EY684498

Overview
NameEY684498
Unique NameEY684498
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length994
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684498 vs. ExPASy Swiss-Prot
Match: XTH18_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 18 OS=Arabidopsis thaliana GN=XTH18 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.597e-33
Identity = 61/129 (47.29%), Postives = 89/129 (68.99%), Query Frame = 1
Query:  166 TFLEDFKVTWSDAHLR-QIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDKEQRVNLWFDPAADYHLYPILWKP 549
            +F +D ++ W D   + +   G+ + L LD++SG GF S +++L+G+  +++KLVPG+SAGTVT FY+ S      DE+DFEFLGN +G PYT+ TN+Y  G GDKEQ+ +LWFDP  ++H Y I W P
Sbjct:   28 SFHKDVQIHWGDGRGKVRDRDGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKS-PGTTWDEIDFEFLGNLSGHPYTLHTNVYTKGSGDKEQQFHLWFDPTVNFHTYCITWNP 155          

HSP 2 Score: 26.9498 bits (58), Expect = 1.597e-33
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 2
Query:  545 NLHHIVFYVDDVPIRGYKNS 604
            N   I+F VD +PIR +KNS
Sbjct:  154 NPQRIIFTVDGIPIREFKNS 173          
BLAST of EY684498 vs. ExPASy Swiss-Prot
Match: XTH19_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 19 OS=Arabidopsis thaliana GN=XTH19 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.710e-33
Identity = 63/129 (48.84%), Postives = 90/129 (69.77%), Query Frame = 1
Query:  166 TFLEDFKVTWSDAHLRQIEG-GRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDKEQRVNLWFDPAADYHLYPILWKP 549
            +F +D K+ W D   +  +  G+ + L LD++SG GF S +++L+G+  +++KLVPG+SAGTVT FY+ S      DE+DFEFLGN +G PYT+ TN+Y  G GDKEQ+ +LWFDP A++H Y I W P
Sbjct:   23 SFHKDVKIHWGDGRGKIHDNQGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKS-PGTTWDEIDFEFLGNISGHPYTLHTNVYTKGSGDKEQQFHLWFDPTANFHTYCITWNP 150          

HSP 2 Score: 23.8682 bits (50), Expect = 2.710e-33
Identity = 16/55 (29.09%), Postives = 28/55 (50.91%), Query Frame = 2
Query:  545 NLHHIVFYVDDVPIRGYKNSWKGS--FSHEPPHGGVYFNPWGKPKEWGTKRVVQK 703
            N   I+F VD +PIR + N+      F  + P   +Y + W + + W T+  ++K
Sbjct:  149 NPQRIIFTVDGIPIREFMNAESRGVPFPTKQPM-RLYASLW-EAEHWATRGGLEK 201          
BLAST of EY684498 vs. ExPASy Swiss-Prot
Match: XTH1_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thaliana GN=XTH1 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.591e-33
Identity = 61/127 (48.03%), Postives = 88/127 (69.29%), Query Frame = 1
Query:  169 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDKEQRVNLWFDPAADYHLYPILWKP 549
            F +++ VTW   ++ ++  G+ +QL LD +SG GF SK  Y  G   ++IK+ P D++G VTAFY+ S   N  DE+DFEFLGN+ G+   VQTN++ NGKG++EQ++ LWFDP+ D+H Y ILW P
Sbjct:   39 FDDNYVVTWGQNNVLKLNQGKEVQLSLDHSSGSGFESKNHYESGFFQIRIKVPPKDTSGVVTAFYLTSK-GNTHDEVDFEFLGNKEGK-LAVQTNVFTNGKGNREQKLALWFDPSKDFHTYAILWNP 163          

HSP 2 Score: 29.261 bits (64), Expect = 4.591e-33
Identity = 14/47 (29.79%), Postives = 24/47 (51.06%), Query Frame = 2
Query:  545 NLHHIVFYVDDVPIRGYKNSWKGSFSHEPPHGGVYFNPWGKPKEWGT 685
            N + IV YVD++P+R +KN+     ++      V  + W   + W T
Sbjct:  162 NPYQIVLYVDNIPVRVFKNTTSQGMNYPSKPMQVVVSLW-NGENWAT 207          
BLAST of EY684498 vs. ExPASy Swiss-Prot
Match: XTH17_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 17 OS=Arabidopsis thaliana GN=XTH17 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.015e-32
Identity = 61/129 (47.29%), Postives = 88/129 (68.22%), Query Frame = 1
Query:  166 TFLEDFKVTWSDAHLR-QIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDKEQRVNLWFDPAADYHLYPILWKP 549
            +F +D ++ W D   +     G+ + L LD++SG GF S +++L+G+  +++KLVPG+SAGTVT FY+ S      DE+DFEFLGN +G PYT+ TN+Y  G GDKEQ+ +LWFDP  ++H Y I W P
Sbjct:   28 SFHKDVQIHWGDGRGKIHDRDGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKS-PGTTWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTVNFHTYCITWNP 155          

