%), Postives = 99/211 (46.92%), Query Frame = -3
Query:  121 RYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQLGVPEQPWHT-----QRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGLVATMFSAM 738
            R ++D +AT   L +R+A + ++  +      LA +A  +  T + G T LQ A PVTLG  +  ++  ++R R RL++ + RL     G A     AL     P+ +++ A   LG      ++      RD  +EF S L ++A  L +   +I ++  +        S     GSS MP KRNP  A +  + A R+ G +  + + M
Sbjct:  120 RSRNDQVATDFRLWVRNAIDSLDGQVRELMRALADRAAEHAATIMPGFTHLQTAQPVTLGHHLLAYVEMLSRDRGRLADARRRLNECPLGAA-----ALAGTTFPIDRSMTAAA-LGFDRPTANSLDSVSDRDFALEFLSALSILAMHLSRFAEEI-IIWTSAPYRFIRLSDAYTTGSSIMPQKRNPDAAELARAKAGRIFGALTGLLAVM 323          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: ARLY2_ANAPL (Argininosuccinate lyase OS=Anas platyrhynchos GN=ASL2 PE=1 SV=4)

HSP 1 Score: 71.2478 bits (173), Expect = 8.038e-12
Identity = 70/257 (27.24%), Postives = 116/257 (45.14%), Query Frame = -3
Query:    1 GRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQ---LGVPEQPWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGLVAT---MFSAMPQEHERSL----GLWHAEWETLPEICRLVSGALHQAQLVSEGLE 741
            GR ++D + T L L ++++  +I   L +    L  +A       L G T LQ A P+     +     A+TR  +RL E+K R+ VL  G  SG LA  G       + L +EL+   + +      ++RD +VEF S   L+   L K+  D+ ++  T        S     GSS MP K+NP    ++ S A RV G +A+   +   +P  + + L           +TL  + ++ +G +   Q+  E +E
Sbjct:  112 GRSRNDQVVTDLKLFMKNSLSIISTHLLQLIKTLVERAAIEIDVILPGYTHLQKAQPIRWSQFLLSHAVALTRDSERLGEVKKRINVLPLG--SGALA--GNPLDIDREMLRSELEFASISLNSMDAISERDFVVEFLSFATLLMIHLSKMAEDL-IIYSTSEFGFLTLSDAFSTGSSLMPQKKNPDSLELIRSKAGRVFGRLASILMVLKGLPSTYNKDLQEDKEAVFDVVDTLTAVLQVATGVISTLQISKENME 363          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: ARLY1_ANAPL (Delta-1 crystallin OS=Anas platyrhynchos GN=ASL1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.038e-12
Identity = 70/257 (27.24%), Postives = 117/257 (45.53%), Query Frame = -3
Query:    1 GRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQ---LGVPEQPWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGLVAT---MFSAMPQEHERSLGLWHAE----WETLPEICRLVSGALHQAQLVSEGLE 741
            GR +++ + T L L ++++  +I   L +    L  +A       L G T LQ A P+     +     A+TR  +RL E+K R+ VL  G  SG LA  G       + L +EL+   + +      ++RD +VEF SV  L+   L K+  D+ ++  T        S     GSS MP K+NP    ++ S A RV G +A+   +   +P  + + L           +TL  + ++ +G +   Q+  E +E
Sbjct:  110 GRSRNEQVVTDLKLFMKNSLSIISTHLLQLIKTLVERAAIEIDVILPGYTHLQKAQPIRWSQFLLSHAVALTRDSERLGEVKKRINVLPLG--SGALA--GNPLDIDREMLRSELEFASISLNSMDAISERDFVVEFLSVATLLLIHLSKMAEDL-IIYSTSEFGFLTLSDAFSTGSSLMPQKKNPDSLELIRSKAGRVFGRLASILMVLKGLPSTYNKDLQEDKEAVIDVVDTLTAVLQVATGVISTLQISKENME 361          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: ARLY_PSE14 (Argininosuccinate lyase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=argH PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.050e-11
Identity = 59/211 (27.96%), Postives = 94/211 (44.55%), Query Frame = -3
Query:  121 GRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQ----LGVPEQPWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGLVATMFSAM 741
