EY684519

Overview
NameEY684519
Unique NameEY684519
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8796 contig Csv1_Contig8796:1..832. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY684519 vs. ExPASy Swiss-Prot
Match: TYK2_MOUSE (Non-receptor tyrosine-protein kinase TYK2 OS=Mus musculus GN=Tyk2 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 8.604e-11
Identity = 51/152 (33.55%), Postives = 80/152 (52.63%), Query Frame = 3
Query:   15 LHLPNLVAVKGCCYDHGDRYI--VYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVP--WEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS 458
            L+  ++V  KGCC D G++ +  V E+V   PL     ++PR    +  A  +  A  + +G+A+LH +   H +HRD+ A NVLLD +    +   GL+K VP   E  + R       + Y APE +   +    SDV+SFGV L E+++
Sbjct:  947 LYHEHIVKYKGCCEDQGEKSVQLVMEYV---PLGSLRDYLPR--HCVGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKECKFYYASDVWSFGVTLYELLT 1089          
BLAST of EY684519 vs. ExPASy Swiss-Prot
Match: TIE1_MOUSE (Tyrosine-protein kinase receptor Tie-1 OS=Mus musculus GN=Tie1 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 8.604e-11
Identity = 67/241 (27.80%), Postives = 102/241 (42.32%), Query Frame = 3
Query:   18 HLPNLVAVKGCCYDHGDRYIVYEFVVNGPL------DRWLHHIPRGGR------SLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYXXXXXXXXXXXXXXXXXAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQL 701
            H PN++ + G C + G  YI  E+   G L       R L   P   R      +L     ++ A+  A G+ +L +K     +HRD+ A NVL+ E   + +   GLS+    E +  +  M      ++A E +  +  TTKSDV+SFGVLL EIVS G  P       C  +  E    L Q +R                       +V +L+  C +  P  RP  + +  QL ++
Sbjct:  892 HHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAREHGTASTLSSRQLLRFASDAANGMQYLSEK---QFIHRDLAARNVLVGENLASKIADFGLSR---GEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTP------YCGMTCAELYEKLPQGYRMEQPRNCD--------------DEVYELMRQCWRDRPYERPPFAQIALQLGRM 1106          
BLAST of EY684519 vs. ExPASy Swiss-Prot
Match: TIE1_HUMAN (Tyrosine-protein kinase receptor Tie-1 OS=Homo sapiens GN=TIE1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.604e-11
Identity = 67/241 (27.80%), Postives = 102/241 (42.32%), Query Frame = 3
Query:   18 HLPNLVAVKGCCYDHGDRYIVYEFVVNGPL------DRWLHHIPRGGR------SLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYXXXXXXXXXXXXXXXXXAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQL 701
            H PN++ + G C + G  YI  E+   G L       R L   P   R      +L     ++ A+  A G+ +L +K     +HRD+ A NVL+ E   + +   GLS+    E +  +  M      ++A E +  +  TTKSDV+SFGVLL EIVS G  P       C  +  E    L Q +R                       +V +L+  C +  P  RP  + +  QL ++
Sbjct:  896 HHPNIINLLGACKNRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAREHGTASTLSSRQLLRFASDAANGMQYLSEK---QFIHRDLAARNVLVGENLASKIADFGLSR---GEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTP------YCGMTCAELYEKLPQGYRMEQPRNCD--------------DEVYELMRQCWRDRPYERPPFAQIALQLGRM 1110          
BLAST of EY684519 vs. ExPASy Swiss-Prot
Match: SPKA_DICDI (Stress-activated protein kinase alpha OS=Dictyostelium discoideum GN=spkA-1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.604e-11
Identity = 38/113 (33.63%), Postives = 61/113 (53.98%), Query Frame = 3
Query:  120 HHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS 458
            H +      + W    + A    +GI  LH K  P +VHRD+++ N+L+++++   +   GLS+F     + E  V   GT+ Y APE  Y  + + KSDVYS  V+L E+V+
Sbjct:  433 HVMDNNSLDIGWERTFRFAIETVRGIECLH-KWDPPIVHRDLKSLNLLVNDKWEIKVCDFGLSRFNTGSNL-ETLVKMRGTFAYCAPEVYYGEQFSGKSDVYSIAVILWELVT 543          
BLAST of EY684519 vs. ExPASy Swiss-Prot
Match: RIPK3_MOUSE (Receptor-interacting serine/threonine-protein kinase 3 OS=Mus musculus GN=Ripk3 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.604e-11
Identity = 49/144 (34.03%), Postives = 75/144 (52.08%), Query Frame = 3
Query:   75 IVYEFVVNGPLDRWLH-HIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVM----AGGTYGYLAPEFVYRNEL--TTKSDVYSFGVLLLEIVSGRRPAQAVD 485
            +V  F+ NG L   L    PR      W +  ++   +  G+ +LH  + P ++HRD++ SN+LLD E  A L   GLS F         +      +GGT  YL PE +++  L  +  SDVYSFG+L+  +++GR  A+ VD