HSP 2 Score: 25.409 bits (54), Expect = 1.015e-32
Identity = 10/19 (52.63%), Postives = 13/19 (68.42%), Query Frame = 2
Query:  545 NLHHIVFYVDDVPIRGYKN 601
            N   I+F VD +PIR +KN
Sbjct:  154 NPQRIIFTVDGIPIREFKN 172          
BLAST of EY684498 vs. ExPASy Swiss-Prot
Match: XTH28_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 28 OS=Arabidopsis thaliana GN=XTH28 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.121e-27
Identity = 59/132 (44.70%), Postives = 78/132 (59.09%), Query Frame = 1
Query:  169 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNT--ENVRDELDFEFLGNRTGQPYTVQTNIYANGKG--DKEQRVNLWFDPAADYHLYPILWKPS 552
            F E +   + D +L     G++++L LD+ +G GF S   YL G  S  IKL    SAG V AFY+++    E   DE+DFEFLGN  G+ + +QTNIY NG     +E+R NLWFDP  D+H Y ILW  S
Sbjct:   31 FDEGYTQLFGDQNLIVHRDGKSVRLTLDERTGSGFVSNDIYLHGFFSSSIKLPADYSAGVVIAFYLSNGDLYEKNHDEIDFEFLGNIRGREWRIQTNIYGNGSTHLGREERYNLWFDPTEDFHQYSILWSLS 162          

HSP 2 Score: 33.113 bits (74), Expect = 1.121e-27
Identity = 21/49 (42.86%), Postives = 26/49 (53.06%), Query Frame = 2
Query:  545 NLHHIVFYVDDVPIRGYKN--SWKGSFSHEPPHGGVYFNPWGKPKEWGT 685
            +L HI+FYVD+VPIR  K   S  G F  +P    +Y   W   K W T
Sbjct:  160 SLSHIIFYVDNVPIREVKRTASMGGDFPAKPM--SLYSTIWDGSK-WAT 205          
BLAST of EY684498 vs. ExPASy Swiss-Prot
Match: XTH31_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 31 OS=Arabidopsis thaliana GN=XTH31 PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.463e-27
Identity = 55/135 (40.74%), Postives = 79/135 (58.52%), Query Frame = 1
Query:  169 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENV--RDELDFEFLGNRTGQPYTVQTNIYANGKGD-----KEQRVNLWFDPAADYHLYPILWKPS 552
            F  +F+  W   H R+ +    + L LD+++G GF S R Y  G     IKL PG +AG  T+ Y+++N E+    DE+D EFLG   G+PY++QTN++  G GD     +E +  LWFDP  D+H Y ILW P+
Sbjct:   39 FDREFRTLWGSQHQRREQD--VVTLWLDKSTGSGFKSLRPYRSGYFGASIKLQPGFTAGVDTSLYLSNNQEHPGDHDEVDIEFLGTTPGKPYSLQTNVFVRGSGDRNVIGREMKFTLWFDPTQDFHHYAILWNPN 171          