            GR ++D +AT + L LR   +LI  ++ R    L  QA+R   T + G T LQ A PVT G  +  W   ++R  +RL + + RL  +  G A     AL     P+ + L  +L     +G       + RD  +EF S   +    L +   ++ L    +   +  P     G SS MP K+NP    ++   + RV G +  + + M
Sbjct:  111 GRSRNDQVATDIRLWLRDEIDLILSEITRLQQGLLGQAEREAETIMPGFTHLQTAQPVTFGHHMLAWFEMLSRDYERLVDCRKRLNRMPLGSA-----ALAGTTYPIDRELTCKLLGFDVVGGNSLDGVSDRDFAIEFCSAASIAMMHLSRFSEELVLWTSAQFQFIDLPDRFCTG-SSIMPQKKNPDVPELVRGKSGRVFGALMGLLTLM 315          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: FUMC_STAAW (Fumarate hydratase class II OS=Staphylococcus aureus (strain MW2) GN=fumC PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.371e-11
Identity = 66/204 (32.35%), Postives = 93/204 (45.59%), Query Frame = -3
Query:  148 SDVMATGLVLQLRSAFEL-IEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGG-ASGT-LAALGEQAMPVAQALAAELQLGVP----EQPWH--TQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAP-GKGGSSTMPHKRNPVGAAVLISAATRVPG 729
            +D   T + + L    E  +E  L    + L  +  ++ +    GRT LQ ATP+ LG +I+GW   + R    LSE K  +L L  GG A GT + A  E    VA  ++     G P    E  +H  T  D +V+    L  +AG L K+  D+  L     A + E S P  + GSS MP K NP    +L   A +V G
Sbjct:  139 NDTFPTAMHVALYQEVETKLEPALKLLRNTLKEKEDKFDSIIKIGRTHLQDATPIKLGQEISGWRYMLDRCEIMLSESKKHILNLAIGGTAVGTGINAHPEFGDKVAHYISE--NTGYPFVSSENKFHALTAHDEVVQLHGTLKALAGDLMKIANDVRWLASGPRAGLAEISIPENEPGSSIMPGKVNPTQCEMLTMVAVQVMG 340          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: FUMC_STAAS (Fumarate hydratase class II OS=Staphylococcus aureus (strain MSSA476) GN=fumC PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.371e-11
Identity = 66/204 (32.35%), Postives = 93/204 (45.59%), Query Frame = -3
Query:  148 SDVMATGLVLQLRSAFEL-IEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGG-ASGT-LAALGEQAMPVAQALAAELQLGVP----EQPWH--TQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAP-GKGGSSTMPHKRNPVGAAVLISAATRVPG 729
            +D   T + + L    E  +E  L    + L  +  ++ +    GRT LQ ATP+ LG +I+GW   + R    LSE K  +L L  GG A GT + A  E    VA  ++     G P    E  +H  T  D +V+    L  +AG L K+  D+  L     A + E S P  + GSS MP K NP    +L   A +V G
Sbjct:  139 NDTFPTAMHVALYQEVETKLEPALKLLRNTLKEKEDKFDSIIKIGRTHLQDATPIKLGQEISGWRYMLDRCEIMLSESKKHILNLAIGGTAVGTGINAHPEFGDKVAHYISE--NTGYPFVSSENKFHALTAHDEVVQLHGTLKALAGDLMKIANDVRWLASGPRAGLAEISIPENEPGSSIMPGKVNPTQCEMLTMVAVQVMG 340          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: ARLY_SYNS9 (Argininosuccinate lyase OS=Synechococcus sp. (strain CC9902) GN=argH PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.371e-11
Identity = 69/253 (27.27%), Postives = 109/253 (43.08%), Query Frame = -3
Query:    1 GRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGAS--GTLAALGEQAMPVAQALAAELQLGVPEQPWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGL---VATMFSAMPQEHERSLGLWHAEWETLPEICRLVSGALH-QAQLVSEGLE 741
            GR ++D + T L L LR   + +E DL R    L AQA  +  T + G T LQ A P+ L   +  ++  + R R RL +++ R+ +   G A+  GT   +  Q    A    A     +      + RD  VEF++   L+   L +L  ++ +   +E       S     GSS MP K+NP    ++     RV G    + TM   +P  + +    +  + E L +  R     +   A L  EGLE
