EY684547

Overview
NameEY684547
Unique NameEY684547
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: FUMC_MYCTU (Fumarate hydratase class II OS=Mycobacterium tuberculosis GN=fumC PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.210e-11
Identity = 60/175 (34.29%), Postives = 80/175 (45.71%), Query Frame = -3
Query:  148 DILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGG-ASGTLAALGEQ------AMPVAQALAAELQLGVPEQPWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPG-KGGSSTMPHKRNPVGAAVLISAATRVPG 648
            D LAA+A  + T   +GRT L  A PVTLG + +G+   +    +R+    PRL  L  GG A GT     +       A+ VAQ   +EL+           RD LVE +  L  IA SL K+  DI  +       + E   P  + GSS MP K NPV    +   A +V G
Sbjct:  168 DALAAKALDWHTVVKSGRTHLMDAVPVTLGQEFSGYARQIEAGIERVRACLPRLGELAIGGTAVGTGLNAPDDFGVRVVAVLVAQTGLSELRTAANSFEAQAARDGLVEASGALRTIAVSLTKIANDIRWMGSGPLTGLAEIQLPDLQPGSSIMPGKVNPVLPEAVTQVAAQVIG 342          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: FUMC_MYCBO (Fumarate hydratase class II OS=Mycobacterium bovis GN=fumC PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.210e-11
Identity = 60/175 (34.29%), Postives = 80/175 (45.71%), Query Frame = -3
Query:  148 DILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGG-ASGTLAALGEQ------AMPVAQALAAELQLGVPEQPWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPG-KGGSSTMPHKRNPVGAAVLISAATRVPG 648
            D LAA+A  + T   +GRT L  A PVTLG + +G+   +    +R+    PRL  L  GG A GT     +       A+ VAQ   +EL+           RD LVE +  L  IA SL K+  DI  +       + E   P  + GSS MP K NPV    +   A +V G
Sbjct:  168 DALAAKALDWHTVVKSGRTHLMDAVPVTLGQEFSGYARQIEAGIERVRACLPRLGELAIGGTAVGTGLNAPDDFGVRVVAVLVAQTGLSELRTAANSFEAQAARDGLVEASGALRTIAVSLTKIANDIRWMGSGPLTGLAEIQLPDLQPGSSIMPGKVNPVLPEAVTQVAAQVIG 342          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: FUMC_BACSU (Fumarate hydratase class II OS=Bacillus subtilis GN=fumC PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.210e-11
Identity = 60/216 (27.78%), Postives = 93/216 (43.06%), Query Frame = -3
Query:  115 SDVMATGL-VLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQLGVPEQPWH---------TQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAP-GKGGSSTMPHKRNPVGAAVLISAATRVPGLVATMFSAMPQ 729
            +D   T + V  + + +E +   L +  + L  +A+ Y      GRT LQ ATP+TLG +I+GW+  + RS++ + E   ++  L  G   GT    G  A P    L +E    +  Q +          T  D +      L  +A  L K+  D+  L       + E   P  + GSS MP K NP  +  L   A ++ G  AT+  A  Q
Sbjct:  139 NDTFPTAMHVAAVLAVYEQLVPALDQLRNTLDEKAKAYNDIVKIGRTHLQDATPLTLGQEISGWVHMLDRSKEMILEATDKMRALAIG---GTAVGTGINAHPEFGELVSEEITKLTGQTFSSSPNKFHALTSHDEITYAHGALKALAADLMKIANDVRWLASGPRCGIGEIVIPENEPGSSIMPGKVNPTQSEALTMIAAQIMGNDATIGFAASQ 351          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: ARLY_LACC3 (Argininosuccinate lyase OS=Lactobacillus casei (strain ATCC 334) GN=argH PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.210e-11