Sbjct:   93 LVTRFMENGSLAGLLQPECPR-----PWPLLCRLLQEVVLGMCYLHS-LDPPLLHRDLKPSNILLDPELHAKLADFGLSTFQGGSQSGSGSGSGSRDSGGTLAYLDPELLFKVNLKASKASDVYSFGILVWAVLAGRE-AELVD 229          
BLAST of EY684519 vs. ExPASy Swiss-Prot
Match: MKK1_YEAST (MAP kinase kinase MKK1/SSP32 OS=Saccharomyces cerevisiae GN=MKK1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.604e-11
Identity = 43/137 (31.39%), Postives = 73/137 (53.28%), Query Frame = 3
Query:   72 YIVYEFVVNGPLDR-WLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQA 479
            YI  E++    LD  + + + RGGR  +  +  K+A  + +G+++LH+K    V+HRDI+  N+LL+E     L   G+S     E +        GT  Y+APE +     +  SDV+S G+ +LE+ +G+ P  +
Sbjct:  296 YIAMEYMGGRSLDAIYKNLLERGGRISEKVLG-KIAEAVLRGLSYLHEK---KVIHRDIKPQNILLNENGQVKLCDFGVSG----EAVNSLATTFTGTSFYMAPERIQGQPYSVTSDVWSLGLTILEVANGKFPCSS 424          
BLAST of EY684519 vs. ExPASy Swiss-Prot
Match: IRAK3_MOUSE (Interleukin-1 receptor-associated kinase 3 OS=Mus musculus GN=Irak3 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 8.604e-11
Identity = 40/133 (30.08%), Postives = 72/133 (54.14%), Query Frame = 3
Query:   75 IVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV-MAGGT---YGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSG 461
            +VY ++ NG L   L     G   L W +R+ V   +A+ I +LH+     V+  ++ ++N+LLD++    L     + F P    Q  T+ M GG      Y+  E++ +  L+ K+DVYSFG++++E+++G
Sbjct:  252 LVYPYMSNGTLFDRLQ-CTNGTTPLSWHVRISVLIGIAKAIQYLHNTQPCAVICGNVSSANILLDDQLQPKLTDFAAAHFRPNLEQQSSTINMTGGGRKHLWYMPEEYIRQGRLSVKTDVYSFGIVIMEVLTG 383          
BLAST of EY684519 vs. ExPASy Swiss-Prot
Match: AMHR2_RABIT (Anti-Muellerian hormone type-2 receptor OS=Oryctolagus cuniculus GN=AMHR2 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.604e-11
Identity = 42/126 (33.33%), Postives = 67/126 (53.17%), Query Frame = 3
Query:  150 DWAMRMKVATTLAQGIAFLHDK------VKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVP-------WEVMQER---TVMAGGTYGYLAPEFVYRN-------ELTTKSDVYSFGVLLLEIVS 458
            DW   +++A +LAQG+AFLH++       KP + HRD+ + NVL+ E+    +  +GL+  +P       W   Q R    +M  GT  Y+APE + ++           ++DVYS  +LL EI+S
Sbjct:  295 DWGSSLRMALSLAQGLAFLHEERWQDGQYKPGIAHRDLSSQNVLIREDGSCAIGDLGLALVLPGFAQPRAWAPPQPRGPAAIMEAGTQRYMAPELLDKSLDLQDWGTALRRADVYSLALLLWEILS 420          
The following BLAST results are available for this feature:
BLAST of EY684519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
TYK2_MOUSE8.604e-1133.55Non-receptor tyrosine-protein kinase TYK2 OS=Mus m... [more]
TIE1_MOUSE8.604e-1127.80Tyrosine-protein kinase receptor Tie-1 OS=Mus musc... [more]
TIE1_HUMAN8.604e-1127.80Tyrosine-protein kinase receptor Tie-1 OS=Homo sap... [more]
SPKA_DICDI8.604e-1133.63Stress-activated protein kinase alpha OS=Dictyoste... [more]
RIPK3_MOUSE8.604e-1134.03Receptor-interacting serine/threonine-protein kina... [more]
MKK1_YEAST8.604e-1131.39MAP kinase kinase MKK1/SSP32 OS=Saccharomyces cere... [more]
IRAK3_MOUSE8.604e-1130.08Interleukin-1 receptor-associated kinase 3 OS=Mus ... [more]
AMHR2_RABIT8.604e-1133.33Anti-Muellerian hormone type-2 receptor OS=Oryctol... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-001-A08-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684519 ID=EY684519; Name=EY684519; organism=Citrus sinensis; type=EST; length=832bp
CCACGCGTCCGAGGCTTCATCTTCCAAATTTGGTGGCTGTAAAGGGATGC
TGCTATGATCACGGTGACCGCTATATTGTTTATGAGTTTGTAGTCAACGG
CCCCTTAGACAGATGGCTACACCACATACCAAGGGGAGGGCGGAGCTTGG
ATTGGGCGATGCGAATGAAAGTTGCTACAACCCTTGCTCAGGGAATTGCG
TTCTTGCATGACAAGGTTAAGCCACATGTTGTGCATCGGGATATTCGTGC
CAGTAATGTATTGCTTGATGAAGAGTTTGGCGCACATTTGATGGGGGTTG
GTCTTTCAAAGTTTGTGCCATGGGAAGTGATGCAAGAGAGGACAGTGATG
GCTGGTGGCACATATGGATACCTCGCTCCTGAATTTGTATATAGAAATGA
GCTTACAACAAAAAGTGACGTTTACAGCTTCGGAGTACTGCTGCTGGAAA
TTGTAAGTGGTCGTAGACCTGCACAAGCTGTTGATTCTGTTTGTTGGCAA
AGTATATTTGAATGGGCCACACCTTTGGTGCAATCACATCGCTACCTTGA
GCTCTTGGATCCTATCATATCTTCTTCGTCCTCTGATATTCCAGAAGCTG
GTGTTGTGCAGAAGGTGGTGGACCTTGTATACGCTTGTACACAGCATGTC
CCTTCTATGCGCCCAAGAATGTCTCATGTTGTTCATCAGCTGCAACAATT
GGGCCAGCCACCTGTCACAAAGTAAGTTTTGCAATCTCAAGCTCTGGGGT
ATTTGCAATACTAACTATAAGAAAAGTGGCAATTTGAGTTTCCCCTGTTG
AGGGCTTGCTGGTATTTTGGCGGATCCCATAC
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