HSP 2 Score: 32.3426 bits (72), Expect = 1.463e-27
Identity = 19/48 (39.58%), Postives = 25/48 (52.08%), Query Frame = 2
Query:  545 NLHHIVFYVDDVPIRGYKNSWKGSFSHEPPHGGVYFNPWGKPKEWGTK 688
            N + IVF+VDDVPIR Y    +  F   P    VY + W    +W T+
Sbjct:  169 NPNQIVFFVDDVPIRTYNRKNEAIFPTRPM--WVYGSIW-DASDWATE 213          
BLAST of EY684498 vs. ExPASy Swiss-Prot
Match: XTH27_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 27 OS=Arabidopsis thaliana GN=XTH27 PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 4.190e-27
Identity = 59/133 (44.36%), Postives = 79/133 (59.40%), Query Frame = 1
Query:  166 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNT--ENVRDELDFEFLGNRTGQPYTVQTNIYANGK--GDKEQRVNLWFDPAADYHLYPILWKPS 552
            +F E +   + D +L   + G++++L LD+ +G GF S   YL G  S  IKL    +AG V AFYM++    E   DE+DFEFLGN   + + VQTNIY NG     +E+R NLWFDP  D+H Y ILW  S
Sbjct:   30 SFEESYTQLFGDKNLFVHQDGKSVRLTLDERTGSGFVSNDYYLHGFFSASIKLPSDYTAGVVVAFYMSNGDMYEKNHDEIDFEFLGNIREKEWRVQTNIYGNGSTHSGREERYNLWFDPTEDFHQYSILWSDS 162          

HSP 2 Score: 29.261 bits (64), Expect = 4.190e-27
Identity = 18/46 (39.13%), Postives = 25/46 (54.35%), Query Frame = 2
Query:  554 HIVFYVDDVPIRGYKNSWK--GSFSHEPPHGGVYFNPWGKPKEWGT 685
            HI+F+VD+VPIR  K + +  G F  +P    +Y   W   K W T
Sbjct:  163 HIIFFVDNVPIREVKRTAEMGGHFPSKPM--SLYTTIWDGSK-WAT 205          
BLAST of EY684498 vs. ExPASy Swiss-Prot
Match: XTH32_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 32 OS=Arabidopsis thaliana GN=XTH32 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 9.934e-26
Identity = 55/134 (41.04%), Postives = 77/134 (57.46%), Query Frame = 1
Query:  169 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTEN--VRDELDFEFLGNRTGQPYTVQTNIYANGKGD-----KEQRVNLWFDPAADYHLYPILWKP 549
            F + F+  W   H R  +   A+ + LD+ SG GF S + +  G     IKL PG +AG +T+ Y+++N  +    DE+D EFLG   G+PYT+QTN+Y  G GD     +E +  LWFDP  D+H Y ILW P
Sbjct:   43 FYKGFRNLWGPQHQRMDQN--ALTIWLDRTSGSGFKSVKPFRSGYFGANIKLQPGYTAGVITSLYLSNNEAHPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIIGREMKFRLWFDPTKDFHHYAILWSP 174          

HSP 2 Score: 26.5646 bits (57), Expect = 9.934e-26
Identity = 11/25 (44.00%), Postives = 14/25 (56.00%), Query Frame = 2
Query:  557 IVFYVDDVPIRGYKNSWKGSFSHEP 631
            I+F VDD+PIR Y      +F   P
Sbjct:  177 IIFLVDDIPIRRYPKKSASTFPLRP 201          
BLAST of EY684498 vs. ExPASy Swiss-Prot
Match: XTH30_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS=Arabidopsis thaliana GN=XTH30 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 3.964e-24
Identity = 55/132 (41.67%), Postives = 76/132 (57.58%), Query Frame = 1
Query:  166 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNT--ENVRDELDFEFLGNRTGQPYTVQTNIYANGK--GDKEQRVNLWFDPAADYHLYPILWKP 549
            +F E     + DA+L +     +++L+LD+ +G GF S   Y  G  S  IKL    +AG V AFY ++    E   DELD EFLGN  G+P+  QTN+Y NG     +E+R  LWFDP+ ++H Y ILW P
Sbjct:   31 SFEESLSPLFGDANLVRSPDDLSVRLLLDRYTGSGFISSNMYQHGFYSSMIKLPADYTAGVVVAFYTSNGDVFEKTHDELDIEFLGNIKGKPWRFQTNLYGNGSTHRGREERYRLWFDPSKEFHRYSILWTP 162          