Identity = 63/245 (25.71%), Postives = 107/245 (43.67%), Query Frame = -3
Query:   31 RYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQLGVPEQPWH------TQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGL---VATMFSAMPQEHERSLGLWHAEWETLPEICRLVSGALH 738
            R ++D +AT L L L+     I+  L     +L  QA+ +  T + G T +QHA P+T G  +  +     R  +R    +    +L  G      AAL     P+ + L A+ +LG  +Q +H      + RD  +EF S   ++   L ++  ++ +L  T      E       GSS MP K+NP  A ++     RV G    + T   A+P  + + +     + E + +    + G+LH
Sbjct:  108 RSRNDQVATDLHLWLKHRLPTIKEALTNLQTVLVGQAKVHAATIMPGYTHMQHAQPITYGHYLLAYFEMFQRDWERFDFTQKHTDILPLGA-----AALAGTTFPIDRTLVAQ-ELGF-DQIYHNSLDAVSDRDFALEFLSNSAILMQHLSRMAEEL-ILWSTYEFNYIELGDDFSTGSSIMPQKKNPDFAELIRGKTGRVYGALMGLLTTMKAIPLAYNKDM---QEDKEPIFDAYNTILGSLH 341          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: ARLY_SYNSC (Argininosuccinate lyase OS=Synechococcus sp. (strain CC9605) GN=argH PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.805e-11
Identity = 66/253 (26.09%), Postives = 109/253 (43.08%), Query Frame = -3
Query:    1 GRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGAS--GTLAALGEQAMPVAQALAAELQLGVPEQPWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGL---VATMFSAMPQEHERSLGLWHAEWETLPEICRLVSGALH-QAQLVSEGLE 741
            GR ++D + T L L LR   + ++ DL R    L  QA R+  T + G T LQ A P+ L   +  ++  + R R+RL + + R+ +   G A+  GT   +  Q        +A     +      + RD  VEF++   L+   L +L  ++ +   +E       S     GSS MP K+NP    ++     RV G    + TM   +P  + +    +  + E L +  R     +   A L  EGL+
Sbjct:  114 GRSRNDQVGTDLRLWLRRRLDGLDQDLQRLQGALLTQADRHRRTMIPGYTHLQRAQPLCLAHHLLAYVEMLERDRERLQDARKRVNICPLGAAALAGTPVPIDRQRTAKELGFSAVYANSLDAV---SDRDFCVEFSAAASLVMVHLSRLAEEV-IAWASEEFGFVRLSDRCATGSSLMPQKKNPDVPELVRGKTGRVFGHLQGLLTMIKGLPLAYNKD---FQEDKEALFDAFRTTRDCVEAMAILFEEGLD 359          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: ARLY_CHLPD (Argininosuccinate lyase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=argH PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 6.805e-11
Identity = 59/211 (27.96%), Postives = 91/211 (43.13%), Query Frame = -3
Query:  121 GRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAEL----QLGVPEQPWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGLVATMFSAM 741
            GR ++D +AT   L LR     ++  +     +L  +A+ Y  T + G T LQ A P++ G     W     R R+RL +L  R+ +   G A     A     +P+  A  AEL     +        + RD L+EF S   ++   L +   D+ L    E   + E S     GSS MP K+N   A ++     RV G + +M + M
Sbjct:  110 GRSRNDQVATDTRLYLRKKIAELQDAVQAMQQMLIGKAETYKETIIFGYTHLQRAQPISAGHYYLAWFSMFRRDRERLRDLLRRVNISPLGAA-----AFAGSTLPLNPARTAELLAFDDIFSNSIDAVSDRDILIEFISACSIMMMHLSRFAEDLILWSSYEFGYL-EISDAFATGSSLMPQKKNADIAELVRGKTGRVYGNLVSMLTIM 314          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: FUMC_MYXXD (Fumarate hydratase class II OS=Myxococcus xanthus (strain DK 1622) GN=fumC PE=3 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 8.887e-11