Sbjct:  114 GRSRNDQVGTDLRLWLRRRLDELEGDLQRLQRALVAQADLHRRTMIPGYTHLQRAQPLCLAHHLLAYVEMLERDRLRLHDVRSRVNICPLGAAALAGTPVPIDRQQTAKALGFDAIYANSLDAV---SDRDFCVEFSAAASLVMAHLSRLAEEV-IAWASEEFRFVRLSDRCATGSSLMPQKKNPDVPELVRGKCGRVFGHLQGLLTMIKGLPLAYNKD---FQEDKEALFDAFRTTRDCIEAMAILFEEGLE 359          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: ARLY_PSYCK (Argininosuccinate lyase OS=Psychrobacter cryohalolentis (strain K5) GN=argH PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.371e-11
Identity = 61/214 (28.50%), Postives = 98/214 (45.79%), Query Frame = -3
Query:  112 GRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQ--LGVPEQPWH--TQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGLVATMFSAMPQE 741
            GR ++D +AT + L LR   + I   L R    L   A+++  T + G T LQ A PV+ G  +  W   + R  +RL + + R+  +  G A     AL     P+ + + AEL    G+ +      + RD  +EF S   ++   + ++  +I L M  +   V  P     G SS MP K+NP    ++   A RV G + T+ S M  +
Sbjct:  103 GRSRNDQVATDIRLWLREETDNIIALLVRLQSGLLDLAEQHTDTIMPGFTHLQTAQPVSFGHHVMAWFEMLYRDTERLVDARRRINQMPLGSA-----ALAGTTFPIDRTITAELLGFEGICQNSLDAVSDRDFAIEFTSAASILMMHMSRMSEEIILWMSAQFNFVQIPDRFCTG-SSIMPQKKNPDVPELVRGKAARVFGQLMTLLSLMKSQ 310          
The following BLAST results are available for this feature:
BLAST of EY684547 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
ARLY_STRAW8.038e-1227.85Argininosuccinate lyase OS=Streptomyces avermitili... [more]
ARLY_COLLI8.038e-1227.24Argininosuccinate lyase OS=Columba livia GN=ASL PE... [more]
ARLY_ACICJ8.038e-1227.96Argininosuccinate lyase OS=Acidiphilium cryptum (s... [more]
ARLY2_ANAPL8.038e-1227.24Argininosuccinate lyase OS=Anas platyrhynchos GN=A... [more]
ARLY1_ANAPL8.038e-1227.24Delta-1 crystallin OS=Anas platyrhynchos GN=ASL1 P... [more]
ARLY_PSE141.050e-1127.96Argininosuccinate lyase OS=Pseudomonas syringae pv... [more]
FUMC_STAAW1.371e-1132.35Fumarate hydratase class II OS=Staphylococcus aure... [more]
FUMC_STAAS1.371e-1132.35Fumarate hydratase class II OS=Staphylococcus aure... [more]
ARLY_SYNS91.371e-1127.27Argininosuccinate lyase OS=Synechococcus sp. (stra... [more]
ARLY_PSYCK1.371e-1128.50Argininosuccinate lyase OS=Psychrobacter cryohalol... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-001-D05-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684547 ID=EY684547; Name=EY684547; organism=Citrus sinensis; type=EST; length=851bp
TTCCAGCCCTTCACTCACCAGCTGCGCCTGATGCAATGCACCGGATACCA
GCCGGCAAATTTCCGGCAAGGTTTCCCACTCGGCGTGCCACAGGCCCAGG
CTGCGTTCGTGCTCCTGGGGCATGGCGCTGAACATTGTCGCTACCAGGCC
GGGCACGCGGGTCGCGGCGCTGATCAGCACGGCAGCGCCCACCGGGTTGC
GCTTGTGAGGCATGGTCGAAGAGCCGCCCTTGCCGGGAGCTGAGGGTTCG
AATACTTCCGCCGCTTCGGTCTGCATCAGCAGGCTGATGTCGCGGCCCAG
TTTGCCGAGACTACCGGCGATCAGGCCAAGCACCGAGGCAAACTCCACCA
GACGATCGCGCTGGGTGTGCCAAGGTTGCTCCGGCACGCCAAGCTGCAAC
TCGGCCGCCAAGGCTTGCGCCACCGGCATCGCCTGTTCGCCAAGGGCTGC
CAGGGTTCCGGAAGCACCGCCAAATTGCAGCACCAGCAAACGCGGCTTGA
GTTCACTCAGGCGCTGCCGACTTCGGGTGACTGCGCCGAGCCAGCCGGCG
ATTTTCATGCCCAGGGTGACCGGCGTCGCATGTTGCAGCCACGTCCGGCC
AGCCAAAGGAGTTGTCCCATAACGCTGAGCCTGGGCGGCAAGAATGTCAC
CCCAACGCGCCAGATCGTGTTCGATCAACTCGAACGCGCTGCGCAGTTGC
AGCACCAAGCCGGTGGCCATAACATCTGACTGGTAGCGTCCAAAGGCCAT
TACGCTCCGGGCAAAAATATTCCTGGGGAATGAATTTGCAGAGGGCCTGC
ACAAGGAATCCGCAAATGCGCGCCGGGAGACAGCTTACAGAGGACGGCAC
C
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