HSP 2 Score: 26.9498 bits (58), Expect = 3.964e-24
Identity = 10/13 (76.92%), Postives = 12/13 (92.31%), Query Frame = 2
Query:  551 HHIVFYVDDVPIR 589
            H I+F+VDDVPIR
Sbjct:  163 HKIIFWVDDVPIR 175          
BLAST of EY684498 vs. ExPASy Swiss-Prot
Match: XTH29_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 29 OS=Arabidopsis thaliana GN=XTH29 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.502e-23
Identity = 55/135 (40.74%), Postives = 79/135 (58.52%), Query Frame = 1
Query:  160 PATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVR--DELDFEFLGNRTGQPYTVQTNIYANGKGD--KEQRVNLWFDPAADYHLYPILWKPS 552
            P  F E     + + +L +    R+++L+LD+ +G GF S   Y  G  S  IKL    +AG V AFY ++    V+  DELD EFLGN  G+P+  QTN+Y NG  +  +E+R  LWFDP+ ++H Y ILW P+
Sbjct:   37 PIFFDEGLSHLFGEGNLIRSPDDRSVRLLLDKYTGSGFISSSMYQHGFFSSLIKLPGAYTAGIVVAFYTSNGDVFVKDHDELDIEFLGNLEGKPWRFQTNMYGNGSTNRGREERYRLWFDPSKEFHRYSILWTPT 171          

HSP 2 Score: 26.1794 bits (56), Expect = 2.502e-23
Identity = 16/45 (35.56%), Postives = 21/45 (46.67%), Query Frame = 2
Query:  557 IVFYVDDVPIRGY--KNSWKGSFSHEPPHGGVYFNPWGKPKEWGT 685
            I+F+VDDVPIR    K    G +  +P    +Y   W     W T
Sbjct:  173 IIFWVDDVPIREILRKEEMNGDYPQKPM--SLYATIW-DASSWAT 214          
The following BLAST results are available for this feature:
BLAST of EY684498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
XTH18_ARATH1.597e-3347.29Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH19_ARATH2.710e-3348.84Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH1_ARATH4.591e-3348.03Putative xyloglucan endotransglucosylase/hydrolase... [more]
XTH17_ARATH1.015e-3247.29Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH28_ARATH1.121e-2744.70Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH31_ARATH1.463e-2740.74Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH27_ARATH4.190e-2744.36Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH32_ARATH9.934e-2641.04Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH30_ARATH3.964e-2441.67Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH29_ARATH2.502e-2340.74Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-055-G05-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684498 ID=EY684498; Name=EY684498; organism=Citrus sinensis; type=EST; length=994bp
TACATAACCACAACATATAATTAAAGTTCTCTTTCTAATTAGTAACAGAT
AATATTTTATTGTACGGCTTGTTTTACAGCTATGGCTATCCTAAGAAATG
CAATAGCATTATTTGTGTTGCTTTACTGTCTTGTATCCTGCTCTTGCGTT
TTAGGGCGACCGGCTACTTTTCTTGAGGATTTTAAAGTCACATGGTCCGA
TGCCCATCTCAGGCAAATCGAGGGAGGGAGGGCCATCCAGCTAGTTCTAG
ACCAAAATTCAGGATGTGGGTTTGCTTCCAAAAGGCAGTACTTGTTCGGG
CGTGTAAGCATGAAGATCAAGCTCGTTCCTGGAGACTCTGCTGGAACTGT
CACTGCATTTTATATGAATTCCAACACCGAAAATGTGAGAGACGAGCTTG
ATTTTGAGTTCCTGGGAAACCGAACGGGTCAGCCTTACACGGTCCAGACC
AATATCTATGCAAATGGAAAAGGCGATAAAGAACAGAGAGTGAACCTCTG
GTTTGACCCTGCTGCAGATTATCACCTTTACCCTATTCTCTGGAAACCTT
CACCATATTGTCTTCTATGTGGATGATGTGCCCATCCGGGGTTACAAAAA
CAGTTGGAAAGGCTCCTTTTCCCATGAACCACCCCATGGGGGGGTGTATT
TCAACCCTTGGGGGAAACCAAAAGAATGGGGCACAAAAAGGGTGGTCCAA
AAAAAAAAAAAATTGGGAGCCAAGCCTCCCTTTTTTTTTGCTTATTTCAA
AAAATTTTTAATTTTTGGGGGGTGGCCCCTTTCCCGGGACACACCAAACT
GGGCCTCCCAACCCCCGGAAAACGGGGGGGGGGAGGAAAAAAATTTTTTC
ACCCCCCCCCCCCGCCCTGGGAAAACACAAAAAAAAAAAAAACAAAGGGG
GGTTCCTTTCCCCCCCCCCCCCGAGGATTTTTGAAATTTTTATTGCGCGC
GGGGAGAAAAAACACCCAAAAAAAACCCCCCCCGCACCCCCCCC
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