Identity = 65/211 (30.81%), Postives = 96/211 (45.50%), Query Frame = -3
Query:  148 GRYQSDVMATGL-VLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGG-ASGT-LAALGEQAMPVAQALAAELQLGVPEQPWHT---------QRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAP-GKGGSSTMPHKRNPVGAAVLISAATRVPG 741
            G+  +DV  T + V  + +  E +  +L    D+LA +A+ +      GRT LQ ATP+TLG ++ G++  +  ++  L    P LL L  GG A GT L A    A  VAQ LA      +   P+ T           D LV+    L  +A  L K+  D+  L     + + E + P  + GSS MP K NP  +  L     +V G
Sbjct:  139 GQSSNDVFPTAMSVAAVAAITEHVLPELKALRDVLAQKARAFHDVVKVGRTHLQDATPLTLGQEVGGFVAQLDHAKGHLERTLPHLLELALGGTAVGTGLNAPKGYAERVAQELAQ-----LTGHPFVTAPNKFEALAANDALVQAHGALKGLAAVLFKVANDVRWLSSGPRSGLAEITIPENEPGSSIMPGKVNPTQSEALTMLCAQVMG 344          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: FUMC_COREF (Fumarate hydratase class II OS=Corynebacterium efficiens GN=fumC PE=3 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 8.887e-11
Identity = 57/175 (32.57%), Postives = 79/175 (45.14%), Query Frame = -3
Query:  142 LAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGAS-----GTLAALGEQAMPVAQALAAELQLGVPEQPWHTQ--RDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPG-KGGSSTMPHKRNPVGAAVLISAATRVPGLV 642
            LA +A  + +   +GRT L  A PVTLG +  G+   +    +R+    PRL  L  GG +      T A  G + +     L    QL      +  Q  RD LVEF+  + ++A SL K+  DI L+       + E   P  + GSS MP K NP    VL   AT+V   V
Sbjct:  170 LAKKANEWDSVVKSGRTHLMDAVPVTLGQEFGGYARQIQLGIERIEATLPRLGELAIGGTAVGTGINTSADFGGKVVAELVELTGVTQLQEAANHFEAQANRDALVEFSGAMRVVAVSLYKIANDIRLMGSGPLTGLGEIQLPDLQPGSSIMPGKVNP----VLCETATQVSAQV 340          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: ARLY_STRGG (Argininosuccinate lyase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=argH PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.887e-11
Identity = 58/219 (26.48%), Postives = 96/219 (43.84%), Query Frame = -3
Query:   97 GRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQLGVPEQPWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATR----VPGLVATMFSAMPQEHERSL 741
            GR ++D +AT   + LR     I   +A     L   A+ +    + GRT LQHA PV     +   + +++R  +RL +   R  V  +G  +   ++LG     VA  L  E             RD + EFA +  +I  +L ++  ++ ++  T+             GSS MP K+NP  A +    + R    + GL+AT+  A+P  + R L
Sbjct:  113 GRSRNDQIATLFRMYLRDHARTIGGLIADLQSALVGLAEAHADVAMPGRTHLQHAQPVLFAHHVLAHVQSLSRDAERLRQWDERTAVSPYGSGALAGSSLGLDPQAVAADLGFERGSVANSIDGTASRDFVAEFAFITAMIGVNLSRIAEEV-IIWNTKEFSFVTLHDAFSTGSSIMPQKKNPDIAELARGKSGRLIGNLTGLLATL-KALPLAYNRDL 329          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: ARLY_CHLAD (Argininosuccinate lyase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=argH PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.887e-11
Identity = 57/207 (27.54%), Postives = 89/207 (43.00%), Query Frame = -3
Query:  121 GRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQLGVPEQPWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGLVATMFSAM 741
            GR ++D +AT + L        ++  L      L  QA+ +  T + G T LQ A P+T G     ++    R R RL +   R+ VL  G  +    ALG +   + + L    +L        + RD + E   +  LI   L +L  DI L    E   + E +     GSS MP K+NP    +L   + R+ G V T+ + +
Sbjct:  107 GRSRNDQVATDMRLYTIGIARQLDRRLRDLQLALLTQAELHTDTLMPGYTHLQRAQPITFGHWCLAYIEMFARDRSRLRDAITRMRVLPLGAGALAGNALGIERERLTELLDEFDELAANSLDAVSDRDFVAEILFICALIGIHLSRLAEDIILYASAEFGFI-ELADAYSTGSSLMPQKKNPDSMELLRGKSGRLLGNVVTLLTVL 312          
The following BLAST results are available for this feature:
BLAST of EY684547 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
FUMC_MYCTU5.210e-1134.29Fumarate hydratase class II OS=Mycobacterium tuber... [more]
FUMC_MYCBO5.210e-1134.29Fumarate hydratase class II OS=Mycobacterium bovis... [more]
FUMC_BACSU5.210e-1127.78Fumarate hydratase class II OS=Bacillus subtilis G... [more]
ARLY_LACC35.210e-1125.71Argininosuccinate lyase OS=Lactobacillus casei (st... [more]
ARLY_SYNSC6.805e-1126.09Argininosuccinate lyase OS=Synechococcus sp. (stra... [more]
ARLY_CHLPD6.805e-1127.96Argininosuccinate lyase OS=Chlorobium phaeobactero... [more]
FUMC_MYXXD8.887e-1130.81Fumarate hydratase class II OS=Myxococcus xanthus ... [more]
FUMC_COREF8.887e-1132.57Fumarate hydratase class II OS=Corynebacterium eff... [more]
ARLY_STRGG8.887e-1126.48Argininosuccinate lyase OS=Streptomyces griseus su... [more]
ARLY_CHLAD8.887e-1127.54Argininosuccinate lyase OS=Chloroflexus aggregans ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-001-D05-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684547 ID=EY684547; Name=EY684547; organism=Citrus sinensis; type=EST; length=851bp
TTCCAGCCCTTCACTCACCAGCTGCGCCTGATGCAATGCACCGGATACCA
GCCGGCAAATTTCCGGCAAGGTTTCCCACTCGGCGTGCCACAGGCCCAGG
CTGCGTTCGTGCTCCTGGGGCATGGCGCTGAACATTGTCGCTACCAGGCC
GGGCACGCGGGTCGCGGCGCTGATCAGCACGGCAGCGCCCACCGGGTTGC
GCTTGTGAGGCATGGTCGAAGAGCCGCCCTTGCCGGGAGCTGAGGGTTCG
AATACTTCCGCCGCTTCGGTCTGCATCAGCAGGCTGATGTCGCGGCCCAG
TTTGCCGAGACTACCGGCGATCAGGCCAAGCACCGAGGCAAACTCCACCA
GACGATCGCGCTGGGTGTGCCAAGGTTGCTCCGGCACGCCAAGCTGCAAC
TCGGCCGCCAAGGCTTGCGCCACCGGCATCGCCTGTTCGCCAAGGGCTGC
CAGGGTTCCGGAAGCACCGCCAAATTGCAGCACCAGCAAACGCGGCTTGA
GTTCACTCAGGCGCTGCCGACTTCGGGTGACTGCGCCGAGCCAGCCGGCG
ATTTTCATGCCCAGGGTGACCGGCGTCGCATGTTGCAGCCACGTCCGGCC
AGCCAAAGGAGTTGTCCCATAACGCTGAGCCTGGGCGGCAAGAATGTCAC
CCCAACGCGCCAGATCGTGTTCGATCAACTCGAACGCGCTGCGCAGTTGC
AGCACCAAGCCGGTGGCCATAACATCTGACTGGTAGCGTCCAAAGGCCAT
TACGCTCCGGGCAAAAATATTCCTGGGGAATGAATTTGCAGAGGGCCTGC
ACAAGGAATCCGCAAATGCGCGCCGGGAGACAGCTTACAGAGGACGGCAC
C
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